FFCP PHASE1:Hg19::chr6:132270532..132270550,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1490 | |EntrezGene=1490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2500 | |HGNC=2500 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-145bp_to_AF127918_5end | |association_with_transcript=-145bp_to_AF127918_5end | ||
|cluster_id=chr6:132270532..132270550,- | |||
|coexpression_cluster_id=C506 | |coexpression_cluster_id=C506 | ||
|description=CAGE_peak_9_at_CTGF_5end | |description=CAGE_peak_9_at_CTGF_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.21e-26!180;CL:0000222!1.53e-23!119;CL:0000680!1.56e-17!57;CL:0000056!1.56e-17!57;CL:0000355!1.56e-17!57;CL:0000192!6.00e-17!42;CL:0000514!6.00e-17!42;CL:0000187!2.41e-16!54;CL:0000183!2.52e-16!59;CL:0000393!6.56e-15!60;CL:0000211!6.56e-15!60;CL:0000359!1.76e-14!32;CL:0000220!9.15e-14!246;CL:0002321!2.48e-13!248;CL:0000057!2.18e-11!75;CL:0002139!8.46e-09!24;CL:0002371!1.04e-08!591;CL:0000144!2.89e-08!625;CL:0000213!7.18e-08!57;CL:0000215!7.18e-08!57;CL:0000115!9.31e-08!35;CL:0002334!1.34e-07!12;CL:0000548!2.94e-07!679;CL:0000004!2.94e-07!679;CL:0000255!2.94e-07!679;CL:0002494!5.07e-07!16;CL:0002078!5.34e-07!44;CL:0000012!6.67e-07!682 | |ontology_enrichment_celltype=CL:0000055!1.21e-26!180;CL:0000222!1.53e-23!119;CL:0000680!1.56e-17!57;CL:0000056!1.56e-17!57;CL:0000355!1.56e-17!57;CL:0000192!6.00e-17!42;CL:0000514!6.00e-17!42;CL:0000187!2.41e-16!54;CL:0000183!2.52e-16!59;CL:0000393!6.56e-15!60;CL:0000211!6.56e-15!60;CL:0000359!1.76e-14!32;CL:0000220!9.15e-14!246;CL:0002321!2.48e-13!248;CL:0000057!2.18e-11!75;CL:0002139!8.46e-09!24;CL:0002371!1.04e-08!591;CL:0000144!2.89e-08!625;CL:0000213!7.18e-08!57;CL:0000215!7.18e-08!57;CL:0000115!9.31e-08!35;CL:0002334!1.34e-07!12;CL:0000548!2.94e-07!679;CL:0000004!2.94e-07!679;CL:0000255!2.94e-07!679;CL:0002494!5.07e-07!16;CL:0002078!5.34e-07!44;CL:0000012!6.67e-07!682 | ||
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|ontology_enrichment_celltype_v019_2=CL:0000222,1.20e-15,121;CL:0000359,4.48e-14,32;CL:0000192,1.64e-13,43;CL:0000514,1.64e-13,43;CL:0000057,3.51e-12,76;CL:0002334,4.68e-11,12;CL:0000680,9.37e-11,58;CL:0000056,9.37e-11,58;CL:0000355,9.37e-11,58;CL:0000187,5.58e-10,55;CL:0000393,5.65e-10,61;CL:0000211,5.65e-10,61;CL:0000115,5.60e-09,36;CL:0002321,9.20e-09,250;CL:0002139,3.14e-08,24;CL:0002078,7.26e-08,45;CL:0000048,7.66e-08,427;CL:0000723,2.05e-07,433;CL:0000071,2.20e-07,18;CL:0002546,2.20e-07,18;CL:0000034,7.19e-07,441;CL:1000413,9.29e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000514;2.07e-09;43!CL:0002546;3.09e-07;18 | |ontology_enrichment_development_v019=CL:0000514;2.07e-09;43!CL:0002546;3.09e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p9@CTGF | |short_description=p9@CTGF | ||
}} | }} |
Latest revision as of 18:57, 24 September 2015
Short description: | p9@CTGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CTGF_5end |
Coexpression cluster: | C506_Smooth_Renal_Endothelial_hepatic_Adipocyte_Fibroblast_Preadipocyte |
Association with transcript: | -145bp_to_AF127918_5end |
EntrezGene: | CTGF |
HGNC: | 2500 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.20e-15 | 121 |
vascular associated smooth muscle cell | 4.48e-14 | 32 |
smooth muscle cell | 1.64e-13 | 43 |
smooth muscle myoblast | 1.64e-13 | 43 |
fibroblast | 3.51e-12 | 76 |
preadipocyte | 4.68e-11 | 12 |
muscle precursor cell | 9.37e-11 | 58 |
myoblast | 9.37e-11 | 58 |
multi-potent skeletal muscle stem cell | 9.37e-11 | 58 |
muscle cell | 5.58e-10 | 55 |
electrically responsive cell | 5.65e-10 | 61 |
electrically active cell | 5.65e-10 | 61 |
endothelial cell | 5.60e-09 | 36 |
embryonic cell | 9.20e-09 | 250 |
endothelial cell of vascular tree | 3.14e-08 | 24 |
meso-epithelial cell | 7.26e-08 | 45 |
multi fate stem cell | 7.66e-08 | 427 |
somatic stem cell | 2.05e-07 | 433 |
blood vessel endothelial cell | 2.20e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.20e-07 | 18 |
stem cell | 7.19e-07 | 441 |
endothelial cell of artery | 9.29e-07 | 9 |