FFCP PHASE1:Hg19::chr14:60043498..60043512,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:60043498..60043512,-
|short_description=p1@C14orf38
|description=CAGE_peak_1_at_C14orf38_5end
|association_with_transcript=36bp_to_ENST00000281581,ENST000...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=729665 | |EntrezGene=729665 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19847 | |HGNC=19847 | ||
|TSSclassifier=strong | |||
|UniProt=P0C221,G3V5J7 | |UniProt=P0C221,G3V5J7 | ||
|association_with_transcript=36bp_to_ENST00000281581,ENST00000537690,NM_001164399_5end | |||
|cluster_id=chr14:60043498..60043512,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_1_at_C14orf38_5end | |||
|id=chr14:60043498..60043512,- | |||
|ontology_enrichment_celltype=CL:0002319!4.58e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002032;5.30e-10;1!CL:0000037;5.30e-10;1!CL:0001024;5.30e-10;1!CL:0000557;5.30e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,5.31e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.01e-27;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!8.94e-45!86;UBERON:0001049!2.50e-42!57;UBERON:0005068!2.50e-42!57;UBERON:0006241!2.50e-42!57;UBERON:0007135!2.50e-42!57;UBERON:0001017!6.69e-42!82;UBERON:0000073!1.26e-40!94;UBERON:0001016!1.26e-40!94;UBERON:0002616!3.21e-36!59;UBERON:0000955!1.24e-35!69;UBERON:0006238!1.24e-35!69;UBERON:0003075!7.41e-31!86;UBERON:0007284!7.41e-31!86;UBERON:0002780!6.17e-30!41;UBERON:0001890!6.17e-30!41;UBERON:0006240!6.17e-30!41;UBERON:0003080!5.26e-29!42;UBERON:0002346!7.74e-29!90;UBERON:0002020!2.21e-27!34;UBERON:0003528!2.21e-27!34;UBERON:0001893!3.08e-27!34;UBERON:0002791!6.36e-26!33;UBERON:0001869!1.46e-24!32;UBERON:0003056!1.87e-21!61;UBERON:0007023!2.47e-21!115;UBERON:0000956!6.24e-20!25;UBERON:0000203!6.24e-20!25;UBERON:0000033!3.56e-18!123;UBERON:0002619!3.90e-18!22;UBERON:0001950!5.22e-18!20;UBERON:0000153!1.05e-17!129;UBERON:0007811!1.05e-17!129;UBERON:0004121!4.63e-17!169;UBERON:0000924!2.67e-16!173;UBERON:0006601!2.67e-16!173;UBERON:0003076!2.57e-14!15;UBERON:0003057!2.57e-14!15;UBERON:0004733!5.02e-13!12;UBERON:0002028!5.02e-13!12;UBERON:0007277!5.02e-13!12;UBERON:0004732!7.94e-12!13;UBERON:0002680!1.40e-11!9;UBERON:0001895!1.40e-11!9;UBERON:0010092!1.40e-11!9;UBERON:0000025!8.61e-10!194;UBERON:0002308!6.82e-09!9;UBERON:0000125!6.82e-09!9;UBERON:0002037!1.53e-07!6;UBERON:0006215!1.53e-07!6;UBERON:0001871!2.67e-07!7;UBERON:0002298!2.83e-07!8;UBERON:0000200!4.39e-07!6;UBERON:0004111!8.89e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;7.73e-18;2!UBERON:0002680;1.55e-15;9!UBERON:0001895;1.55e-15;9!UBERON:0002037;1.03e-13;6!UBERON:0000073;1.04e-13;53!UBERON:0002616;1.04e-13;53!UBERON:0004733;1.07e-11;12!UBERON:0002028;1.07e-11;12!UBERON:0004732;8.23e-11;13!UBERON:0001016;1.38e-10;83!UBERON:0003528;7.48e-10;34!UBERON:0002020;7.48e-10;34!UBERON:0000955;9.46e-10;68!UBERON:0001950;9.78e-10;20!UBERON:0002780;1.24e-09;41!UBERON:0001890;1.24e-09;41!UBERON:0003296;2.22e-09;4!UBERON:0010133;2.22e-09;4!UBERON:0001017;6.57e-09;75!UBERON:0002619;7.11e-09;22!UBERON:0000956;7.88e-08;25!UBERON:0000203;7.88e-08;25!UBERON:0002791;9.96e-08;32!UBERON:0001872;1.23e-07;5!UBERON:0001869;1.28e-07;32!UBERON:0002021;1.66e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.62e-20,53;UBERON:0002616,3.62e-20,53;UBERON:0001049,5.31e-19,56;UBERON:0005068,5.31e-19,56;UBERON:0006241,5.31e-19,56;UBERON:0007135,5.31e-19,56;UBERON:0000007,5.28e-18,2;UBERON:0000955,7.07e-18,68;UBERON:0006238,7.07e-18,68;UBERON:0001017,3.25e-17,81;UBERON:0002680,1.77e-15,9;UBERON:0001895,1.77e-15,9;UBERON:0010092,1.77e-15,9;UBERON:0001016,2.72e-15,89;UBERON:0002037,1.04e-13,6;UBERON:0006215,1.04e-13,6;UBERON:0003075,2.04e-12,82;UBERON:0007284,2.04e-12,82;UBERON:0002346,9.42e-12,86;UBERON:0004733,1.18e-11,12;UBERON:0002028,1.18e-11,12;UBERON:0007277,1.18e-11,12;UBERON:0002780,1.61e-11,41;UBERON:0001890,1.61e-11,41;UBERON:0003080,1.61e-11,41;UBERON:0006240,1.61e-11,41;UBERON:0004732,9.01e-11,13;UBERON:0003528,1.14e-10,34;UBERON:0002020,1.14e-10,34;UBERON:0001950,1.31e-09,20;UBERON:0003296,1.84e-09,4;UBERON:0010133,1.84e-09,4;UBERON:0010371,2.17e-09,104;UBERON:0003076,2.35e-09,15;UBERON:0003057,2.35e-09,15;UBERON:0002619,9.27e-09,22;UBERON:0002791,1.84e-08,32;UBERON:0001869,1.84e-08,32;UBERON:0001893,5.94e-08,34;UBERON:0000956,9.94e-08,25;UBERON:0000203,9.94e-08,25;UBERON:0001872,1.27e-07,5;UBERON:0011216,1.31e-07,223;UBERON:0003056,1.79e-07,61;UBERON:0002021,2.16e-07,5;UBERON:0007023,4.97e-07,114;UBERON:0010314,5.48e-07,132;UBERON:0004121,6.27e-07,171;UBERON:0000924,6.27e-07,171;UBERON:0006601,6.27e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.85870796139317,0,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,3.81680571135301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.68152568894461,2.37045676297569,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.76228387266739,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