FFCP PHASE1:Hg19::chr1:209928917..209928938,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80342 | |EntrezGene=80342 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30766 | |HGNC=30766 | ||
|TSSclassifier=strong | |||
|UniProt=E2QRE5 | |UniProt=E2QRE5 | ||
|association_with_transcript=-438bp_to_ENST00000400959_5end | |association_with_transcript=-438bp_to_ENST00000400959_5end | ||
|cluster_id=chr1:209928917..209928938,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_12_at_TRAF3IP3_5end | |description=CAGE_peak_12_at_TRAF3IP3_5end | ||
|id=chr1:209928917..209928938,+ | |id=chr1:209928917..209928938,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.24e-101!42;CL:0000860!1.27e-94!45;CL:0002194!1.84e-65!63;CL:0000576!1.84e-65!63;CL:0000040!1.84e-65!63;CL:0000559!1.84e-65!63;CL:0002009!2.29e-63!65;CL:0000839!1.20e-58!70;CL:0000557!8.82e-58!71;CL:0000766!8.65e-54!76;CL:0000763!1.85e-35!112;CL:0000049!1.85e-35!112;CL:0002087!3.61e-33!119;CL:0002031!1.09e-31!124;CL:0000738!1.17e-27!140;CL:0002032!6.59e-23!165;CL:0000837!6.59e-23!165;CL:0000037!8.02e-22!172;CL:0000566!8.02e-22!172;CL:0000988!2.05e-20!182;CL:0000134!2.10e-08!358;CL:0002320!3.66e-08!365;CL:0000219!2.61e-07!390;CL:0000034!8.86e-07!444 | |ontology_enrichment_celltype=CL:0002057!1.24e-101!42;CL:0000860!1.27e-94!45;CL:0002194!1.84e-65!63;CL:0000576!1.84e-65!63;CL:0000040!1.84e-65!63;CL:0000559!1.84e-65!63;CL:0002009!2.29e-63!65;CL:0000839!1.20e-58!70;CL:0000557!8.82e-58!71;CL:0000766!8.65e-54!76;CL:0000763!1.85e-35!112;CL:0000049!1.85e-35!112;CL:0002087!3.61e-33!119;CL:0002031!1.09e-31!124;CL:0000738!1.17e-27!140;CL:0002032!6.59e-23!165;CL:0000837!6.59e-23!165;CL:0000037!8.02e-22!172;CL:0000566!8.02e-22!172;CL:0000988!2.05e-20!182;CL:0000134!2.10e-08!358;CL:0002320!3.66e-08!365;CL:0000219!2.61e-07!390;CL:0000034!8.86e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.56e-74;33!CL:0002057;5.56e-74;33!CL:0000473;4.40e-53;39!CL:0000234;4.40e-53;39!CL:0000576;1.70e-32;48!CL:0000766;8.81e-20;69!CL:0002087;3.82e-14;104!CL:0000763;8.47e-14;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.18e-64,42;CL:0002057,1.18e-64,42;CL:0000473,2.14e-56,48;CL:0000234,2.14e-56,48;CL:0002194,7.93e-45,59;CL:0000576,7.93e-45,59;CL:0000040,7.93e-45,59;CL:0000559,7.93e-45,59;CL:0002009,2.47e-43,61;CL:0000839,5.48e-40,66;CL:0000557,2.23e-39,67;CL:0000766,1.41e-36,72;CL:0000763,5.66e-24,108;CL:0000049,5.66e-24,108;CL:0002087,1.99e-22,115;CL:0002031,1.97e-21,120;CL:0000738,9.84e-19,136;CL:0002032,1.41e-15,161;CL:0000837,1.41e-15,161;CL:0000037,7.38e-15,168;CL:0000988,5.11e-14,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.76e-45;42!CL:0000049;1.76e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.97e-51!80;UBERON:0001474!3.51e-47!86;UBERON:0004765!1.08e-39!101;UBERON:0001434!1.08e-39!101;UBERON:0002390!2.86e-39!102;UBERON:0003061!2.86e-39!102;UBERON:0002193!1.85e-35!112;UBERON:0002405!1.91e-34!115;UBERON:0002204!1.37e-22!167;UBERON:0003081!1.35e-16!216;UBERON:0002384!7.81e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.35e-34,76;UBERON:0001474,5.53e-32,82;UBERON:0004765,4.93e-29,90;UBERON:0002405,4.68e-28,93;UBERON:0002390,1.47e-26,98;UBERON:0003061,1.47e-26,98;UBERON:0001434,5.31e-26,100;UBERON:0002193,5.66e-24,108;UBERON:0002204,5.87e-15,167;UBERON:0003081,5.31e-12,203;UBERON:0000926,4.55e-07,315;UBERON:0004120,4.55e-07,315;UBERON:0006603,4.55e-07,315 | |||
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|short_description=p12@TRAF3IP3 | |short_description=p12@TRAF3IP3 | ||
}} | }} |
Latest revision as of 20:43, 24 September 2015
Short description: | p12@TRAF3IP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TRAF3IP3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -438bp_to_ENST00000400959_5end |
EntrezGene: | TRAF3IP3 |
HGNC: | 30766 |
UniProt: | E2QRE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.18e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.18e-64 | 42 |
defensive cell | 2.14e-56 | 48 |
phagocyte | 2.14e-56 | 48 |
monopoietic cell | 7.93e-45 | 59 |
monocyte | 7.93e-45 | 59 |
monoblast | 7.93e-45 | 59 |
promonocyte | 7.93e-45 | 59 |
macrophage dendritic cell progenitor | 2.47e-43 | 61 |
myeloid lineage restricted progenitor cell | 5.48e-40 | 66 |
granulocyte monocyte progenitor cell | 2.23e-39 | 67 |
myeloid leukocyte | 1.41e-36 | 72 |
myeloid cell | 5.66e-24 | 108 |
common myeloid progenitor | 5.66e-24 | 108 |
nongranular leukocyte | 1.99e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.97e-21 | 120 |
leukocyte | 9.84e-19 | 136 |
hematopoietic oligopotent progenitor cell | 1.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.41e-15 | 161 |
hematopoietic stem cell | 7.38e-15 | 168 |
hematopoietic cell | 5.11e-14 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.35e-34 | 76 |
bone element | 5.53e-32 | 82 |
skeletal element | 4.93e-29 | 90 |
immune system | 4.68e-28 | 93 |
hematopoietic system | 1.47e-26 | 98 |
blood island | 1.47e-26 | 98 |
skeletal system | 5.31e-26 | 100 |
hemolymphoid system | 5.66e-24 | 108 |
musculoskeletal system | 5.87e-15 | 167 |
lateral plate mesoderm | 5.31e-12 | 203 |
mesoderm | 4.55e-07 | 315 |
mesoderm-derived structure | 4.55e-07 | 315 |
presumptive mesoderm | 4.55e-07 | 315 |