FFCP PHASE1:Hg19::chr12:7341800..7341812,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5830 | |EntrezGene=5830 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9719 | |HGNC=9719 | ||
|TSSclassifier=strong | |||
|UniProt=F5H432 | |UniProt=F5H432 | ||
|association_with_transcript=0bp_to_ENST00000540398_5end | |association_with_transcript=0bp_to_ENST00000540398_5end | ||
|cluster_id=chr12:7341800..7341812,+ | |||
|coexpression_cluster_id=C155 | |coexpression_cluster_id=C155 | ||
|description=CAGE_peak_5_at_PEX5_5end | |description=CAGE_peak_5_at_PEX5_5end | ||
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|ontology_enrichment_celltype=CL:0000860!6.01e-22!45;CL:0002057!9.95e-22!42;CL:0000766!2.13e-20!76;CL:0000557!8.74e-18!71;CL:0000839!7.57e-16!70;CL:0002009!1.82e-15!65;CL:0002194!5.45e-14!63;CL:0000576!5.45e-14!63;CL:0000040!5.45e-14!63;CL:0000559!5.45e-14!63;CL:0000738!2.29e-12!140;CL:0000763!7.15e-11!112;CL:0000049!7.15e-11!112;CL:0002031!1.02e-08!124;CL:0000037!3.11e-07!172;CL:0000566!3.11e-07!172;CL:0000988!6.31e-07!182;CL:0002087!6.38e-07!119 | |ontology_enrichment_celltype=CL:0000860!6.01e-22!45;CL:0002057!9.95e-22!42;CL:0000766!2.13e-20!76;CL:0000557!8.74e-18!71;CL:0000839!7.57e-16!70;CL:0002009!1.82e-15!65;CL:0002194!5.45e-14!63;CL:0000576!5.45e-14!63;CL:0000040!5.45e-14!63;CL:0000559!5.45e-14!63;CL:0000738!2.29e-12!140;CL:0000763!7.15e-11!112;CL:0000049!7.15e-11!112;CL:0002031!1.02e-08!124;CL:0000037!3.11e-07!172;CL:0000566!3.11e-07!172;CL:0000988!6.31e-07!182;CL:0002087!6.38e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.35e-37;33!CL:0002057;3.35e-37;33!CL:0000473;1.41e-25;39!CL:0000234;1.41e-25;39!CL:0000576;3.15e-16;48!CL:0000766;1.26e-13;69!CL:0000771;1.53e-09;2!CL:0000097;1.63e-07;5 | |ontology_enrichment_celltype_v019=CL:0000860;3.35e-37;33!CL:0002057;3.35e-37;33!CL:0000473;1.41e-25;39!CL:0000234;1.41e-25;39!CL:0000576;3.15e-16;48!CL:0000766;1.26e-13;69!CL:0000771;1.53e-09;2!CL:0000097;1.63e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.63e-31,42;CL:0002057,2.63e-31,42;CL:0000766,2.01e-29,72;CL:0000473,8.47e-27,48;CL:0000234,8.47e-27,48;CL:0000557,1.40e-26,67;CL:0000839,1.64e-24,66;CL:0002009,4.83e-22,61;CL:0002194,1.70e-20,59;CL:0000576,1.70e-20,59;CL:0000040,1.70e-20,59;CL:0000559,1.70e-20,59;CL:0000763,2.18e-19,108;CL:0000049,2.18e-19,108;CL:0000738,1.93e-15,136;CL:0002031,9.15e-14,120;CL:0002032,4.51e-12,161;CL:0000837,4.51e-12,161;CL:0000988,2.00e-11,177;CL:0000037,2.60e-11,168;CL:0000771,1.30e-09,2;CL:0002087,1.73e-09,115;CL:0000097,1.18e-07,5;CL:0002028,1.18e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.42e-22;42 | |ontology_enrichment_development_v019=CL:0002057;3.42e-22;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.22e-15!57;UBERON:0005068!1.22e-15!57;UBERON:0006241!1.22e-15!57;UBERON:0007135!1.22e-15!57;UBERON:0007023!2.87e-15!115;UBERON:0002371!3.59e-15!80;UBERON:0002390!3.04e-13!102;UBERON:0003061!3.04e-13!102;UBERON:0001474!3.32e-13!86;UBERON:0002780!8.29e-13!41;UBERON:0001890!8.29e-13!41;UBERON:0006240!8.29e-13!41;UBERON:0002616!8.83e-13!59;UBERON:0003080!2.57e-12!42;UBERON:0001017!5.37e-12!82;UBERON:0002193!1.53e-11!112;UBERON:0005743!1.56e-11!86;UBERON:0004765!2.00e-11!101;UBERON:0001434!2.00e-11!101;UBERON:0000955!5.77e-11!69;UBERON:0006238!5.77e-11!69;UBERON:0003075!3.14e-10!86;UBERON:0007284!3.14e-10!86;UBERON:0002020!3.94e-10!34;UBERON:0003528!3.94e-10!34;UBERON:0001893!4.48e-10!34;UBERON:0002405!1.66e-09!115;UBERON:0000073!2.29e-09!94;UBERON:0001016!2.29e-09!94;UBERON:0002791!2.50e-09!33;UBERON:0002346!2.73e-09!90;UBERON:0001869!6.67e-09!32;UBERON:0002308!6.47e-07!9;UBERON:0000125!6.47e-07!9;UBERON:0002619!7.74e-07!22;UBERON:0003056!8.94e-07!61 | |ontology_enrichment_uberon=UBERON:0001049!1.22e-15!57;UBERON:0005068!1.22e-15!57;UBERON:0006241!1.22e-15!57;UBERON:0007135!1.22e-15!57;UBERON:0007023!2.87e-15!115;UBERON:0002371!3.59e-15!80;UBERON:0002390!3.04e-13!102;UBERON:0003061!3.04e-13!102;UBERON:0001474!3.32e-13!86;UBERON:0002780!8.29e-13!41;UBERON:0001890!8.29e-13!41;UBERON:0006240!8.29e-13!41;UBERON:0002616!8.83e-13!59;UBERON:0003080!2.57e-12!42;UBERON:0001017!5.37e-12!82;UBERON:0002193!1.53e-11!112;UBERON:0005743!1.56e-11!86;UBERON:0004765!2.00e-11!101;UBERON:0001434!2.00e-11!101;UBERON:0000955!5.77e-11!69;UBERON:0006238!5.77e-11!69;UBERON:0003075!3.14e-10!86;UBERON:0007284!3.14e-10!86;UBERON:0002020!3.94e-10!34;UBERON:0003528!3.94e-10!34;UBERON:0001893!4.48e-10!34;UBERON:0002405!1.66e-09!115;UBERON:0000073!2.29e-09!94;UBERON:0001016!2.29e-09!94;UBERON:0002791!2.50e-09!33;UBERON:0002346!2.73e-09!90;UBERON:0001869!6.67e-09!32;UBERON:0002308!6.47e-07!9;UBERON:0000125!6.47e-07!9;UBERON:0002619!7.74e-07!22;UBERON:0003056!8.94e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.90e-10;4!UBERON:0010133;2.90e-10;4!UBERON:0000007;4.64e-10;2 | |ontology_enrichment_uberon_v019=UBERON:0003296;2.90e-10;4!UBERON:0010133;2.90e-10;4!UBERON:0000007;4.64e-10;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.37e-23,76;UBERON:0001474,9.59e-21,82;UBERON:0004765,3.37e-20,90;UBERON:0002390,3.97e-18,98;UBERON:0003061,3.97e-18,98;UBERON:0002405,1.17e-17,93;UBERON:0001434,1.28e-17,100;UBERON:0002193,6.24e-16,108;UBERON:0003296,3.84e-10,4;UBERON:0010133,3.84e-10,4;UBERON:0000007,4.65e-10,2;UBERON:0002204,2.96e-09,167;UBERON:0000073,9.36e-07,53;UBERON:0002616,9.36e-07,53 | |||
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| ||
|short_description=p5@PEX5 | |short_description=p5@PEX5 | ||
}} | }} |
Latest revision as of 19:03, 24 September 2015
Short description: | p5@PEX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PEX5_5end |
Coexpression cluster: | C155_pituitary_placenta_nonsmall_cervical_smallcell_choriocarcinoma_epitheloid |
Association with transcript: | 0bp_to_ENST00000540398_5end |
EntrezGene: | PEX5 |
HGNC: | 9719 |
UniProt: | F5H432 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.63e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.63e-31 | 42 |
myeloid leukocyte | 2.01e-29 | 72 |
defensive cell | 8.47e-27 | 48 |
phagocyte | 8.47e-27 | 48 |
granulocyte monocyte progenitor cell | 1.40e-26 | 67 |
myeloid lineage restricted progenitor cell | 1.64e-24 | 66 |
macrophage dendritic cell progenitor | 4.83e-22 | 61 |
monopoietic cell | 1.70e-20 | 59 |
monocyte | 1.70e-20 | 59 |
monoblast | 1.70e-20 | 59 |
promonocyte | 1.70e-20 | 59 |
myeloid cell | 2.18e-19 | 108 |
common myeloid progenitor | 2.18e-19 | 108 |
leukocyte | 1.93e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 9.15e-14 | 120 |
hematopoietic oligopotent progenitor cell | 4.51e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.51e-12 | 161 |
hematopoietic cell | 2.00e-11 | 177 |
hematopoietic stem cell | 2.60e-11 | 168 |
eosinophil | 1.30e-09 | 2 |
nongranular leukocyte | 1.73e-09 | 115 |
mast cell | 1.18e-07 | 5 |
basophil mast progenitor cell | 1.18e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.37e-23 | 76 |
bone element | 9.59e-21 | 82 |
skeletal element | 3.37e-20 | 90 |
hematopoietic system | 3.97e-18 | 98 |
blood island | 3.97e-18 | 98 |
immune system | 1.17e-17 | 93 |
skeletal system | 1.28e-17 | 100 |
hemolymphoid system | 6.24e-16 | 108 |
gland of diencephalon | 3.84e-10 | 4 |
neuroendocrine gland | 3.84e-10 | 4 |
pituitary gland | 4.65e-10 | 2 |
musculoskeletal system | 2.96e-09 | 167 |
regional part of nervous system | 9.36e-07 | 53 |
regional part of brain | 9.36e-07 | 53 |