FFCP PHASE1:Hg19::chrX:25034067..25034088,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:25034067..25034088,- to FFCP PHASE1:Hg19::chrX:25034067..25034088,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=170302 | |EntrezGene=170302 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18060 | |HGNC=18060 | ||
|TSSclassifier=strong | |||
|UniProt=Q96QS3 | |UniProt=Q96QS3 | ||
|association_with_transcript=-2bp_to_ENST00000379044,NM_139058,uc004dbp.3_5end | |||
|cluster_id=chrX:25034067..25034088,- | |||
|description=CAGE_peak_1_at_ARX_5end | |||
|id=chrX:25034067..25034088,- | |||
|ontology_enrichment_celltype=CL:0000047!4.19e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.81e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.82e-07,3;CL:0000047,5.57e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.80e-13;82 | |||
|ontology_enrichment_disease=DOID:3095!4.52e-08!22;DOID:2994!4.52e-08!22;DOID:171!1.99e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;9.87e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,9.87e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002780!5.57e-46!41;UBERON:0001890!5.57e-46!41;UBERON:0006240!5.57e-46!41;UBERON:0003080!1.66e-44!42;UBERON:0001049!1.11e-41!57;UBERON:0005068!1.11e-41!57;UBERON:0006241!1.11e-41!57;UBERON:0007135!1.11e-41!57;UBERON:0001017!2.70e-41!82;UBERON:0001893!6.76e-40!34;UBERON:0005743!7.43e-40!86;UBERON:0000073!8.36e-40!94;UBERON:0001016!8.36e-40!94;UBERON:0002020!3.25e-39!34;UBERON:0003528!3.25e-39!34;UBERON:0002791!8.06e-39!33;UBERON:0001869!2.03e-38!32;UBERON:0002616!6.77e-38!59;UBERON:0007023!1.85e-36!115;UBERON:0002346!3.04e-35!90;UBERON:0000955!2.31e-34!69;UBERON:0006238!2.31e-34!69;UBERON:0003056!2.89e-34!61;UBERON:0003075!5.30e-31!86;UBERON:0007284!5.30e-31!86;UBERON:0000956!5.34e-31!25;UBERON:0000203!5.34e-31!25;UBERON:0000924!5.29e-28!173;UBERON:0006601!5.29e-28!173;UBERON:0002619!2.15e-27!22;UBERON:0000153!2.09e-25!129;UBERON:0007811!2.09e-25!129;UBERON:0001950!3.34e-25!20;UBERON:0004121!9.48e-25!169;UBERON:0000033!1.10e-24!123;UBERON:0001871!1.59e-10!7;UBERON:0002420!1.79e-10!9;UBERON:0007245!1.79e-10!9;UBERON:0010009!1.79e-10!9;UBERON:0010011!1.79e-10!9;UBERON:0000454!1.79e-10!9;UBERON:0000922!1.02e-09!612;UBERON:0002308!1.26e-09!9;UBERON:0000125!1.26e-09!9;UBERON:0000064!1.85e-09!219;UBERON:0000481!1.24e-08!347;UBERON:0009663!2.77e-08!7;UBERON:0000200!2.88e-08!6;UBERON:0001894!1.89e-07!7;UBERON:0006222!1.89e-07!7;UBERON:0002050!2.49e-07!605;UBERON:0005423!2.49e-07!605;UBERON:0002021!2.57e-07!5;UBERON:0001872!2.92e-07!5;UBERON:0000468!3.69e-07!659;UBERON:0000923!4.75e-07!604;UBERON:0005291!4.75e-07!604;UBERON:0006598!4.75e-07!604;UBERON:0002532!4.75e-07!604;UBERON:0000349!5.40e-07!5;UBERON:0000475!6.27e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.24e-56;32!UBERON:0001893;6.40e-54;34!UBERON:0002791;1.96e-53;32!UBERON:0003528;4.68e-51;34!UBERON:0002020;4.68e-51;34!UBERON:0000956;6.07e-50;25!UBERON:0000203;6.07e-50;25!UBERON:0002780;1.44e-49;41!UBERON:0001890;1.44e-49;41!UBERON:0002619;5.34e-44;22!UBERON:0001950;2.19e-40;20!UBERON:0000073;5.50e-32;53!UBERON:0002616;5.50e-32;53!UBERON:0000955;8.53