0.5745161103971,0,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0.121360521749513,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.556608588971108,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0.173624994933292,0,1.20596438625408,7.62908681585416,9.39923709415409,4.13766666534966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.265372693510018,1.83309043480088,0,0,0,0.606610196826093,0,0.234264445725339,0,0.19566461893209,0,0,0,0.61214552326098,0.31593289814244,0.150323419414493,0.518440956986236,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,1.01297273529406,0.195551382734803,0.0801588202515337,0,0.19980960958213,0,0,0.857974989309823,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0.410716136675979,3.83239764200917,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.643012593860077,0.137539436597234,0,0.2249738915515,0,0.485996453264197,0,0.157611414598396,0.367182116944987,0,1.07572403599707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,1.19009341568421,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.500763722825999,0,0.887432412294818,0.372578417648301,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,1.27707087245721,0.615349092722265,1.00828678488687,0.414943514785307,0.322951291263702,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0.472763092328763,0,1.2401207790071,0.507326481551255,2.7348740450911,0,0,0,0,0,0,1.82089681270989,3.41493287026946,0,0,0.171488009437418,0.135939465953663,0.263091094251396,0.590969204419841,0,0.078493092850514,0.314231179832004,0.840816489941367,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0.236664001461131,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.118920090777569,0,0,1.81155412280008,0.0771741581079447,0.437119121007915,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.135982980381829,0.872701380680755,0,0,0,0,0.252332849670158,0.109265571963696,0,0,0,0,0,0.985123076837112,1.07185652062471,0,0.724030971033267,0,0.476128862927481,0,0,0,0.12729431655633,0,0,0,0,0.0717222053926763,0,0.569822880276821,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.85870796139317,0,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,3.81680571135301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.68152568894461,2.37045676297569,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.76228387266739,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0.5745161103971,0,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0.121360521749513,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.556608588971108,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0.173624994933292,0,1.20596438625408,7.62908681585416,9.39923709415409,4.13766666534966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.265372693510018,1.83309043480088,0,0,0,0.606610196826093,0,0.234264445725339,0,0.19566461893209,0,0,0,0.61214552326098,0.31593289814244,0.150323419414493,0.518440956986236,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,1.01297273529406,0.195551382734803,0.0801588202515337,0,0.19980960958213,0,0,0.857974989309823,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0.410716136675979,3.83239764200917,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.643012593860077,0.137539436597234,0,0.2249738915515,0,0.485996453264197,0,0.157611414598396,0.367182116944987,0,1.07572403599707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,1.19009341568421,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.500763722825999,0,0.887432412294818,0.372578417648301,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,1.27707087245721,0.615349092722265,1.00828678488687,0.414943514785307,0.322951291263702,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0.472763092328763,0,1.2401207790071,0.507326481551255,2.7348740450911,0,0,0,0,0,0,1.82089681270989,3.41493287026946,0,0,0.171488009437418,0.135939465953663,0.263091094251396,0.590969204419841,0,0.078493092850514,0.314231179832004,0.840816489941367,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0.236664001461131,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.118920090777569,0,0,1.81155412280008,0.0771741581079447,0.437119121007915,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.135982980381829,0.872701380680755,0,0,0,0,0.252332849670158,0.109265571963696,0,0,0,0,0,0.985123076837112,1.07185652062471,0,0.724030971033267,0,0.476128862927481,0,0,0,0.12729431655633,0,0,0,0,0.0717222053926763,0,0.569822880276821,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p1@C14orf38 | |||
}} | }} |
Latest revision as of 19:33, 24 September 2015
Short description: | p1@C14orf38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C14orf38_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 36bp_to_ENST00000281581, ENST00000537690, NM_001164399_5end |
EntrezGene: | C14orf38 |
HGNC: | 19847 |
UniProt: | P0C221G3V5J7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 5.31e-10 | 1 |