FFCP PHASE1:Hg19::chr2:220080970..220081009,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10058 | |EntrezGene=10058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=47 | |HGNC=47 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000492953_5end | |association_with_transcript=0bp_to_ENST00000492953_5end | ||
|cluster_id=chr2:220080970..220081009,- | |||
|coexpression_cluster_id=C524 | |coexpression_cluster_id=C524 | ||
|description=CAGE_peak_16_at_ABCB6_5end | |description=CAGE_peak_16_at_ABCB6_5end | ||
|id=chr2:220080970..220081009,- | |id=chr2:220080970..220081009,- | ||
|ontology_enrichment_celltype=CL:0002322!1.57e-13!5;CL:0002149!1.05e-11!6;CL:0002255!1.05e-11!6;CL:0000239!9.56e-11!3;CL:1000615!9.56e-11!3;CL:0002306!9.56e-11!3;CL:1000507!6.87e-10!12;CL:1000494!6.87e-10!12;CL:0002681!3.87e-09!13;CL:0002584!3.87e-09!13;CL:0000313!6.03e-09!1;CL:1000449!1.92e-07!16 | |ontology_enrichment_celltype=CL:0002322!1.57e-13!5;CL:0002149!1.05e-11!6;CL:0002255!1.05e-11!6;CL:0000239!9.56e-11!3;CL:1000615!9.56e-11!3;CL:0002306!9.56e-11!3;CL:1000507!6.87e-10!12;CL:1000494!6.87e-10!12;CL:0002681!3.87e-09!13;CL:0002584!3.87e-09!13;CL:0000313!6.03e-09!1;CL:1000449!1.92e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000313;2.42e-50;1!CL:0002149;7.68e-34;6!CL:0002255;7.68e-34;6!CL:0000159;5.56e-26;2!CL:0000499;3.85e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.42e-50,1;CL:0002149,8.35e-34,6;CL:0002255,8.35e-34,6;CL:0000159,5.56e-26,2;CL:0000499,3.92e-08,28 | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.10e-26;2!UBERON:0006603;1.98e-09;65 | |||
|ontology_enrichment_disease=DOID:3493!2.99e-15!2;DOID:3001!1.05e-11!6;DOID:299!4.47e-10!25;DOID:2152!6.03e-09!1 | |ontology_enrichment_disease=DOID:3493!2.99e-15!2;DOID:3001!1.05e-11!6;DOID:299!4.47e-10!25;DOID:2152!6.03e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:2152;2.42e-50;1!DOID:3001;7.68e-34;6!DOID:299;1.05e-18;25!DOID:120;2.15e-17;27!DOID:193;2.90e-16;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.42e-50,1;DOID:3001,8.35e-34,6;DOID:299,1.09e-18,25;DOID:120,2.21e-17,27;DOID:193,2.98e-16,29 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004911;2.42e-50;1!UBERON:0001301;5.12e-50;1!UBERON:0004909;5.56e-26;2!UBERON:0004175;5.11e-22;21!UBERON:0006947;1.03e-17;3!UBERON:0004054;1.03e-17;3!UBERON:0003133;4.26e-15;44!UBERON:0005904;1.21e-13;4!UBERON:0000474;7.62e-13;37!UBERON:0000995;1.00e-12;17!UBERON:0003134;1.62e-12;33!UBERON:0003975;4.43e-12;18!UBERON:0003100;4.37e-10;41!UBERON:0005156;8.74e-09;59!UBERON:0000990;8.74e-09;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,2.42e-50,1;UBERON:0001301,3.99e-50,1;UBERON:0004909,5.56e-26,2;UBERON:0004175,1.15e-18,25;UBERON:0006947,9.46e-18,3;UBERON:0004054,9.46e-18,3;UBERON:0003133,2.57e-17,48;UBERON:0005156,2.92e-14,59;UBERON:0000990,2.92e-14,59;UBERON:0005904,1.13e-13,4;UBERON:0003134,5.98e-13,37;UBERON:0000474,5.98e-13,37;UBERON:0003100,8.89e-12,41;UBERON:0000995,1.69e-10,21;UBERON:0005795,4.53e-10,22;UBERON:0003975,4.53e-10,22;UBERON:0005103,1.69e-07,8;UBERON:0000083,1.69e-07,8;UBERON:0009201,1.69e-07,8;UBERON:0006553,1.69e-07,8;UBERON:0003074,1.69e-07,8;UBERON:0003060,1.69e-07,8;UBERON:0000080,8.37e-07,9;UBERON:0002120,8.37e-07,9;UBERON:0004875,8.37e-07,9;UBERON:0005721,8.37e-07,9;UBERON:0005754,8.37e-07,9;UBERON:0007297,8.37e-07,9 | |||
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|short_description=p16@ABCB6 | |short_description=p16@ABCB6 | ||
}} | }} |
Latest revision as of 19:42, 24 September 2015
Short description: | p16@ABCB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ABCB6_5end |
Coexpression cluster: | C524_serous_endometrioid_endometrial_mesothelioma_gall_clear_papillotubular |
Association with transcript: | 0bp_to_ENST00000492953_5end |
EntrezGene: | ABCB6 |
HGNC: | 47 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.42e-50 | 1 |
epithelial cell of uterus | 8.35e-34 | 6 |
stromal cell of endometrium | 8.35e-34 | 6 |
seromucus secreting cell | 5.56e-26 | 2 |
stromal cell | 3.92e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 2.42e-50 | 1 |
epididymis | 3.99e-50 | 1 |
epithelium of gonad | 5.56e-26 | 2 |
internal genitalia | 1.15e-18 | 25 |
male genital duct | 9.46e-18 | 3 |
internal male genitalia | 9.46e-18 | 3 |
reproductive organ | 2.57e-17 | 48 |
reproductive structure | 2.92e-14 | 59 |
reproductive system | 2.92e-14 | 59 |
duct of male reproductive system | 1.13e-13 | 4 |
female reproductive organ | 5.98e-13 | 37 |
female reproductive system | 5.98e-13 | 37 |
female organism | 8.89e-12 | 41 |
uterus | 1.69e-10 | 21 |
embryonic uterus | 4.53e-10 | 22 |
internal female genitalia | 4.53e-10 | 22 |
mesonephric epithelium | 1.69e-07 | 8 |
mesonephric tubule | 1.69e-07 | 8 |
nephric duct | 1.69e-07 | 8 |
renal duct | 1.69e-07 | 8 |
mesonephric duct | 1.69e-07 | 8 |
pronephric duct | 1.69e-07 | 8 |
mesonephros | 8.37e-07 | 9 |
pronephros | 8.37e-07 | 9 |
nephrogenic cord | 8.37e-07 | 9 |
pronephric mesoderm | 8.37e-07 | 9 |
rostral part of nephrogenic cord | 8.37e-07 | 9 |
presumptive pronephric mesoderm | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.42e-50 | 1 |
female reproductive endometrioid cancer | 8.35e-34 | 6 |
adenocarcinoma | 1.09e-18 | 25 |
female reproductive organ cancer | 2.21e-17 | 27 |
reproductive organ cancer | 2.98e-16 | 29 |