e-23;68!UBERON:0001017;5.30e-21;75!UBERON:0001016;1.46e-18;83!UBERON:0001871;1.93e-14;6!UBERON:0002420;1.80e-13;9!UBERON:0007245;1.80e-13;9!UBERON:0010009;1.80e-13;9!UBERON:0010011;1.80e-13;9!UBERON:0000454;1.80e-13;9!UBERON:0000200;1.46e-12;6!UBERON:0000922;1.34e-11;49!UBERON:0002021;5.36e-11;5!UBERON:0001872;6.51e-11;5!UBERON:0000349;1.76e-10;5!UBERON:0007023;2.68e-10;114!UBERON:0009663;5.72e-10;7!UBERON:0002346;6.70e-10;4!UBERON:0000923;6.70e-10;4!UBERON:0010316;6.70e-10;4!UBERON:0005291;6.70e-10;4!UBERON:0000125;7.07e-10;9!UBERON:0002308;7.07e-10;9!UBERON:0001894;9.64e-09;7!UBERON:0011216;1.24e-08;132!UBERON:0000369;1.88e-08;4!UBERON:0002435;1.88e-08;4!UBERON:0000204;1.88e-08;4!UBERON:0002050;7.19e-08;5!UBERON:0005423;7.19e-08;5!UBERON:0001870;4.11e-07;3!UBERON:0005383;9.18e-07;3!UBERON:0005382;9.18e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,8.91e-69,41;UBERON:0001890,8.91e-69,41;UBERON:0003080,8.91e-69,41;UBERON:0006240,8.91e-69,41;UBERON:0001869,3.34e-62,32;UBERON:0001893,1.17e-61,34;UBERON:0002791,2.83e-58,32;UBERON:0003528,1.60e-57,34;UBERON:0002020,1.60e-57,34;UBERON:0000073,8.62e-56,53;UBERON:0002616,8.62e-56,53;UBERON:0001017,1.25e-53,81;UBERON:0001016,2.17e-53,89;UBERON:0001049,3.83e-52,56;UBERON:0005068,3.83e-52,56;UBERON:0006241,3.83e-52,56;UBERON:0007135,3.83e-52,56;UBERON:0000956,5.85e-50,25;UBERON:0000203,5.85e-50,25;UBERON:0003056,4.32e-49,61;UBERON:0000955,2.80e-47,68;UBERON:0006238,2.80e-47,68;UBERON:0002619,5.15e-44,22;UBERON:0002346,4.85e-43,86;UBERON:0001950,2.11e-40,20;UBERON:0003075,1.06e-36,82;UBERON:0007284,1.06e-36,82;UBERON:0007023,9.91e-34,114;UBERON:0004121,3.81e-31,171;UBERON:0000924,3.81e-31,171;UBERON:0006601,3.81e-31,171;UBERON:0010371,3.67e-26,104;UBERON:0011216,4.91e-24,223;UBERON:0010314,2.61e-22,132;UBERON:0001871,1.88e-14,6;UBERON:0002420,1.79e-13,9;UBERON:0007245,1.79e-13,9;UBERON:0010009,1.79e-13,9;UBERON:0010011,1.79e-13,9;UBERON:0000454,1.79e-13,9;UBERON:0000200,1.48e-12,6;UBERON:0002021,5.31e-11,5;UBERON:0001872,6.51e-11,5;UBERON:0000349,1.78e-10,5;UBERON:0009663,5.73e-10,7;UBERON:0000125,7.99e-10,9;UBERON:0002308,7.99e-10,9;UBERON:0000025,2.30e-09,192;UBERON:0001894,1.00e-08,7;UBERON:0006222,1.00e-08,7;UBERON:0000369,1.90e-08,4;UBERON:0002435,1.90e-08,4;UBERON:0000204,1.90e-08,4;UBERON:0010082,1.90e-08,4;UBERON:0000922,4.47e-08,592;UBERON:0001870,4.07e-07,3;UBERON:0000923,5.87e-07,560;UBERON:0010316,5.87e-07,560;UBERON:0005291,5.87e-07,560;UBERON:0006598,5.87e-07,560;UBERON:0010317,5.87e-07,560;UBERON:0002532,5.87e-07,560;UBERON:0005383,9.10e-07,3;UBERON:0005382,9.10e-07,3;UBERON:0002050,9.21e-07,564 | |||
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| ||
|short_description=p1@ARX | |||
}} | }} |
Latest revision as of 18:57, 24 September 2015
Short description: | p1@ARX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARX_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000379044, NM_139058, uc004dbp.3_5end |
EntrezGene: | ARX |
HGNC: | 18060 |
UniProt: | Q96QS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.82e-07 | 3 |
neuronal stem cell | 5.57e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 9.87e-08 | 10 |