FFCP PHASE2:Hg19::chr18:74961811..74961822,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2587 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding |HGNC=HGNC:4132 |TSSclassifier=stro...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2587 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | ||
|HGNC= | |HGNC=4132 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P47211 | ||
|association_with_transcript=-185bp_to_NM_001480,uc002lms.3_5end | |association_with_transcript=-185bp_to_NM_001480,uc002lms.3_5end | ||
|cluster_id=chr18:74961811..74961822,+ | |cluster_id=chr18:74961811..74961822,+ |
Latest revision as of 18:42, 24 September 2015
Short description: | p2@GALR1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GALR1_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -185bp_to_NM_001480, uc002lms.3_5end |
EntrezGene: | GALR1 |
HGNC: | 4132 |
UniProt: | P47211 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@GALR1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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chondroblast | 7.67e-18 | 6 |
chondrocyte | 7.67e-18 | 6 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
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cartilage tissue | 4.27e-34 | 3 |
skeletal tissue | 4.27e-34 | 3 |
sympathetic nervous system | 5.15e-21 | 5 |
autonomic nervous system | 5.15e-21 | 5 |
peripheral nervous system | 2.45e-12 | 8 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
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chondrosarcoma | 9.37e-99 | 1 |
extraosseous chondrosarcoma | 9.37e-99 | 1 |
myxoid chondrosarcoma | 9.37e-99 | 1 |
extraskeletal myxoid chondrosarcoma | 9.37e-99 | 1 |
connective tissue cancer | 7.67e-18 | 6 |
musculoskeletal system cancer | 7.67e-18 | 6 |
neuroendocrine tumor | 9.07e-18 | 6 |
neuroectodermal tumor | 3.02e-11 | 10 |
Showing 1 to 8 of 8 entries