FFCP PHASE1:Hg19::chr3:13114908..13114956,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:13114908..13114956,-
|short_description=p2@IQSEC1
|description=CAGE_peak_2_at_IQSEC1_5end
|association_with_transcript=-291bp_to_ENST00000429247,ENST000004...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9922 | |EntrezGene=9922 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29112 | |HGNC=29112 | ||
|TSSclassifier=strong | |||
|UniProt=C9JMG9,E9PG60,B4DGC5,Q6DN90 | |UniProt=C9JMG9,E9PG60,B4DGC5,Q6DN90 | ||
|association_with_transcript=-291bp_to_ENST00000429247,ENST00000435445,NM_001134382,uc011auw.1_5end | |||
|cluster_id=chr3:13114908..13114956,- | |||
|description=CAGE_peak_2_at_IQSEC1_5end | |||
|id=chr3:13114908..13114956,- | |||
|ontology_enrichment_celltype=CL:0000542!5.57e-21!53;CL:0000051!5.57e-21!53;CL:0000838!2.76e-20!52;CL:0000945!2.21e-15!24;CL:0000826!2.21e-15!24;CL:0000236!2.31e-13!14;CL:0002087!8.41e-13!119;CL:0000738!2.23e-10!140;CL:0002031!5.22e-09!124;CL:0000625!5.92e-07!11;CL:0000791!9.39e-07!18;CL:0000789!9.39e-07!18;CL:0002420!9.39e-07!18;CL:0002419!9.39e-07!18;CL:0000790!9.39e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.86e-19;24!CL:0000236;2.53e-16;13!CL:0000542;3.32e-15;53!CL:0000625;6.96e-09;11!CL:0000791;7.81e-07;18!CL:0000789;7.81e-07;18!CL:0002419;7.81e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.19e-26,53;CL:0000051,4.19e-26,53;CL:0000838,3.53e-25,52;CL:0000945,2.12e-19,24;CL:0000826,2.12e-19,24;CL:0000236,1.60e-17,14;CL:0002087,8.71e-11,115;CL:0000738,1.58e-09,136;CL:0000625,4.66e-09,11;CL:0002031,2.14e-07,120;CL:0000791,5.32e-07,18;CL:0000789,5.32e-07,18;CL:0002420,5.32e-07,18;CL:0002419,5.32e-07,18;CL:0000790,5.32e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;3.32e-15;53!UBERON:0006601;8.12e-12;82!CL:0000790;7.81e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.19e-53!115;UBERON:0001049!6.18e-42!57;UBERON:0005068!6.18e-42!57;UBERON:0006241!6.18e-42!57;UBERON:0007135!6.18e-42!57;UBERON:0001017!6.78e-36!82;UBERON:0002780!1.76e-35!41;UBERON:0001890!1.76e-35!41;UBERON:0006240!1.76e-35!41;UBERON:0005743!2.33e-35!86;UBERON:0000073!4.77e-35!94;UBERON:0001016!4.77e-35!94;UBERON:0002616!3.13e-34!59;UBERON:0003080!3.28e-34!42;UBERON:0001893!2.77e-30!34;UBERON:0002020!2.93e-30!34;UBERON:0003528!2.93e-30!34;UBERON:0000955!4.64e-30!69;UBERON:0006238!4.64e-30!69;UBERON:0002791!2.68e-29!33;UBERON:0001869!2.08e-28!32;UBERON:0003075!7.30e-27!86;UBERON:0007284!7.30e-27!86;UBERON:0002346!2.09e-25!90;UBERON:0000956!1.38e-22!25;UBERON:0000203!1.38e-22!25;UBERON:0002619!1.11e-21!22;UBERON:0003056!4.28e-21!61;UBERON:0001950!5.52e-20!20;UBERON:0000153!9.06e-14!129;UBERON:0007811!9.06e-14!129;UBERON:0000033!2.79e-12!123;UBERON:0004121!3.23e-12!169;UBERON:0000924!8.52e-12!173;UBERON:0006601!8.52e-12!173;UBERON:0002308!4.56e-09!9;UBERON:0000125!4.56e-09!9;UBERON:0002420!5.21e-09!9;UBERON:0007245!5.21e-09!9;UBERON:0010009!5.21e-09!9;UBERON:0010011!5.21e-09!9;UBERON:0000454!5.21e-09!9;UBERON:0003076!6.11e-09!15;UBERON:0003057!6.11e-09!15;UBERON:0000178!6.20e-09!15;UBERON:0000179!6.20e-09!15;UBERON:0000463!6.20e-09!15;UBERON:0001871!2.17e-08!7;UBERON:0004732!1.33e-07!13;UBERON:0000200!3.32e-07!6;UBERON:0009663!3.39e-07!7;UBERON:0004733!9.99e-07!12;UBERON:0002028!9.99e-07!12;UBERON:0007277!9.99e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.75e-31;41!UBERON:0001890;2.75e-31;41!UBERON:0001893;3.29e-31;34!UBERON:0003528;4.92e-31;34!UBERON:0002020;4.92e-31;34!UBERON:0001869;1.29e-30;32!UBERON:0002791;1.68e-30;32!UBERON:0000073;7.26e-30;53!UBERON:0002616;7.26e-30;53!UBERON:0002619;8.18e-29;22!UBERON:0001950;1.63e-26;20!UBERON:0000956;2.15e-26;25!UBERON:0000203;2.15e-26;25!UBERON:0001017;6.97e-19;75!UBERON:0000955;8.88e-19;68!UBERON:0001016;1.52e-17;83!UBERON:0007023;7.37e-12;114!UBERON:0000178;8.07