FFCP PHASE1:Hg19::chrX:23926004..23926072,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79135 | |EntrezGene=79135 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28727 | |HGNC=28727 | ||
|TSSclassifier=strong | |||
|UniProt=C9J574,Q9BUR5,G3V1B6 | |UniProt=C9J574,Q9BUR5,G3V1B6 | ||
|association_with_transcript=0bp_to_ENST00000379220,ENST00000379226,ENST00000490078,NM_024122,NR_026545,uc004dax.2,uc004day.3_5end | |association_with_transcript=0bp_to_ENST00000379220,ENST00000379226,ENST00000490078,NM_024122,NR_026545,uc004dax.2,uc004day.3_5end | ||
|cluster_id=chrX:23926004..23926072,- | |||
|description=CAGE_peak_1_at_APOO_5end | |description=CAGE_peak_1_at_APOO_5end | ||
|id=chrX:23926004..23926072,- | |id=chrX:23926004..23926072,- | ||
|ontology_enrichment_celltype=CL:0000066!1.35e-19!254 | |ontology_enrichment_celltype=CL:0000066!1.35e-19!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.36e-20,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.20e-09;29 | |||
|ontology_enrichment_disease=DOID:305!8.79e-21!106;DOID:162!8.96e-20!235;DOID:14566!2.26e-19!239;DOID:0050687!5.33e-18!143;DOID:0050686!2.00e-08!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.79e-21,106;DOID:162,8.82e-20,235;DOID:14566,2.23e-19,239;DOID:0050687,5.28e-18,143;DOID:0050686,1.99e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.54e-14!82;UBERON:0005743!5.37e-14!86;UBERON:0000073!6.73e-12!94;UBERON:0001016!6.73e-12!94;UBERON:0004121!1.04e-11!169;UBERON:0001049!1.68e-11!57;UBERON:0005068!1.68e-11!57;UBERON:0006241!1.68e-11!57;UBERON:0007135!1.68e-11!57;UBERON:0000924!1.85e-11!173;UBERON:0006601!1.85e-11!173;UBERON:0000955!1.99e-11!69;UBERON:0006238!1.99e-11!69;UBERON:0003075!5.44e-11!86;UBERON:0007284!5.44e-11!86;UBERON:0002346!1.57e-10!90;UBERON:0000064!2.27e-10!219;UBERON:0002780!2.40e-10!41;UBERON:0001890!2.40e-10!41;UBERON:0006240!2.40e-10!41;UBERON:0008947!7.72e-10!38;UBERON:0003258!7.72e-10!38;UBERON:0003080!8.78e-10!42;UBERON:0002616!1.01e-09!59;UBERON:0000033!4.78e-09!123;UBERON:0000481!7.29e-09!347;UBERON:0003056!7.48e-09!61;UBERON:0000153!1.10e-08!129;UBERON:0007811!1.10e-08!129;UBERON:0001869!1.37e-08!32;UBERON:0002020!1.87e-08!34;UBERON:0003528!1.87e-08!34;UBERON:0001893!3.39e-08!34;UBERON:0000119!3.87e-08!312;UBERON:0000072!5.84e-08!46;UBERON:0000483!6.89e-08!309;UBERON:0002791!6.89e-08!33;UBERON:0000956!7.48e-08!25;UBERON:0000203!7.48e-08!25;UBERON:0002619!1.85e-07!22;UBERON:0001737!2.74e-07!9;UBERON:0001950!3.74e-07!20;UBERON:0000025!8.77e-07!194 | |ontology_enrichment_uberon=UBERON:0001017!1.54e-14!82;UBERON:0005743!5.37e-14!86;UBERON:0000073!6.73e-12!94;UBERON:0001016!6.73e-12!94;UBERON:0004121!1.04e-11!169;UBERON:0001049!1.68e-11!57;UBERON:0005068!1.68e-11!57;UBERON:0006241!1.68e-11!57;UBERON:0007135!1.68e-11!57;UBERON:0000924!1.85e-11!173;UBERON:0006601!1.85e-11!173;UBERON:0000955!1.99e-11!69;UBERON:0006238!1.99e-11!69;UBERON:0003075!5.44e-11!86;UBERON:0007284!5.44e-11!86;UBERON:0002346!1.57e-10!90;UBERON:0000064!2.27e-10!219;UBERON:0002780!2.40e-10!41;UBERON:0001890!2.40e-10!41;UBERON:0006240!2.40e-10!41;UBERON:0008947!7.72e-10!38;UBERON:0003258!7.72e-10!38;UBERON:0003080!8.78e-10!42;UBERON:0002616!1.01e-09!59;UBERON:0000033!4.78e-09!123;UBERON:0000481!7.29e-09!347;UBERON:0003056!7.48e-09!61;UBERON:0000153!1.10e-08!129;UBERON:0007811!1.10e-08!129;UBERON:0001869!1.37e-08!32;UBERON:0002020!1.87e-08!34;UBERON:0003528!1.87e-08!34;UBERON:0001893!3.39e-08!34;UBERON:0000119!3.87e-08!312;UBERON:0000072!5.84e-08!46;UBERON:0000483!6.89e-08!309;UBERON:0002791!6.89e-08!33;UBERON:0000956!7.48e-08!25;UBERON:0000203!7.48e-08!25;UBERON:0002619!1.85e-07!22;UBERON:0001737!2.74e-07!9;UBERON:0001950!3.74e-07!20;UBERON:0000025!8.77e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0000072;2.20e-08;37!UBERON:0001869;5.95e-08;32!UBERON:0000956;8.25e-08;25!UBERON:0000203;8.25e-08;25!UBERON:0003528;1.47e-07;34!UBERON:0002020;1.47e-07;34!UBERON:0002791;1.58e-07;32!UBERON:0002780;1.61e-07;41!UBERON:0001890;1.61e-07;41!UBERON:0002619;2.21e-07;22!UBERON:0001737;2.52e-07;9!UBERON:0001557;2.52e-07;9!UBERON:0001893;3.34e-07;34!UBERON:0001950;4.61e-07;20!UBERON:0000073;5.36e-07;53!UBERON:0002616;5.36e-07;53!UBERON:0000955;8.06e-07;68 | |||
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| ||
|short_description=p1@APOO | |short_description=p1@APOO | ||
}} | }} |
Latest revision as of 18:13, 24 September 2015
Short description: | p1@APOO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APOO_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000379220, ENST00000379226, ENST00000490078, NM_024122, NR_026545, uc004dax.2, uc004day.3_5end |
EntrezGene: | APOO |
HGNC: | 28727 |
UniProt: | C9J574Q9BUR5G3V1B6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.36e-20 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.79e-21 | 106 |
cancer | 8.82e-20 | 235 |
disease of cellular proliferation | 2.23e-19 | 239 |
cell type cancer | 5.28e-18 | 143 |
organ system cancer | 1.99e-08 | 137 |