FFCP PHASE1:Hg19::chr19:751122..751139,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=126353 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=27000 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8IVT2 | ||
|association_with_transcript=-6bp_to_ENST00000215582,NM_173481,uc002lpo.2_5end | |association_with_transcript=-6bp_to_ENST00000215582,NM_173481,uc002lpo.2_5end | ||
|cluster_id=chr19:751122..751139,+ | |cluster_id=chr19:751122..751139,+ | ||
Latest revision as of 20:19, 24 September 2015
| Short description: | p1@C19orf21 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_C19orf21_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -6bp_to_ENST00000215582, NM_173481, uc002lpo.2_5end |
| EntrezGene: | C19orf21 |
| HGNC: | 27000 |
| UniProt: | Q8IVT2 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@C19orf21 |
|---|
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150
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 2.28e-59 | 253 |
| endo-epithelial cell | 2.49e-26 | 42 |
| endodermal cell | 1.27e-23 | 58 |
| respiratory epithelial cell | 5.86e-15 | 13 |
| epithelial cell of lung | 3.57e-12 | 19 |
| epithelial cell of tracheobronchial tree | 4.09e-11 | 9 |
| epithelial cell of lower respiratory tract | 4.09e-11 | 9 |
| general ecto-epithelial cell | 4.98e-10 | 14 |
| epithelial cell of alimentary canal | 1.55e-09 | 20 |
| kidney tubule cell | 2.35e-09 | 10 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| endoderm-derived structure | 1.77e-31 | 160 |
| endoderm | 1.77e-31 | 160 |
| presumptive endoderm | 1.77e-31 | 160 |
| respiratory primordium | 2.52e-25 | 38 |
| endoderm of foregut | 2.52e-25 | 38 |
| digestive system | 4.93e-24 | 145 |
| digestive tract | 4.93e-24 | 145 |
| primitive gut | 4.93e-24 | 145 |
| respiratory tract | 4.06e-22 | 54 |
| subdivision of digestive tract | 4.40e-22 | 118 |
Showing 1 to 10 of 50 entries
| Ontology term | p-value | n |
|---|---|---|
| carcinoma | 2.88e-45 | 106 |
| cell type cancer | 2.83e-30 | 143 |
| cancer | 7.55e-16 | 235 |
| disease of cellular proliferation | 5.65e-15 | 239 |
| adenocarcinoma | 3.30e-14 | 25 |
| squamous cell carcinoma | 9.74e-10 | 14 |
| respiratory system cancer | 1.05e-08 | 16 |
| lung cancer | 6.67e-08 | 15 |
Showing 1 to 8 of 8 entries
