FFCP PHASE1:Hg19::chr1:209602156..209602174,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=642587 | |EntrezGene=642587 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=43562 | |HGNC=43562 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000366437,ENST00000429156,ENST00000433108,NM_001104548,uc009xcn.2_5end | |association_with_transcript=0bp_to_ENST00000366437,ENST00000429156,ENST00000433108,NM_001104548,uc009xcn.2_5end | ||
|cluster_id=chr1:209602156..209602174,+ | |||
|coexpression_cluster_id=C2560 | |coexpression_cluster_id=C2560 | ||
|description=CAGE_peak_1_at_MIR205HG_5end | |description=CAGE_peak_1_at_MIR205HG_5end | ||
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|ontology_enrichment_celltype=CL:0002076!4.63e-23!43;CL:0000066!4.88e-22!254;CL:0000223!7.62e-18!59;CL:0002251!3.62e-11!21;CL:0002368!3.77e-11!13;CL:0002159!7.99e-08!13;CL:0002202!4.51e-07!9;CL:0002632!4.51e-07!9 | |ontology_enrichment_celltype=CL:0002076!4.63e-23!43;CL:0000066!4.88e-22!254;CL:0000223!7.62e-18!59;CL:0002251!3.62e-11!21;CL:0002368!3.77e-11!13;CL:0002159!7.99e-08!13;CL:0002202!4.51e-07!9;CL:0002632!4.51e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.59e-19;42!CL:0002368;1.98e-13;13!CL:0002251;2.14e-13;20!CL:0002159;1.14e-08;14!CL:0002202;1.92e-08;9!CL:0002632;1.92e-08;9!CL:0000622;2.49e-07;5!CL:0000039;6.46e-07;7!CL:0000586;6.46e-07;7 | |ontology_enrichment_celltype_v019=CL:0002076;1.59e-19;42!CL:0002368;1.98e-13;13!CL:0002251;2.14e-13;20!CL:0002159;1.14e-08;14!CL:0002202;1.92e-08;9!CL:0002632;1.92e-08;9!CL:0000622;2.49e-07;5!CL:0000039;6.46e-07;7!CL:0000586;6.46e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.37e-25,42;CL:0000066,5.20e-25,253;CL:0000223,9.03e-19,58;CL:0002368,2.03e-13,13;CL:0002251,2.14e-13,20;CL:0002159,1.14e-08,14;CL:0002202,1.97e-08,9;CL:0002632,1.97e-08,9;CL:0000622,2.49e-07,5;CL:0000039,6.57e-07,7;CL:0000586,6.57e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000223;1.73e-10;58 | |ontology_enrichment_development_v019=CL:0000223;1.73e-10;58 | ||
|ontology_enrichment_disease=DOID:1749!1.84e-13!14;DOID:305!2.81e-09!106 | |ontology_enrichment_disease=DOID:1749!1.84e-13!14;DOID:305!2.81e-09!106 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.33e-14;14 | |ontology_enrichment_disease_v019=DOID:1749;2.33e-14;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,2.31e-14,14;DOID:305,2.14e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.46e-15!169;UBERON:0000925!2.46e-15!169;UBERON:0006595!2.46e-15!169;UBERON:0001004!4.07e-14!72;UBERON:0000464!6.09e-13!104;UBERON:0000161!1.47e-12!35;UBERON:0000077!2.30e-10!130;UBERON:0000166!4.41e-10!21;UBERON:0000466!8.71e-10!126;UBERON:0001007!1.03e-09!155;UBERON:0001555!1.03e-09!155;UBERON:0007026!1.03e-09!155;UBERON:0000165!7.51e-09!28;UBERON:0000930!7.51e-09!28;UBERON:0000065!9.82e-09!53;UBERON:0001008!2.05e-08!45;UBERON:0005178!4.62e-08!34;UBERON:0002224!4.62e-08!34;UBERON:0005156!5.42e-08!59;UBERON:0000990!5.42e-08!59;UBERON:0006554!6.68e-08!44;UBERON:0003101!9.84e-08!22;UBERON:0000079!9.84e-08!22;UBERON:0005181!1.22e-07!35;UBERON:0005153!1.26e-07!37;UBERON:0003135!1.52e-07!11;UBERON:0004921!1.54e-07!129;UBERON:0004185!1.54e-07!129;UBERON:0000344!1.61e-07!12;UBERON:0007196!4.61e-07!14;UBERON:0001558!4.61e-07!14;UBERON:0003102!4.72e-07!95;UBERON:0005911!7.23e-07!82;UBERON:0005631!7.97e-07!14;UBERON:0000158!7.97e-07!14;UBERON:0003133!8.79e-07!48 | |ontology_enrichment_uberon=UBERON:0004119!2.46e-15!169;UBERON:0000925!2.46e-15!169;UBERON:0006595!2.46e-15!169;UBERON:0001004!4.07e-14!72;UBERON:0000464!6.09e-13!104;UBERON:0000161!1.47e-12!35;UBERON:0000077!2.30e-10!130;UBERON:0000166!4.41e-10!21;UBERON:0000466!8.71e-10!126;UBERON:0001007!1.03e-09!155;UBERON:0001555!1.03e-09!155;UBERON:0007026!1.03e-09!155;UBERON:0000165!7.51e-09!28;UBERON:0000930!7.51e-09!28;UBERON:0000065!9.82e-09!53;UBERON:0001008!2.05e-08!45;UBERON:0005178!4.62e-08!34;UBERON:0002224!4.62e-08!34;UBERON:0005156!5.42e-08!59;UBERON:0000990!5.42e-08!59;UBERON:0006554!6.68e-08!44;UBERON:0003101!9.84e-08!22;UBERON:0000079!9.84e-08!22;UBERON:0005181!1.22e-07!35;UBERON:0005153!1.26e-07!37;UBERON:0003135!1.52e-07!11;UBERON:0004921!1.54e-07!129;UBERON:0004185!1.54e-07!129;UBERON:0000344!1.61e-07!12;UBERON:0007196!4.61e-07!14;UBERON:0001558!4.61e-07!14;UBERON:0003102!4.72e-07!95;UBERON:0005911!7.23e-07!82;UBERON:0005631!7.97e-07!14;UBERON:0000158!7.97e-07!14;UBERON:0003133!8.79e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0000161;9.58e-11;19!UBERON:0000166;9.58e-11;19!UBERON:0000165;1.65e-09;28!UBERON:0003135;5.56e-09;11!UBERON:0003101;1.42e-08;22!UBERON:0000079;1.42e-08;22!UBERON:0000344;3.05e-08;20!UBERON:0005178;5.64e-08;34!UBERON:0002224;5.64e-08;34!UBERON:0000974;7.68e-08;6!UBERON:0000365;1.30e-07;5!UBERON:0001044;2.75e-07;6!UBERON:0003293;2.75e-07;6!UBERON:0003294;2.75e-07;6!UBERON:0010047;2.75e-07;6!UBERON:0003408;2.75e-07;6!UBERON:0000167;2.75e-07;6!UBERON:0005911;3.02e-07;36!UBERON:0005181;3.69e-07;35!UBERON:0001004;3.82e-07;65!UBERON:0007196;9.00e-07;15!UBERON:0001558;9.00e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000161;9.58e-11;19!UBERON:0000166;9.58e-11;19!UBERON:0000165;1.65e-09;28!UBERON:0003135;5.56e-09;11!UBERON:0003101;1.42e-08;22!UBERON:0000079;1.42e-08;22!UBERON:0000344;3.05e-08;20!UBERON:0005178;5.64e-08;34!UBERON:0002224;5.64e-08;34!UBERON:0000974;7.68e-08;6!UBERON:0000365;1.30e-07;5!UBERON:0001044;2.75e-07;6!UBERON:0003293;2.75e-07;6!UBERON:0003294;2.75e-07;6!UBERON:0010047;2.75e-07;6!UBERON:0003408;2.75e-07;6!UBERON:0000167;2.75e-07;6!UBERON:0005911;3.02e-07;36!UBERON:0005181;3.69e-07;35!UBERON:0001004;3.82e-07;65!UBERON:0007196;9.00e-07;15!UBERON:0001558;9.00e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.27e-16,74;UBERON:0004119,2.28e-15,160;UBERON:0000925,2.28e-15,160;UBERON:0006595,2.28e-15,160;UBERON:0000161,3.50e-14,36;UBERON:0000166,1.04e-11,22;UBERON:0001008,1.42e-10,48;UBERON:0000065,4.41e-10,54;UBERON:0006554,6.05e-10,47;UBERON:0001007,1.30e-09,145;UBERON:0001555,1.30e-09,145;UBERON:0007026,1.30e-09,145;UBERON:0000165,5.35e-09,29;UBERON:0000930,5.35e-09,29;UBERON:0003135,5.35e-09,11;UBERON:0005178,8.02e-09,34;UBERON:0002224,8.02e-09,34;UBERON:0003102,1.24e-08,99;UBERON:0003101,1.38e-08,22;UBERON:0000079,1.38e-08,22;UBERON:0005153,1.97e-08,37;UBERON:0005181,2.08e-08,35;UBERON:0004921,2.16e-08,