e-12;15!UBERON:0000179;8.07e-12;15!UBERON:0000463;8.07e-12;15!UBERON:0000125;1.01e-11;9!UBERON:0002308;1.01e-11;9!UBERON:0002420;1.24e-11;9!UBERON:0007245;1.24e-11;9!UBERON:0010009;1.24e-11;9!UBERON:0010011;1.24e-11;9!UBERON:0000454;1.24e-11;9!UBERON:0004732;2.48e-10;13!UBERON:0001871;1.63e-09;6!UBERON:0000200;3.01e-09;6!UBERON:0009663;3.39e-09;7!UBERON:0004733;3.90e-09;12!UBERON:0002028;3.90e-09;12!UBERON:0002298;5.76e-09;6!UBERON:0001894;2.28e-08;7!UBERON:0001872;9.05e-08;5!UBERON:0000349;1.40e-07;5!UBERON:0002021;2.18e-07;5!UBERON:0011216;4.15e-07;132!UBERON:0002390;5.12e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.33e-55,56;UBERON:0005068,6.33e-55,56;UBERON:0006241,6.33e-55,56;UBERON:0007135,6.33e-55,56;UBERON:0000073,1.52e-51,53;UBERON:0002616,1.52e-51,53;UBERON:0001016,1.19e-44,89;UBERON:0001017,3.11e-44,81;UBERON:0002780,1.00e-43,41;UBERON:0001890,1.00e-43,41;UBERON:0003080,1.00e-43,41;UBERON:0006240,1.00e-43,41;UBERON:0007023,1.64e-41,114;UBERON:0000955,2.60e-41,68;UBERON:0006238,2.60e-41,68;UBERON:0001893,1.13e-36,34;UBERON:0003528,1.22e-36,34;UBERON:0002020,1.22e-36,34;UBERON:0003075,9.11e-35,82;UBERON:0007284,9.11e-35,82;UBERON:0001869,3.73e-34,32;UBERON:0002791,4.70e-34,32;UBERON:0002346,2.87e-32,86;UBERON:0002619,8.52e-29,22;UBERON:0003056,5.07e-28,61;UBERON:0001950,1.70e-26,20;UBERON:0000956,2.60e-26,25;UBERON:0000203,2.60e-26,25;UBERON:0010371,1.72e-23,104;UBERON:0010314,1.78e-16,132;UBERON:0004121,4.74e-15,171;UBERON:0000924,4.74e-15,171;UBERON:0006601,4.74e-15,171;UBERON:0011216,1.35e-14,223;UBERON:0003076,3.92e-12,15;UBERON:0003057,3.92e-12,15;UBERON:0000178,9.96e-12,15;UBERON:0000179,9.96e-12,15;UBERON:0000463,9.96e-12,15;UBERON:0000125,1.03e-11,9;UBERON:0002308,1.03e-11,9;UBERON:0002420,1.24e-11,9;UBERON:0007245,1.24e-11,9;UBERON:0010009,1.24e-11,9;UBERON:0010011,1.24e-11,9;UBERON:0000454,1.24e-11,9;UBERON:0004732,2.58e-10,13;UBERON:0001871,1.64e-09,6;UBERON:0000200,3.35e-09,6;UBERON:0009663,3.44e-09,7;UBERON:0004733,4.09e-09,12;UBERON:0002028,4.09e-09,12;UBERON:0007277,4.09e-09,12;UBERON:0002298,6.35e-09,6;UBERON:0001894,2.46e-08,7;UBERON:0006222,2.46e-08,7;UBERON:0001872,8.90e-08,5;UBERON:0000349,1.35e-07,5;UBERON:0002021,2.19e-07,5;UBERON:0000025,8.94e-07,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14494394852423,0.958120975510189,0.753255837568817,4.43197753338117,1.9704141467987,2.36132343941038,2.75354993794233,10.747223146722,4.33485145285013,0,0,0,6.11990884584383,4.97592313705975,0.293600439334847,2.76997704265939,5.01361118675354,3.90619567288533,0,0.971680998056939,0.515151135268373,0.290796477559129,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0.689491361473237,0,0,0.376484679085209,0.545812300115692,0,0,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0,0,0,1.21079900526674,1.10483290796269,0.316462387440884,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,12.3197371122926,15.8380197266018,14.2321480618169,8.96133467389665,15.2150475073685,14.9435634388166,7.93253847341835,9.54053754535364,29.5990743936913,28.1873850898051,32.8754976187697,0,2.80254281490768,0.526768169550154,0.983548850569165,1.96505381374582,0.616804496998528,0.334372990781356,0,0.473447805734733,3.89653456815823,0.891283655081389,0,1.10766947291811,1.35401931882508,1.66518715643378,1.69077151827842,4.27538551969558,1.93445012450094,1.73881851441031,0.14828656316206,1.33770414044857,0,2.03956816855619,0,1.37450978193052,0.253019692019503,1.91139248594458,4.55758417699493,0,2.55977702432214,3.83959833463255,4.99722906209383,1.4206635122641,4.92676798152628,5.84659555351724,12.8371293976084,9.55841065626473,0,0,0,0,0,0,0.795285947051099,1.45990461090791,0,0,0.087834785693126,4.71524671791765,0,0,0,0,0,1.19245312152671,5.71994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.662648841607426,1.39432731