FFCP PHASE1:Hg19::chr2:219610798..219610810,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:219610798..219610810,+
|short_description=p17@TTLL4
|description=CAGE_peak_17_at_TTLL4_5end
|association_with_transcript=-8bp_to_ENST00000480472_5end
|Ent...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9654 | |EntrezGene=9654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28976 | |HGNC=28976 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000480472_5end | |||
|cluster_id=chr2:219610798..219610810,+ | |||
|description=CAGE_peak_17_at_TTLL4_5end | |||
|id=chr2:219610798..219610810,+ | |||
|ontology_enrichment_celltype=CL:0002586!5.14e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002586;1.80e-38;3!CL:0000149;3.65e-29;4!CL:0000147;4.38e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.49e-38,3;CL:0000149,3.16e-29,4;CL:0000147,4.21e-09,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.35e-38;3!UBERON:0005425;2.73e-29;1!UBERON:0009117;2.98e-12;10!UBERON:0005564;2.98e-12;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.95e-34!57;UBERON:0005068!1.95e-34!57;UBERON:0006241!1.95e-34!57;UBERON:0007135!1.95e-34!57;UBERON:0002616!4.30e-33!59;UBERON:0000955!1.91e-32!69;UBERON:0006238!1.91e-32!69;UBERON:0005743!1.93e-32!86;UBERON:0000073!3.24e-31!94;UBERON:0001016!3.24e-31!94;UBERON:0003075!2.64e-30!86;UBERON:0007284!2.64e-30!86;UBERON:0002780!6.11e-30!41;UBERON:0001890!6.11e-30!41;UBERON:0006240!6.11e-30!41;UBERON:0003056!2.93e-29!61;UBERON:0003080!3.88e-29!42;UBERON:0001893!4.59e-29!34;UBERON:0002346!1.12e-28!90;UBERON:0002791!1.49e-26!33;UBERON:0001017!1.89e-26!82;UBERON:0002020!7.92e-26!34;UBERON:0003528!7.92e-26!34;UBERON:0007023!3.03e-25!115;UBERON:0001869!8.45e-24!32;UBERON:0000033!1.59e-22!123;UBERON:0000153!3.61e-21!129;UBERON:0007811!3.61e-21!129;UBERON:0002298!1.38e-18!8;UBERON:0004121!1.56e-18!169;UBERON:0000924!6.14e-18!173;UBERON:0006601!6.14e-18!173;UBERON:0000200!1.20e-16!6;UBERON:0000956!1.25e-16!25;UBERON:0000203!1.25e-16!25;UBERON:0002619!1.11e-15!22;UBERON:0001950!6.84e-14!20;UBERON:0001896!2.86e-13!3;UBERON:0005290!2.86e-13!3;UBERON:0010096!2.86e-13!3;UBERON:0004732!2.81e-11!13;UBERON:0002308!4.26e-11!9;UBERON:0000125!4.26e-11!9;UBERON:0000025!9.95e-10!194;UBERON:0001870!1.73e-09!2;UBERON:0005162!1.97e-09!2;UBERON:0000122!1.97e-09!2;UBERON:0009663!2.33e-09!7;UBERON:0001897!3.25e-09!2;UBERON:0000966!8.42e-09!5;UBERON:0005388!8.42e-09!5;UBERON:0001802!8.42e-09!5;UBERON:0004733!1.34e-08!12;UBERON:0002028!1.34e-08!12;UBERON:0007277!1.34e-08!12;UBERON:0000064!3.71e-08!219;UBERON:0002420!2.70e-07!9;UBERON:0007245!2.70e-07!9;UBERON:0010009!2.70e-07!9;UBERON:0010011!2.70e-07!9;UBERON:0000454!2.70e-07!9;UBERON:0002104!4.65e-07!21;UBERON:0001781!5.14e-07!3;UBERON:0001782!5.14e-07!3;UBERON:0005424!5.14e-07!3;UBERON:0000483!6.51e-07!309;UBERON:0003076!8.18e-07!15;UBERON:0003057!8.18e-07!15;UBERON:0000119!8.86e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.93e-51;5!UBERON:0005388;1.93e-51;5!UBERON:0001802;1.93e-51;5!UBERON:0001781;1.80e-38;3!UBERON:0001782;1.80e-38;3!UBERON:0002104;6.18e-34;21!UBERON:0001032;9.15e-30;24!UBERON:0004456;9.15e-30;24!UBERON:0000941;2.73e-29;1!UBERON:0001785;2.73e-29;1!UBERON:0002464;2.73e-29;1!UBERON:0004904;2.73e-29;1!UBERON:0001021;2.73e-29