FFCP PHASE1:Hg19::chr2:219724517..219724538,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7475 | |EntrezGene=7475 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12785 | |HGNC=12785 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6F9 | |UniProt=Q9Y6F9 | ||
|association_with_transcript=-5bp_to_ENST00000233948_5end | |association_with_transcript=-5bp_to_ENST00000233948_5end | ||
|cluster_id=chr2:219724517..219724538,+ | |||
|description=CAGE_peak_1_at_WNT6_5end | |description=CAGE_peak_1_at_WNT6_5end | ||
|id=chr2:219724517..219724538,+ | |id=chr2:219724517..219724538,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.77e-10;7!CL:0000586;1.77e-10;7!CL:0002541;2.85e-09;3!CL:0000349;5.19e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.55e-10,7;CL:0000586,1.55e-10,7;CL:0002541,4.97e-09,3;CL:0000349,5.90e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.47e-07;29 | |||
|ontology_enrichment_disease=DOID:0050687!3.01e-14!143;DOID:305!3.69e-10!106;DOID:162!3.15e-07!235;DOID:3095!9.48e-07!22;DOID:2994!9.48e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.55e-07;22!DOID:2994;4.55e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.18e-10,143;DOID:3095,3.90e-07,22;DOID:2994,3.90e-07,22;DOID:305,7.65e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.15e-27!115;UBERON:0001737!1.97e-10!9;UBERON:0000062!1.81e-09!511;UBERON:0001049!2.42e-09!57;UBERON:0005068!2.42e-09!57;UBERON:0006241!2.42e-09!57;UBERON:0007135!2.42e-09!57;UBERON:0003124!1.34e-08!7;UBERON:0000064!4.20e-08!219;UBERON:0003080!5.38e-08!42;UBERON:0000073!6.13e-08!94;UBERON:0001016!6.13e-08!94;UBERON:0002346!1.08e-07!90;UBERON:0003133!1.66e-07!48;UBERON:0003075!1.86e-07!86;UBERON:0007284!1.86e-07!86;UBERON:0005631!2.55e-07!14;UBERON:0000158!2.55e-07!14;UBERON:0002780!2.57e-07!41;UBERON:0001890!2.57e-07!41;UBERON:0006240!2.57e-07!41;UBERON:0002616!3.92e-07!59;UBERON:0000924!5.68e-07!173;UBERON:0006601!5.68e-07!173;UBERON:0000955!7.78e-07!69;UBERON:0006238!7.78e-07!69;UBERON:0001557!7.96e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.17e-22;9!UBERON:0001557;1.17e-22;9!UBERON:0000478;1.54e-09;24!UBERON:0005631;1.73e-09;10!UBERON:0000158;1.73e-09;10!UBERON:0003124;2.85e-09;3!UBERON:0000920;2.85e-09;3!UBERON:0005383;1.52e-08;3!UBERON:0005382;1.52e-08;3!UBERON:0001987;9.23e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.30e-22,9;UBERON:0005631,2.17e-14,14;UBERON:0000158,2.17e-14,14;UBERON:0003124,5.92e-14,7;UBERON:0001557,9.15e-10,19;UBERON:0000478,1.69e-09,24;UBERON:0000920,4.97e-09,3;UBERON:0005383,1.70e-08,3;UBERON:0005382,1.70e-08,3;UBERON:0001987,6.87e-07,4;UBERON:0004340,6.87e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39334510984468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,1.39432731443422,1.45125477021519,0.504641701751257,0,0,0,0,0,0,2.01121560067735,2.36018566109342,1.68707720918437,2.31617342738027,1.30727666455444,1.66089433377768,2.02246962240247,1.37355025587742,3.46272441251751,0,0,0.4115740113314,0,0,0,0,0,2.33678033231916,0,0,0,0.100528972411631,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,1.66435439510497,4.23346410661552,0,0,0,0,0,0,0,0,0,0,0,0,2.65890789101569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.941438007767792,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,48.1239927631679,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53620382154229,0.671028323677248,1.16794399198336,0,0,0,0,0,0,0,0.586032717087576,0,0,0,1.43246690842614,35.6357616999166,0,0,0.140669416410513,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.185536196323703,0,1.30213880542617,0.0874599999961957,5.79999660347835,0.1137934482855,0,0.472775363535873,0.344743373241465,0,0,3.54296554325536,1.68835014075571,0,0.442317039724898,0,0.87754158861589,0.32681539055697,0.83654246567162,1.46205491157214,0.341826167541004,5.7640976097015,4.8469127981277,33.2460958081345,8