443422,2.07322110030741,1.26160425437814,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3468984311715,15.5654300559523,18.1127162881995,17.4546529340458,1.01637849688985,2.60279707715243,0.773288812777695,1.34013012267479,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,4.9624326269493,2.5885704098234,9.17856997109621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,1.19040304263846,0.495056999523528,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,3.04468565539302,3.0585488285695,3.98753031021914,4.04994018278241,6.17043409629291,4.53931317834902,2.16012574895246,3.96562588147135,0,0,0,6.31730795427444,1.58696134274089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,19.882952955326,14.6296193066933,0,0,0.63337622438398,0.398495976502139,6.90709788827869,0,0,3.32328974744888,0,0,0,0,2.76201535783414,0,0,15.5093239375235,26.1606036816421,5.98841394003583,0,0,0,0,0,0,4.82640722538051,1.16641845353302,2.43074992906609,5.31444831488303,6.15041836989581,22.8872604475625,56.8377396046495,28.9636666574477,17.9896025666257,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.14994833854341,1.22206028986725,1.18608451472249,2.10058696209055,2.92381458615275,20.9617523569906,0,7.73072670893619,6.93328199019531,0,0,0.789168805698781,1.20990716048664,9.79432837217568,1.20054501294127,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.678923115418936,0,3.84167259326905,0,0,20.8292518694841,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,9.60672461935663,14.6488755414433,1.27746588066972,0,5.25774708558629,0.279282401272254,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,11.9284453471395,13.2117303928228,0.321506296930038,0.275078873194468,0,0,0,21.8090908402309,0,0.0788057072991982,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,21.3316877996558,16.6613078195789,0,0,1.70859860108311,0.314408610199332,0.828478110694391,4.46549419630756,0.197611631897944,0.121792598380896,0,0,0,0,0,0,14.1770908794718,14.2770729935297,21.1572672893985,5.16068276121064,14.4207766997908,21.1127770000704,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.7065744758217,0,0,0,0,0,0,2.99981093782395,0,0,0,0,0,0,5.49945796605702,6.36166387240423,0,11.0301734573934,0,0,0,0,0,1.10406443001755,3.20228299314188,0,0,17.5345784513335,7.08482881627925,22.0294725498869,12.5120982186861,5.5455773168778,26.5563849462597,20.9918339321406,21.4154130388732,0,0,0,0,0,0,0,0.150420656698515,0.40341013740704,0,0,0,0,21.2743391547943,12.4972495778216,26.2492231556504,22.5126126188369,6.56369770821863,0,0.992422356778588,0.175871244359621,0,6.42842203053944,1.3451348888753,4.24875922965642,10.2447986108084,0,11.8691007182453,0,42.2771739115893,22.231197464243,0,0,0.15698618570102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| ||
|short_description=p2@IQSEC1 | |||
}} | }} |
Latest revision as of 19:49, 24 September 2015
Short description: | p2@IQSEC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IQSEC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -291bp_to_ENST00000429247, ENST00000435445, NM_001134382, uc011auw.1_5end |
EntrezGene: | IQSEC1 |
HGNC: | 29112 |
UniProt: | C9JMG9E9PG60B4DGC5Q6DN90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.19e-26 | 53 |
common lymphoid progenitor | 4.19e-26 | 53 |
lymphoid lineage restricted progenitor cell | 3.53e-25 | 52 |
lymphocyte of B lineage | 2.12e-19 | 24 |
pro-B cell | 2.12e-19 | 24 |
B cell | 1.60e-17 | 14 |
nongranular leukocyte | 8.71e-11 | 115 |
leukocyte | 1.58e-09 | 136 |
CD8-positive, alpha-beta T cell | 4.66e-09 | 11 |
hematopoietic lineage restricted progenitor cell | 2.14e-07 | 120 |
mature alpha-beta T cell | 5.32e-07 | 18 |
alpha-beta T cell | 5.32e-07 | 18 |
immature T cell | 5.32e-07 | 18 |
mature T cell | 5.32e-07 | 18 |
immature alpha-beta T cell | 5.32e-07 | 18 |