FFCP PHASE1:Hg19::chr17:41623009..41623053,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2118 | |EntrezGene=2118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3493 | |HGNC=3493 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z5F4 | |UniProt=B7Z5F4 | ||
|association_with_transcript=27bp_to_ENST00000545089,uc010wih.1_5end | |association_with_transcript=27bp_to_ENST00000545089,uc010wih.1_5end | ||
|cluster_id=chr17:41623009..41623053,- | |||
|coexpression_cluster_id=C3634 | |||
|description=CAGE_peak_4_at_ETV4_5end | |description=CAGE_peak_4_at_ETV4_5end | ||
|id=chr17:41623009..41623053,- | |id=chr17:41623009..41623053,- | ||
|ontology_enrichment_celltype=CL:0000066!2.84e-29!254;CL:0002321!1.60e-27!248;CL:0000220!1.68e-26!246;CL:0000548!3.99e-19!679;CL:0000004!3.99e-19!679;CL:0000255!3.99e-19!679;CL:0000012!2.85e-18!682;CL:0000222!1.27e-12!119;CL:0000055!6.15e-12!180;CL:0000003!1.86e-09!722;CL:0000144!3.01e-09!625;CL:0000076!4.24e-09!62;CL:0000183!8.15e-09!59;CL:0000393!1.55e-08!60;CL:0000211!1.55e-08!60;CL:0000187!7.62e-08!54;CL:0000680!9.10e-08!57;CL:0000056!9.10e-08!57;CL:0000355!9.10e-08!57;CL:0000223!1.79e-07!59;CL:0002371!4.14e-07!591;CL:0002078!8.62e-07!44 | |ontology_enrichment_celltype=CL:0000066!2.84e-29!254;CL:0002321!1.60e-27!248;CL:0000220!1.68e-26!246;CL:0000548!3.99e-19!679;CL:0000004!3.99e-19!679;CL:0000255!3.99e-19!679;CL:0000012!2.85e-18!682;CL:0000222!1.27e-12!119;CL:0000055!6.15e-12!180;CL:0000003!1.86e-09!722;CL:0000144!3.01e-09!625;CL:0000076!4.24e-09!62;CL:0000183!8.15e-09!59;CL:0000393!1.55e-08!60;CL:0000211!1.55e-08!60;CL:0000187!7.62e-08!54;CL:0000680!9.10e-08!57;CL:0000056!9.10e-08!57;CL:0000355!9.10e-08!57;CL:0000223!1.79e-07!59;CL:0002371!4.14e-07!591;CL:0002078!8.62e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:1000449;2.61e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.87e-25,253;CL:0002321,1.04e-24,250;CL:0000222,2.78e-10,121;CL:0000076,1.11e-08,63;CL:0000223,1.54e-07,58;CL:0002078,1.79e-07,45;CL:1000449,2.75e-07,15;CL:0000393,5.06e-07,61;CL:0000211,5.06e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.75e-09!106;DOID:0050687!3.54e-09!143;DOID:162!1.84e-08!235;DOID:14566!7.49e-08!239 | |ontology_enrichment_disease=DOID:305!1.75e-09!106;DOID:0050687!3.54e-09!143;DOID:162!1.84e-08!235;DOID:14566!7.49e-08!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.11e-08,143;DOID:305,5.60e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0003104!9.23e-18!238;UBERON:0009142!9.23e-18!238;UBERON:0000119!1.98e-17!312;UBERON:0005256!1.25e-16!143;UBERON:0000483!1.95e-16!309;UBERON:0002100!4.33e-16!216;UBERON:0003914!2.97e-15!118;UBERON:0000481!6.27e-15!347;UBERON:0000490!9.41e-15!138;UBERON:0000466!2.61e-11!126;UBERON:0001048!3.37e-11!168;UBERON:0005177!9.71e-11!107;UBERON:0002049!2.51e-10!79;UBERON:0007798!2.51e-10!79;UBERON:0000475!3.07e-10!365;UBERON:0000486!6.18e-10!82;UBERON:0000464!2.62e-09!104;UBERON:0004119!2.88e-09!169;UBERON:0000925!2.88e-09!169;UBERON:0006595!2.88e-09!169;UBERON:0000914!3.31e-09!83;UBERON:0002329!3.31e-09!83;UBERON:0003077!3.31e-09!83;UBERON:0003059!3.31e-09!83;UBERON:0007282!3.31e-09!83;UBERON:0009618!3.31e-09!83;UBERON:0007285!3.31e-09!83;UBERON:0001981!3.81e-09!60;UBERON:0007500!3.81e-09!60;UBERON:0004537!3.81e-09!60;UBERON:0006965!3.81e-09!60;UBERON:0000055!6.90e-09!69;UBERON:0000477!3.43e-08!286;UBERON:0004872!3.62e-08!84;UBERON:0004290!4.53e-08!70;UBERON:0001007!5.21e-08!155;UBERON:0001555!5.21e-08!155;UBERON:0007026!5.21e-08!155;UBERON:0001637!9.30e-08!42;UBERON:0003509!9.30e-08!42;UBERON:0004572!9.30e-08!42;UBERON:0000922!2.18e-07!612;UBERON:0005911!2.95e-07!82;UBERON:0000487!3.24e-07!22;UBERON:0006914!3.99e-07!25;UBERON:0004111!4.00e-07!241;UBERON:0000077!4.41e-07!130;UBERON:0000058!8.10e-07!26;UBERON:0006554!9.95e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;1.18e-07;22!UBERON:0003914;1.52e-07;74!UBERON:0006555;2.61e-07;15!UBERON:0004819;2.61e-07;15!UBERON:0001285;2.61e-07;15!UBERON:0007684;2.61e-07;15!UBERON:0001851;4.73e-07;15!UBERON:0000490;4.93e-07;33!UBERON:0006914;5.62e-07;25!UBERON:0000025;7.19e-07;93 | |||