;1!UBERON:0000970;3.43e-23;20!UBERON:0000020;3.00e-20;23!UBERON:0003714;2.21e-15;2!UBERON:0005162;2.21e-15;2!UBERON:0000122;2.21e-15;2!UBERON:0000473;4.69e-15;8!UBERON:0000019;3.46e-14;19!UBERON:0000047;3.46e-14;19!UBERON:0004088;3.46e-14;19!UBERON:0010230;3.46e-14;19!UBERON:0001456;6.58e-13;21!UBERON:0007625;2.68e-11;11!UBERON:0003135;3.13e-11;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,2.63e-75,6;UBERON:0005388,2.63e-75,6;UBERON:0001802,2.63e-75,6;UBERON:0001781,1.18e-63,4;UBERON:0001782,1.49e-38,3;UBERON:0005424,1.49e-38,3;UBERON:0000970,5.77e-34,21;UBERON:0002104,5.77e-34,21;UBERON:0000020,8.62e-30,24;UBERON:0001032,8.62e-30,24;UBERON:0004456,8.62e-30,24;UBERON:0000941,3.16e-29,1;UBERON:0001785,3.16e-29,1;UBERON:0002464,3.16e-29,1;UBERON:0004904,3.16e-29,1;UBERON:0001021,3.16e-29,1;UBERON:0003902,3.16e-29,1;UBERON:0005425,3.16e-29,1;UBERON:0000019,3.96e-23,20;UBERON:0000047,3.96e-23,20;UBERON:0010312,3.96e-23,20;UBERON:0004088,3.96e-23,20;UBERON:0010230,3.96e-23,20;UBERON:0003072,3.96e-23,20;UBERON:0004128,3.96e-23,20;UBERON:0003071,3.96e-23,20;UBERON:0001456,4.38e-21,22;UBERON:0003714,2.37e-15,2;UBERON:0005162,2.37e-15,2;UBERON:0000122,2.37e-15,2;UBERON:0005085,3.88e-15,31;UBERON:0000473,5.04e-15,8;UBERON:0007625,2.55e-11,11;UBERON:0003135,3.30e-11,11;UBERON:0001444,9.18e-10,49;UBERON:0000033,1.34e-08,56;UBERON:0000153,8.30e-08,62;UBERON:0007811,8.30e-08,62;UBERON:0003056,8.30e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82095137628028,0,1.95227036798582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93774963014692,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.412079291905832,0.202210631562555,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0.573409195690071,0.110929051536852,0.869349641179368,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.138314504928436,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.317079050969534,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.40781839786099,0.197318320688547,0,0,0,0,0,0,0,0,3.07349139959622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,1.43979526614655,1.07185652062471,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82095137628028,0,1.95227036798582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93774963014692,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.412079291905832,0.202210631562555,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0.573409195690071,0.110929051536852,0.869349641179368,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.138314504928436,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.317079050969534,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.40781839786099,0.197318320688547,0,0,0,0,0,0,0,0,3.07349139959622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,1.43979526614655,1.07185652062471,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p17@TTLL4 | |||
}} | }} |
Latest revision as of 18:27, 24 September 2015
Short description: | p17@TTLL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_TTLL4_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000480472_5end |
EntrezGene: | TTLL4 |
HGNC: | 28976 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.49e-38 | 3 |
visual pigment cell | 3.16e-29 | 4 |
pigment cell | 4.21e-09 | 14 |