.61303131276183,13.6480414168775,1.06606955203727,0,0,0,0,0,0,0,0,0,0,1.97894300007517,0,0,0.884575645033392,0,0,0,0,0.134802265961354,0.802577647298789,0.937057782901357,0,0.782658475728359,0,0.394584402849391,0,0,0.568679216656392,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0,0.52418000472609,0,0,0.0730893170861856,0.246346371159628,0.484945082442097,0,0.677942222341597,0,0.19871461170299,0.0633107959558787,0,0.160317640503067,0.426905989478705,9.79067086952438,0,0,0,0,0,0.707082103850386,0.271808412147228,0,0.713987523454252,0,0,0.547621515567972,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,1.39775300349294,1.28767814440971,1.11585728720936,0,0,0,0.0787831823072236,0.0824158583811665,0,0.196854963029498,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,6.37325906438606,0.157611414598396,0.314727528809989,0,0,1.72723677587501,0.714695326373367,3.97255182219259,1.77987976358325,0,0,0,0,0,0.170388021785422,2.15292973888239,0,0,0.129282956361551,0.26446520348538,0.171086837884329,0,0.213574825135389,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.3755727921195,1.14681839138014,0.221858103073705,0.372578417648301,0,0.124980407962107,0,0,0.235265819698172,1.40500471742064,1.7390523433299,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0.428883182749851,1.30497145982606,0.226705925512272,0,0,0,0.926404341482917,0,0,0,0,0.256241518587947,0,0,0.414775308455192,0,0,0,0.655219697692825,0,0,0,1.06691729694141,0,0,0,0,2.48830904013189,3.58104239650225,1.61737217095023,0.314531883711793,0,0.33946505990805,0,0.247871528518004,4.46915934378595,0,0,0,0,0,0.513833800771676,0,0.478901577171454,0,0,0.207471757392654,0,1.42769420259154,0,0.235939446695481,10.272001517214,0.231051332300676,0,0,0,0.601682626794058,0.60511520611056,0,22.0001623364395,0,0.887136517302272,0.135075169236789,0,0,0.0634158101939068,0.546974809018219,0,0.496211178389294,0,5.366021960863,0.535701835878287,0.336283722218824,0,0.227662191351298,2.57236873471653,0,0,0,0.131545547125698,0,0,0.627944742804112,1.09980912941201,0,0,0,0,1.42953088353313,0,23.3645264989932,0.347716544605159,0,0,0,0,0.430227358820278,0,0,0.423387050190929,1.8328549483524,0,0,0,0,0,0,0.307988420568741,0,1.45713297917742,0.233939463462106,12.3349480600048,0.118920090777569,0,0.219881033490858,0,0.154348316215889,0,0,0.245148321753905,0,0.588925401344836,0,2.5359343655004,0,1.2217909337381,1.16024198352439,0,0.178553938605658,0,0,1.46067277649303,0.458729283404541,0.716697915757256,2.52434499509095,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0.506794004045748,2.75369840303351,0.534434810531121,5.69748377116038,0,0.985123076837112,1.87574891109325,0.829169439458779,1.44806194206653,0.213233981900981,0.714193294391221,0,0.186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| ||
|short_description=p1@WNT6 | |short_description=p1@WNT6 | ||
}} | }} |
Latest revision as of 18:45, 24 September 2015
Short description: | p1@WNT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WNT6_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000233948_5end |
EntrezGene: | WNT6 |
HGNC: | 12785 |
UniProt: | Q9Y6F9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.55e-10 | 7 |
germ cell | 1.55e-10 | 7 |
chorionic membrane mesenchymal stem cell | 4.97e-09 | 3 |
extraembryonic cell | 5.90e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.30e-22 | 9 |
extraembryonic membrane | 2.17e-14 | 14 |
membranous layer | 2.17e-14 | 14 |
chorion | 5.92e-14 | 7 |
upper respiratory tract | 9.15e-10 | 19 |
extraembryonic structure | 1.69e-09 | 24 |
egg chorion | 4.97e-09 | 3 |
caudate-putamen | 1.70e-08 | 3 |
dorsal striatum | 1.70e-08 | 3 |
placenta | 6.87e-07 | 4 |
allantois | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.18e-10 | 143 |
germ cell and embryonal cancer | 3.90e-07 | 22 |
germ cell cancer | 3.90e-07 | 22 |
carcinoma | 7.65e-07 | 106 |