118;UBERON:0005156,2.26e-08,59;UBERON:0000990,2.26e-08,59;UBERON:0000344,3.06e-08,20;UBERON:0005631,3.31e-08,14;UBERON:0000158,3.31e-08,14;UBERON:0000153,1.06e-07,62;UBERON:0007811,1.06e-07,62;UBERON:0000365,1.30e-07,5;UBERON:0001041,1.94e-07,87;UBERON:0000974,2.69e-07,10;UBERON:0001044,2.76e-07,6;UBERON:0003293,2.76e-07,6;UBERON:0003294,2.76e-07,6;UBERON:0010047,2.76e-07,6;UBERON:0000167,2.76e-07,6;UBERON:0003133,2.84e-07,48;UBERON:0005157,3.08e-07,47;UBERON:0005911,5.12e-07,82;UBERON:0003408,7.02e-07,10;UBERON:0003124,8.09e-07,7;UBERON:0007196,9.12e-07,15;UBERON:0001558,9.12e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,1.56711376919903,7.12628415854376,10.4670175195864,15.2908960491121,22.9477271058755,0,0,0,0,0,0,0,0,0,0,0,0,13.1431057886476,14.6960055115403,12.6724357915024,0,0,6.50227717927519,444.080451423322,387.652017467608,1046.77360278218,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,33.2969726448353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,5.56661070865279,973.03271502938,728.591430071404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4406205754817,0,0,0,0,0,0,0,0,0,0,895.301089048623,0,0,0,0,1.06400514659507,15.6989728039846,0,0,0,0,0,0,0,0,0,10.8389646093445,0,0,0.161872944368132,0.561803226808994,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,543.836040801517,482.760633445777,652.193649914595,42.812770851488,10.3373219290759,29.6294554317272,71.8371111256517,63.3325335697827,4.37972830890996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71608664490597,0,915.09787973712,997.003551395085,474.798336700132,857.739355948618,0,0,0,0,0,0,0,0,2.37061319387782,2.57545848628462,0,0,0,448.047726456794,642.867604617035,511.808101045015,788.562792398579,617.015851465141,702.357068230667,0,0,0.414656231081544,0.288239906833923,0.6312121671319,0.825472625798197,0,0,59.8753561079468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,5.17365356462525,0,1.10621501125022,0,0,0,0,0,0,10.0032098577266,3.32870879020994,14.212343786495,0,0,0,0,0,0,0,0,0,0,0,0,3.50492403815704,309.381483677969,1465.10061495905,0,0,0.917870904715969,25.2671783228151,7.77854904754589,5.49044838423799,0,2.00548094896464,0,0,0,0,0,0.501689773854853,12.998689925297,7.47968408035852,2.46262230194396,0,0,0,0,0,14.837905677272,0,0,855.655651614297,736.518258759378,0,0,0,0,0,0,0,0.255679882248303,0,1613.34605883851,1186.00490571007,2314.25654108928,1045.66798070382,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,2.16876448669825,0,0,0,0,0,0.211107635297664,0,0,0,1373.28199281851,729.959178058473,532.476915971867,16.3810213351596,954.860916584788,744.643922450905,828.770956960047,1331.93627439995,0,0,0,0,0,0,0,0,0.320472213382419,0,412.647723712057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,124.482260237943,0,3.81991175580304,18.4118102116236,1.84296421259539,0,0,0,0,0.63337622438398,32.6766700731754,0,0,0,1.23084805461069,0,62.6382407496868,0,0,70.9246086529553,0,0,0,0,0,1.82299432759663,0,68.1499600908706,891.799254213461,9.40738506083235,17.4926884508273,0,0,0,0,0,0,0,0,0,0,1739.59005736413,65.7924710207465,0,4.84184199214926,8.43721857451858,8.47449500991663,17.5450637