FFCP PHASE1:Hg19::chr4:114900831..114900844,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:114900831..114900844,- to FFCP PHASE1:Hg19::chr4:114900831..114900844,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79642 | |EntrezGene=79642 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26286 | |HGNC=26286 | ||
|TSSclassifier=strong | |||
|UniProt=Q5FYB0 | |UniProt=Q5FYB0 | ||
|association_with_transcript=12bp_to_ENST00000315366_5end | |||
|cluster_id=chr4:114900831..114900844,- | |||
|coexpression_cluster_id=C4362 | |||
|description=CAGE_peak_3_at_ARSJ_5end | |||
|id=chr4:114900831..114900844,- | |||
|ontology_enrichment_celltype=CL:0000055!1.23e-31!180;CL:0000220!1.13e-22!246;CL:0002321!3.01e-22!248;CL:0000222!1.39e-19!119;CL:0000680!4.77e-18!57;CL:0000056!4.77e-18!57;CL:0000355!4.77e-18!57;CL:0000187!1.31e-16!54;CL:0000192!4.06e-16!42;CL:0000514!4.06e-16!42;CL:0000183!5.63e-16!59;CL:0000057!1.67e-15!75;CL:0000359!2.43e-15!32;CL:0000393!1.03e-14!60;CL:0000211!1.03e-14!60;CL:0002371!1.04e-08!591;CL:0002139!1.23e-08!24;CL:0000548!3.25e-08!679;CL:0000004!3.25e-08!679;CL:0000255!3.25e-08!679;CL:0000012!1.01e-07!682;CL:0000144!4.90e-07!625;CL:0000071!6.95e-07!18;CL:0002546!6.95e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.80e-18;32!CL:0000192;7.41e-14;43!CL:0000187;2.71e-09;55!CL:0002139;6.49e-09;24!CL:0000393;6.11e-08;61!CL:0000211;6.11e-08;61!CL:0000071;1.35e-07;18!CL:0000057;3.68e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.83e-20,121;CL:0000680,1.46e-19,58;CL:0000056,1.46e-19,58;CL:0000355,1.46e-19,58;CL:0000359,1.55e-19,32;CL:0000192,1.22e-18,43;CL:0000514,1.22e-18,43;CL:0000187,1.41e-17,55;CL:0002321,4.54e-17,250;CL:0000393,1.59e-14,61;CL:0000211,1.59e-14,61;CL:0000057,3.71e-13,76;CL:0002139,5.93e-09,24;CL:0000071,1.16e-07,18;CL:0002546,1.16e-07,18;CL:0000115,3.73e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;7.41e-14;43!CL:0000355;4.08e-11;58!CL:0002546;1.35e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.93e-24!79;UBERON:0007798!1.93e-24!79;UBERON:0000055!1.17e-21!69;UBERON:0000914!1.59e-20!83;UBERON:0002329!1.59e-20!83;UBERON:0003077!1.59e-20!83;UBERON:0003059!1.59e-20!83;UBERON:0007282!1.59e-20!83;UBERON:0009618!1.59e-20!83;UBERON:0007285!1.59e-20!83;UBERON:0001981!4.22e-20!60;UBERON:0007500!4.22e-20!60;UBERON:0004537!4.22e-20!60;UBERON:0006965!4.22e-20!60;UBERON:0001637!1.36e-19!42;UBERON:0003509!1.36e-19!42;UBERON:0004572!1.36e-19!42;UBERON:0004872!7.59e-19!84;UBERON:0005256!3.30e-17!143;UBERON:0000490!3.83e-17!138;UBERON:0004535!5.30e-17!110;UBERON:0004290!6.47e-17!70;UBERON:0000486!7.34e-17!82;UBERON:0003914!1.96e-16!118;UBERON:0001009!2.43e-16!113;UBERON:0000475!3.08e-15!365;UBERON:0001134!3.27e-15!61;UBERON:0002036!3.27e-15!61;UBERON:0003082!3.27e-15!61;UBERON:0000477!4.55e-15!286;UBERON:0000483!6.01e-15!309;UBERON:0002385!7.97e-15!63;UBERON:0001015!7.97e-15!63;UBERON:0000383!7.97e-15!63;UBERON:0000119!7.99e-15!312;UBERON:0000481!8.99e-15!347;UBERON:0004573!2.37e-14!33;UBERON:0004571!2.37e-14!33;UBERON:0003104!5.53e-14!238;UBERON:0009142!5.53e-14!238;UBERON:0002100!1.70e-13!216;UBERON:0004111!2.54e-13!241;UBERON:0000468!1.85e-12!659;UBERON:0003102!3.12e-12!95;UBERON:0000467!2.73e-11!625;UBERON:0000480!4.21e-11!626;UBERON:0000947!1.30e-08!21;UBERON:0010191!1.30e-08!21;UBERON:0002050!1.06e-07!605;UBERON:0005423!1.06e-07!605;UBERON:0000923!1.69e-07!604;UBERON:0005291!1.69e-07!604;UBERON:0006598!1.69e-07!604;UBERON:0002532!1.69e-07!604;UBERON:0000025!2.74e-07!194;UBERON:0000922!3.95e-07!612;UBERON:0000487!4.38e-07!22;UBERON:0001986!6.95e-07!18;UBERON:0004638!6.95e-07!18;UBERON:0004852!6.95e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.84e-17;42!UBERON:0003509;4.84e-17;42!UBERON:0004572;4.84e-17;42!UBERON:0004573;6.28e-15;33!UBERON:0004571;6.28e-15;33!UBERON:0007500;7.54e-14;56!UBERON:0001981;7.54e-14;56!UBERON:0004537;7.54e-14;56!UBERON:0000055;1.92e-13;65!UBERON:0002049;4.69e-13;75!UBERON:0007798;4.69e-13;75!UBERON:0000947;3.62e-09;21!UBERON:0010191;3.62e-09;21!UBERON:0003914;1.01e-08;74!UBERON:0010260;3.42e-08;9!UBERON:0004638;1.35e-07;18!UBERON:0001986;1.35e-07;18!UBERON:0004852;1.35e-07;18!UBERON:0000487;1.59e-07;22!UBERON:0006914;6.71e-07;25!UBERON:0000075;8.91e-07;16 | |||
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| ||
|short_description=p3@ARSJ | |||
}} | }} |
Latest revision as of 19:49, 24 September 2015
Short description: | p3@ARSJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARSJ_5end |
Coexpression cluster: | C4362_Multipotent_bone_basal_amniotic_Myoblast_Nucleus_Smooth |
Association with transcript: | 12bp_to_ENST00000315366_5end |
EntrezGene: | ARSJ |
HGNC: | 26286 |
UniProt: | Q5FYB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.83e-20 | 121 |
muscle precursor cell | 1.46e-19 | 58 |
myoblast | 1.46e-19 | 58 |
multi-potent skeletal muscle stem cell | 1.46e-19 | 58 |
vascular associated smooth muscle cell | 1.55e-19 | 32 |
smooth muscle cell | 1.22e-18 | 43 |
smooth muscle myoblast | 1.22e-18 | 43 |
muscle cell | 1.41e-17 | 55 |
embryonic cell | 4.54e-17 | 250 |
electrically responsive cell | 1.59e-14 | 61 |
electrically active cell | 1.59e-14 | 61 |
fibroblast | 3.71e-13 | 76 |
endothelial cell of vascular tree | 5.93e-09 | 24 |
blood vessel endothelial cell | 1.16e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.16e-07 | 18 |
endothelial cell | 3.73e-07 | 36 |