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|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,5.40614660303319,6.97801167972428,4.58726881473362,3.16520373874144,0.495065411840187,0.662794751455832,3.36162573225888,2.41077811209591,6.57279081348636,3.90346239032406,4.67860020691794,3.67201244239655,1.25381888591235,1.43117993565528,2.73748850145768,1.38096903554283,1.68109492645493,1.88831355734875,1.41679406364623,0,0,0,2.75826367343678,7.228942050678,10.7228662948368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.66221330396589,0.361439152384566,1.00267582127178,0,0,0,1.60709189178915,1.99556457716308,2.63504357079378,0,15.6646973965793,11.8651021691017,0,0,0,0,0,0,4.77029777680092,4.30117297553062,4.85996702250632,3.39184765154406,4.61449379830897,6.32771496462155,5.43386912995707,1.55050055501597,0,0.66944122552934,0.805658634218294,3.04108842287405,1.22031028774085,4.77962004449629,3.24056779152704,3.39338967479503,3.36794058939255,5.0675166217495,3.06633274931766,2.84779697870439,5.86245580577303,0,0,2.18047026071267,0,1.64619665163954,0.529636723252875,0.573673241497627,1.41867352879343,1.68203280042692,3.20246987189115,4.19334832309172,1.8672662123986,3.09834545760283,3.59616186849609,5.14615253992767,1.15235184896,19.4486788422051,3.74592092196385,5.70471821544449,5.67904986096844,10.3342358806513,11.4929790501373,10.9551629227754,4.08308342509786,7.37005903870608,3.82305390350332,1.18800285728205,0.989067717114227,15.4727431529464,7.90479955997862,10.4368390651521,11.2606667884768,3.87889761677856,1.75591048352335,0.612975591598039,2.25357088359895,1.81491493056034,0.179389635688862,0.213557388818567,0,0.900273288253207,0.206105058476878,0,0.37223371266318,0.168776332241266,0.194874010322397,0,0.184099797284599,0.161646056818812,0,0.201504196455281,0.339121184620975,4.44499962275583,3.27295344709002,4.30206893083506,15.8565817968474,7.68672656264614,9.06312754382243,8.60386756627575,7.0649838245176,2.91981887260664,0,0.643240938192885,8.28809528114883,0,1.44375896333917,0.118306800039844,0.337169380156203,0.482022059766964,0.661763836394364,0.217879444092406,0.71181185733329,0,0.588664395376038,0.769494313892781,2.95262181849859,8.41450642820675,2.8810180793198,1.47008711385542,0,0,0,0,0.737930631258681,2.91665277507493,7.57276969319516,14.6122279234905,10.6560710756329,10.3699058577553,11.7290989911717,5.19967392639789,2.88662684050547,2.31860809950154,0.587043471179108,0.433099343283221,1.38895653772983,0,0,0,0,0,0,2.81201501960331,1.84780341018745,4.11147782002921,4.29880908973672,4.35950907770943,11.8848630541215,0,0,0,0,0,0.888970520090367,2.29193055334967,2.34434894420094,0,1.33675740514321,0.600686115687835,1.71495859578347,7.51278265113917,5.23152082599936,4.91366515000365,1.16344544182,0,2.535908257668,1.86156681609409,1.04007436911366,4.8869401109807,4.25547396069835,6.39413229638638,0.857867961948885,0,4.11620168390384,2.60588947434988,1.42156779497018,3.95975936466715,1.20575750823834,0.871533458600294,1.89948683245908,0,0,0,0.958499421966331,0,2.85273810081437,0.579125226670317,0.61642896765115,1.96967059563885,0.784596007954691,0,0,0,3.81141936333695,2.60279707715243,0,1.17261385734044,0.637938751653163,0,0,0,0.36807447515742,2.00068208423871,4.88277042659524,0.207970861530807,0,0,0.234282829985426,0.601892199455438,0,1.03473071292505,1.32845119