FFCP PHASE1:Hg19::chr5:134871645..134871660,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4762 | |EntrezGene=4762 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7764 | |HGNC=7764 | ||
|TSSclassifier=strong | |||
|UniProt=Q92886,F1T0H3 | |UniProt=Q92886,F1T0H3 | ||
|association_with_transcript=-6bp_to_ENST00000314744,NM_006161,uc003lax.2_5end | |association_with_transcript=-6bp_to_ENST00000314744,NM_006161,uc003lax.2_5end | ||
|cluster_id=chr5:134871645..134871660,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_1_at_NEUROG1_5end | |description=CAGE_peak_1_at_NEUROG1_5end | ||
|id=chr5:134871645..134871660,- | |id=chr5:134871645..134871660,- | ||
|ontology_enrichment_celltype=CL:0002319!1.87e-23!25;CL:0002322!1.27e-20!5;CL:0000047!1.38e-18!8;CL:0000133!4.61e-18!59;CL:0000221!2.18e-14!71;CL:0002605!4.71e-13!3;CL:0000540!1.59e-11!6;CL:0000031!1.59e-11!6;CL:0000404!1.59e-11!6;CL:0000095!6.63e-10!17;CL:0000123!6.63e-10!17;CL:0000333!1.25e-09!41;CL:0000128!1.70e-09!7;CL:0000126!1.70e-09!7;CL:0000127!1.70e-09!7;CL:0002453!1.70e-09!7;CL:0000243!2.23e-08!15;CL:0000125!2.23e-08!15;CL:0000030!2.23e-08!15;CL:0000339!2.23e-08!15;CL:0000148!5.20e-07!10;CL:0000541!5.20e-07!10 | |ontology_enrichment_celltype=CL:0002319!1.87e-23!25;CL:0002322!1.27e-20!5;CL:0000047!1.38e-18!8;CL:0000133!4.61e-18!59;CL:0000221!2.18e-14!71;CL:0002605!4.71e-13!3;CL:0000540!1.59e-11!6;CL:0000031!1.59e-11!6;CL:0000404!1.59e-11!6;CL:0000095!6.63e-10!17;CL:0000123!6.63e-10!17;CL:0000333!1.25e-09!41;CL:0000128!1.70e-09!7;CL:0000126!1.70e-09!7;CL:0000127!1.70e-09!7;CL:0002453!1.70e-09!7;CL:0000243!2.23e-08!15;CL:0000125!2.23e-08!15;CL:0000030!2.23e-08!15;CL:0000339!2.23e-08!15;CL:0000148!5.20e-07!10;CL:0000541!5.20e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.48e-14;25!CL:0000540;3.37e-08;6!CL:0000404;3.37e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.48e-14,25;CL:0000047,8.60e-13,8;CL:0000133,1.22e-10,59;CL:0000221,1.30e-08,72;CL:0000540,3.37e-08,6;CL:0000031,3.37e-08,6;CL:0000404,3.37e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.14e-15;3!CL:0000031;3.37e-08;6 | |||
|ontology_enrichment_disease=DOID:5409!7.94e-10!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.07e-18!86;UBERON:0001017!3.33e-17!82;UBERON:0000073!7.46e-16!94;UBERON:0001016!7.46e-16!94;UBERON:0001905!3.36e-10!2;UBERON:0002757!3.36e-10!2;UBERON:0010134!3.36e-10!2;UBERON:0002784!3.36e-10!2;UBERON:0005408!3.36e-10!2;UBERON:0001899!3.36e-10!2;UBERON:0000924!5.80e-10!173;UBERON:0006601!5.80e-10!173;UBERON:0002346!2.07e-09!90;UBERON:0004121!2.27e-09!169;UBERON:0003056!7.63e-09!61;UBERON:0003075!8.96e-09!86;UBERON:0007284!8.96e-09!86;UBERON:0000955!1.32e-08!69;UBERON:0006238!1.32e-08!69;UBERON:0002780!2.76e-08!41;UBERON:0001890!2.76e-08!41;UBERON:0006240!2.76e-08!41;UBERON:0000473!2.82e-08!8;UBERON:0002020!4.19e-08!34;UBERON:0003528!4.19e-08!34;UBERON:0003080!4.76e-08!42;UBERON:0001049!6.21e-08!57;UBERON:0005068!6.21e-08!57;UBERON:0006241!6.21e-08!57;UBERON:0007135!6.21e-08!57;UBERON:0002616!1.37e-07!59;UBERON:0000956!4.46e-07!25;UBERON:0000203!4.46e-07!25 | |ontology_enrichment_uberon=UBERON:0005743!5.07e-18!86;UBERON:0001017!3.33e-17!82;UBERON:0000073!7.46e-16!94;UBERON:0001016!7.46e-16!94;UBERON:0001905!3.36e-10!2;UBERON:0002757!3.36e-10!2;UBERON:0010134!3.36e-10!2;UBERON:0002784!3.36e-10!2;UBERON:0005408!3.36e-10!2;UBERON:0001899!3.36e-10!2;UBERON:0000924!5.80e-10!173;UBERON:0006601!5.80e-10!173;UBERON:0002346!2.07e-09!90;UBERON:0004121!2.27e-09!169;UBERON:0003056!7.63e-09!61;UBERON:0003075!8.96e-09!86;UBERON:0007284!8.96e-09!86;UBERON:0000955!1.32e-08!69;UBERON:0006238!1.32e-08!69;UBERON:0002780!2.76e-08!41;UBERON:0001890!2.76e-08!41;UBERON:0006240!2.76e-08!41;UBERON:0000473!2.82e-08!8;UBERON:0002020!4.19e-08!34;UBERON:0003528!4.19e-08!34;UBERON:0003080!4.76e-08!42;UBERON:0001049!6.21e-08!57;UBERON:0005068!6.21e-08!57;UBERON:0006241!6.21e-08!57;UBERON:0007135!6.21e-08!57;UBERON:0002616!1.37e-07!59;UBERON:0000956!4.46e-07!25;UBERON:0000203!4.46e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.15e-24;2!UBERON:0002757;7.15e-24;2!UBERON:0010134;7.15e-24;2!UBERON:0005408;7.15e-24;2!UBERON:0001899;7.15e-24;2!UBERON:0003296;1.97e-12;4!UBERON:0010133;1.97e-12;4!UBERON:0002784;1.97e-12;4!UBERON:0000966;8.88e-10;5!UBERON:0005388;8.88e-10;5!UBERON:0001802;8.88e-10;5!UBERON:0000922;1.69e-07;49!UBERON:0001894;1.78e-07;7!UBERON:0000956;4.47e-07;25!UBERON:0000203;4.47e-07;25!UBERON:0002780;5.73e-07;41!UBERON:0001890;5.73e-07;41!UBERON:0002360;7.40e-07;2!UBERON:0000094;7.40e-07;2!UBERON:0010743;7.40e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.15e-24,2;UBERON:0002757,7.15e-24,2;UBERON:0010134,7.15e-24,2;UBERON:0005408,7.15e-24,2;UBERON:0001899,7.15e-24,2;UBERON:0001017,1.29e-17,81;UBERON:0001016,9.94e-16,89;UBERON:0003296,1.97e-12,4;UBERON:0010133,1.97e-12,4;UBERON:0002784,1.97e-12,4;UBERON:0003056,1.23e-10,61;UBERON:0000955,2.12e-09,68;UBERON:0006238,2.12e-09,68;UBERON:0002780,2.94e-09,41;UBERON:0001890,2.94e-09,41;UBERON:0003080,2.94e-09,41;UBERON:0006240,2.94e-09,41;UBERON:0004121,6.37e-09,171;UBERON:0000924,6.37e-09,171;UBERON:0006601,6.37e-09,171;UBERON:0000966,2.81e-08,6;UBERON:0005388,2.81e-08,6;UBERON:0001802,2.81e-08,6;UBERON:0003075,1.03e-07,82;UBERON:0007284,1.03e-07,82;UBERON:0011216,1.29e-07,223;UBERON:0001894,1.78e-07,7;UBERON:0006222,1.78e-07,7;UBERON:0002346,2.57e-07,86;UBERON:0000073,4.16e-07,53;UBERON:0002616,4.16e-07,53;UBERON:0000956,4.47e-07,25;UBERON:0000203,4.47e-07,25;UBERON:0002360,7.61e-07,2;UBERON:0000094,7.61e-07,2;UBERON:0010743,7.61e-07,2 | |||
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| ||
|short_description=p1@NEUROG1 | |short_description=p1@NEUROG1 | ||
}} | }} |
Latest revision as of 18:31, 24 September 2015
Short description: | p1@NEUROG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NEUROG1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -6bp_to_ENST00000314744, NM_006161, uc003lax.2_5end |
EntrezGene: | NEUROG1 |
HGNC: | 7764 |
UniProt: | Q92886F1T0H3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.48e-14 | 25 |
neuronal stem cell | 8.60e-13 | 8 |
neurectodermal cell | 1.22e-10 | 59 |
ectodermal cell | 1.30e-08 | 72 |
neuron | 3.37e-08 | 6 |
neuroblast | 3.37e-08 | 6 |
electrically signaling cell | 3.37e-08 | 6 |