852556,135.839231014962,49.572234169733,0,0,0,0,0,0,0,0,0,1.30586246527318,5.08871057162187,0,0,0,0,0,0,0,0,0,0,0,398.177499526803,1.94224303627274,186.243838144912,0,0,0.063186579628488,0,0,0,0,0,0,0,7.48843234270949,0.347119476670262,550.423296276559,322.554360380391,263.662542377223,0,0,0,0,319.287842279877,0,39.9985911181542,0,0,0,138.450378976241,2.00397050628834,0,25.3758204169305,0.432271251462318,0,0,0,0.248505071130865,182.4271827934,0.135904206073614,0.627617077873999,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,0,19.9679000498991,0,0,0.470284307407084,0,0,0,0,0,0.196854963029498,29.0429528985641,0,0,23.4699596758928,21.4561521091685,30.3271446761305,2.4747128070665,20.1188508185067,0.121499113316049,1183.07814316261,0.551639951094387,4.09145787452985,0,0,510.302509672405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,317.166760042502,10.6787412567695,6.60258081418597,4.97086866416635,0,0.790446527591777,0,1269.66076170489,0,0,0,0,12.2502195075183,0,0,0,0,0,0,0,411.935424643103,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0.194860308839388,0.398594520940089,0.490696182767533,0,0,74.804491668954,0,0,0,0,0,4665.68097998207,1950.8342874634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,658.37489570488,395.788421831669,925.764136738914,421.899732781035,0,0,0,0.150420656698515,0,0,18.8572820026624,0,7.39280431085226,0.0675375846183947,0,0,0,0,14.2547019382867,95.7687574291338,0,121.757593540534,0,0,1.21393120847326,2.50428410486427,30.8684248165983,0,0.342976018874837,0.0679697329768317,0.0657727735628491,0,23.5810572011187,110.047316176421,0,0.560544326627578,0,3.67076905071656,0,0.285906176706625,0,0,0,0,606.521712505209,649.925242296668,237.102064002233,58.0806934407375,0,0,152.419338068734,117.990037300186,0.93061915699296,0,0,0,0,0.647428837187895,0,0,196.712952188951,0,0,0,1.80713731262336,0.109940516745429,0,0,0,0.470317296361523,24.7599804971445,1.41405928260976,0,0,0.8453114551668,0,0,1.54698931136585,0.599646935549574,2402.08613606191,113.985043564168,6.9007575352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| ||
|short_description=p1@MIR205HG | |short_description=p1@MIR205HG | ||
}} | }} |
Latest revision as of 18:55, 24 September 2015
Short description: | p1@MIR205HG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR205HG_5end |
Coexpression cluster: | C2560_nasal_squamous_Small_cervical_Prostate_Tracheal_Urothelial |
Association with transcript: | 0bp_to_ENST00000366437, ENST00000429156, ENST00000433108, NM_001104548, uc009xcn.2_5end |
EntrezGene: | MIR205HG |
HGNC: | 43562 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.37e-25 | 42 |
epithelial cell | 5.20e-25 | 253 |
endodermal cell | 9.03e-19 | 58 |
respiratory epithelial cell | 2.03e-13 | 13 |
epithelial cell of alimentary canal | 2.14e-13 | 20 |
general ecto-epithelial cell | 1.14e-08 | 14 |
epithelial cell of tracheobronchial tree | 1.97e-08 | 9 |
epithelial cell of lower respiratory tract | 1.97e-08 | 9 |
acinar cell | 2.49e-07 | 5 |
germ line cell | 6.57e-07 | 7 |
germ cell | 6.57e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.31e-14 | 14 |
carcinoma | 2.14e-08 | 106 |