707087,2.58116835958384,3.12781012085098,2.54541504701563,2.40200396667599,0,0,0,0.909382714338778,0,4.23346410661552,0,0,0.280660094433074,0,0,0.482561763430822,4.45254199334973,3.23840356985577,2.13074070375753,2.21743321237285,3.11552657510173,2.78904908303902,3.74664293734029,0.802025881213139,2.76242966807689,1.7222167224691,2.1850940160806,1.18011973463482,7.21919380651859,3.54270550680308,13.3339460760065,5.84556898613043,3.69430701125065,7.96133688496276,6.80374821106063,2.15915916102139,1.54227252690289,4.6060894382455,1.00337954770971,5.3524017339458,5.81753206250107,4.70136984916574,0,0,3.59030175162945,0.984043937099117,1.30151357865721,0.309123034943167,0,0,12.6338418359158,12.3511446746939,1.6068392984416,6.09025525240368,3.23502095940753,3.68408819342711,7.99452120410277,1.6113036730241,2.17525040871343,3.23861184181183,0.712256285173899,2.14870389969272,1.72971060628596,1.27612712494584,1.4162089319777,0.464845549297286,0.31481234683064,3.485186350803,3.38836938193698,4.25844824253617,1.73986598415015,4.81842969670192,1.00187420719394,0.744316738719335,0.316379424718726,0.190630193923825,6.39744478278335,0.42793898803392,7.31867470229655,8.63443504219153,0.899362287916574,0.54907405947211,1.53156123049392,3.23491970517306,0,1.68503382495592,5.36397112998549,1.70599442741899,1.05650146756755,3.95849743083159,1.1312434556297,3.39024349860728,4.41092274836899,1.99031692572366,0.876901770507525,3.47265320560013,2.62357900818653,1.82619339266434,5.5768229657955,3.66204283291914,2.72481569187698,1.5719846562099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| ||
|short_description=p4@ETV4 | |short_description=p4@ETV4 | ||
}} | }} |
Latest revision as of 18:30, 24 September 2015
Short description: | p4@ETV4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ETV4_5end |
Coexpression cluster: | C3634_testicular_Trabecular_osteosarcoma_gastric_Fibroblast_teratocarcinoma_lung |
Association with transcript: | 27bp_to_ENST00000545089, uc010wih.1_5end |
EntrezGene: | ETV4 |
HGNC: | 3493 |
UniProt: | B7Z5F4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.87e-25 | 253 |
embryonic cell | 1.04e-24 | 250 |
mesodermal cell | 2.78e-10 | 121 |
squamous epithelial cell | 1.11e-08 | 63 |
endodermal cell | 1.54e-07 | 58 |
meso-epithelial cell | 1.79e-07 | 45 |
epithelial cell of nephron | 2.75e-07 | 15 |
electrically responsive cell | 5.06e-07 | 61 |
electrically active cell | 5.06e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 7.13e-15 | 117 |
unilaminar epithelium | 1.06e-14 | 148 |
trunk | 1.41e-14 | 199 |
cell layer | 2.41e-14 | 309 |
epithelium | 2.27e-13 | 306 |
trunk region element | 1.30e-11 | 101 |
mesenchyme | 1.53e-11 | 160 |
entire embryonic mesenchyme | 1.53e-11 | 160 |
trunk mesenchyme | 6.54e-11 | 122 |
vasculature | 1.10e-08 | 78 |
vascular system | 1.10e-08 | 78 |
epithelial vesicle | 2.41e-08 | 78 |
multilaminar epithelium | 2.64e-08 | 83 |
epithelial tube open at both ends | 4.10e-08 | 59 |
blood vessel | 4.10e-08 | 59 |
blood vasculature | 4.10e-08 | 59 |
vascular cord | 4.10e-08 | 59 |
simple squamous epithelium | 1.28e-07 | 22 |
vessel | 2.00e-07 | 68 |
nephron epithelium | 2.75e-07 | 15 |
renal tubule | 2.75e-07 | 15 |
nephron tubule | 2.75e-07 | 15 |
nephron | 2.75e-07 | 15 |
uriniferous tubule | 2.75e-07 | 15 |
nephrogenic mesenchyme | 2.75e-07 | 15 |
primordium | 2.80e-07 | 160 |
artery | 3.33e-07 | 42 |
arterial blood vessel | 3.33e-07 | 42 |
arterial system | 3.33e-07 | 42 |
cortex | 4.85e-07 | 15 |
splanchnic layer of lateral plate mesoderm | 5.41e-07 | 83 |
squamous epithelium | 6.14e-07 | 25 |
endo-epithelium | 7.04e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.11e-08 | 143 |
carcinoma | 5.60e-08 | 106 |