FFCP PHASE1:Hg19::chr9:123970052..123970086,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2934 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4620 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000373823,ENST00000434663_5end | |||
|cluster_id=chr9:123970052..123970086,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_17_at_GSN_5end | |||
|id=chr9:123970052..123970086,+ | |||
|ontology_enrichment_celltype=CL:0002087!4.53e-65!119;CL:0000738!4.79e-65!140;CL:0002057!2.39e-61!42;CL:0002031!9.76e-60!124;CL:0000860!2.63e-56!45;CL:0002009!1.01e-55!65;CL:0002194!1.72e-55!63;CL:0000576!1.72e-55!63;CL:0000040!1.72e-55!63;CL:0000559!1.72e-55!63;CL:0002032!6.14e-50!165;CL:0000837!6.14e-50!165;CL:0000037!7.72e-50!172;CL:0000566!7.72e-50!172;CL:0000557!1.15e-49!71;CL:0000766!1.46e-49!76;CL:0000839!2.25e-48!70;CL:0000988!9.22e-46!182;CL:0000763!6.30e-36!112;CL:0000049!6.30e-36!112;CL:0000945!4.05e-27!24;CL:0000826!4.05e-27!24;CL:0000236!5.60e-19!14;CL:0000838!1.58e-12!52;CL:0000542!3.67e-12!53;CL:0000051!3.67e-12!53;CL:0000134!6.37e-12!358;CL:0002393!2.24e-11!9;CL:0002397!2.24e-11!9;CL:0002320!2.74e-11!365;CL:0000219!4.28e-09!390;CL:0000990!1.91e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.28e-69;33!CL:0002057;3.28e-69;33!CL:0000473;7.14e-53;39!CL:0000234;7.14e-53;39!CL:0000576;2.42e-45;48!CL:0000766;8.22e-27;69!CL:0000236;1.27e-21;13!CL:0000945;8.56e-20;24!CL:0002087;9.57e-19;104!CL:0000738;1.06e-14;136!CL:0000763;2.22e-12;100!CL:0000988;3.27e-09;177!CL:0000542;7.29e-08;53!CL:0000453;1.67e-07;5!CL:0000219;2.44e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.90e-83,42;CL:0002057,4.90e-83,42;CL:0000473,2.49e-81,48;CL:0000234,2.49e-81,48;CL:0002194,1.98e-63,59;CL:0000576,1.98e-63,59;CL:0000040,1.98e-63,59;CL:0000559,1.98e-63,59;CL:0002087,3.76e-61,115;CL:0002009,4.04e-61,61;CL:0002031,3.23e-58,120;CL:0000738,3.53e-58,136;CL:0000839,5.98e-56,66;CL:0000557,5.25e-55,67;CL:0000766,1.11e-50,72;CL:0002032,1.20e-47,161;CL:0000837,1.20e-47,161;CL:0000037,2.96e-45,168;CL:0000988,1.87e-42,177;CL:0000763,3.73e-38,108;CL:0000049,3.73e-38,108;CL:0000236,9.22e-25,14;CL:0000945,8.08e-20,24;CL:0000826,8.08e-20,24;CL:0000134,3.57e-16,354;CL:0002320,1.17e-15,361;CL:0000219,7.51e-14,386;CL:0000048,1.23e-11,427;CL:0000723,2.48e-11,433;CL:0000034,6.16e-11,441;CL:0002393,2.91e-10,9;CL:0002397,2.91e-10,9;CL:0000838,2.69e-09,52;CL:0000542,4.53e-09,53;CL:0000051,4.53e-09,53;CL:0000453,1.65e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.48e-60;42!CL:0000049;1.18e-14;108!CL:0000051;7.29e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.49e-42!102;UBERON:0003061!1.49e-42!102;UBERON:0002371!2.79e-42!80;UBERON:0002193!1.73e-40!112;UBERON:0001474!3.20e-38!86;UBERON:0002405!4.39e-33!115;UBERON:0004765!3.31e-30!101;UBERON:0001434!3.31e-30!101;UBERON:0002204!6.97e-14!167;UBERON:0003081!9.85e-14!216;UBERON:0002384!1.95e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.27e-47,76;UBERON:0001474,1.37e-43,82;UBERON:0002405,7.21e-43,93;UBERON:0004765,4.85e-39,90;UBERON:0002390,8.18e-38,98;UBERON:0003061,8.18e-38,98;UBERON:0002193,8.49e-36,108;UBERON:0001434,2.28e-34,100;UBERON:0002204,1.88e-17,167;UBERON:0002384,5.85e-15,371;UBERON:0003081,4.01e-14,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,0.903106483949403,1.02324015707783,0.786728553697808,0.767658796194425,0.464448369948228,0,0,0,3.02122082263176,0.710846162437108,0,0,0.200544447470142,0.217010870715852,0.671746422719773,0,0.515151135268373,3.19876125315042,2.64513160582167,2.66842467306598,0.697287110717054,1.6446715520873,1.85823822537062,2.58923153089935,1.7931249457037,2.83778675866302,3.10271112662957,0.645484683583826,0,3.01187743268168,2.72906150057846,2.69668181334102,10.7129362329816,2.24650318953266,8.31138263538754,2.96866170168044,2.99195486432448,4.68847225585964,8.9964863974861,2.26954089876456,3.73693349397345,0.502497330513487,3.12889751052121,2.38907729175628,14.5295880632009,3.31449872388808,9.81033401066742,1.26753171787165,1.27562579979026,1.67726916406701,0.561643155732475,0.300353785683013,0.48217676009124,2.56511469367124,0.99458338599545,5.11459630540975,3.51992488922645,1.63841583378639,0,1.70692089026603,1.20118796110804,4.02326707968138,1.32208974556972,1.90810750907073,1.70763890732835,0.587237189370939,1.52909291250092,0,0,0,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0.696518949197069,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0.936017060556951,0.891786973732369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0.28853842595289,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.494411622680279,0,0,1.10513566212459,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0.364909578431332,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,2.36598618851383,0,0,0.717873024576814,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,1.24271716604159,0.992332043623902,0.395223263795889,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33832370607266,1.72724292407372,3.10774249086104,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,1.84374380089247,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0,0,0,0.939839179798536,0.837952543656503,7.79541016214446,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0.31037357147929,0,0.0636471582781649,0,0,0,1.6164492723501,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0.961705476909699 | |||
|short_description=p17@GSN | |||
}} |
Latest revision as of 20:37, 24 September 2015
Short description: | p17@GSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_GSN_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000373823, ENST00000434663_5end |
EntrezGene: | GSN |
HGNC: | 4620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.27e-47 | 76 |
bone element | 1.37e-43 | 82 |
immune system | 7.21e-43 | 93 |
skeletal element | 4.85e-39 | 90 |
hematopoietic system | 8.18e-38 | 98 |
blood island | 8.18e-38 | 98 |
hemolymphoid system | 8.49e-36 | 108 |
skeletal system | 2.28e-34 | 100 |
musculoskeletal system | 1.88e-17 | 167 |
connective tissue | 5.85e-15 | 371 |
lateral plate mesoderm | 4.01e-14 | 203 |