FFCP PHASE1:Hg19::chr5:136649590..136649633,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6695 | |EntrezGene=6695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11251 | |HGNC=11251 | ||
|TSSclassifier=strong | |||
|UniProt=D6RFX3 | |UniProt=D6RFX3 | ||
|association_with_transcript=-363bp_to_ENST00000510405_5end | |association_with_transcript=-363bp_to_ENST00000510405_5end | ||
|cluster_id=chr5:136649590..136649633,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_14_at_SPOCK1_5end | |description=CAGE_peak_14_at_SPOCK1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.33e-118;3 | |ontology_enrichment_development_v019=UBERON:0006215;2.33e-118;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p14@SPOCK1 | |short_description=p14@SPOCK1 | ||
}} | }} |
Latest revision as of 20:41, 24 September 2015
Short description: | p14@SPOCK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SPOCK1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -363bp_to_ENST00000510405_5end |
EntrezGene: | SPOCK1 |
HGNC: | 11251 |
UniProt: | D6RFX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.15e-60 | 6 |
rhombic lip | 8.15e-60 | 6 |
segmental subdivision of hindbrain | 4.61e-53 | 12 |
hindbrain | 4.61e-53 | 12 |
presumptive hindbrain | 4.61e-53 | 12 |
segmental subdivision of nervous system | 4.63e-49 | 13 |
posterior neural tube | 1.18e-42 | 15 |
chordal neural plate | 1.18e-42 | 15 |
regional part of metencephalon | 2.91e-40 | 9 |
metencephalon | 2.91e-40 | 9 |
future metencephalon | 2.91e-40 | 9 |
vagina | 3.30e-40 | 1 |
medulla oblongata | 1.83e-14 | 3 |
myelencephalon | 1.83e-14 | 3 |
future myelencephalon | 1.83e-14 | 3 |
regional part of nervous system | 1.93e-12 | 53 |
regional part of brain | 1.93e-12 | 53 |
neural tube | 7.99e-12 | 56 |
neural rod | 7.99e-12 | 56 |
future spinal cord | 7.99e-12 | 56 |
neural keel | 7.99e-12 | 56 |
brain | 9.44e-10 | 68 |
future brain | 9.44e-10 | 68 |
adult organism | 2.58e-09 | 114 |
central nervous system | 2.54e-08 | 81 |
neural plate | 2.54e-08 | 82 |
presumptive neural plate | 2.54e-08 | 82 |
neurectoderm | 5.76e-08 | 86 |
brainstem | 6.78e-08 | 6 |
nervous system | 1.45e-07 | 89 |