FFCP PHASE1:Hg19::chr6:131521120..131521152,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9465 | |EntrezGene=9465 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=377 | |HGNC=377 | ||
|TSSclassifier=strong | |||
|UniProt=F5H4P9 | |UniProt=F5H4P9 | ||
|association_with_transcript=0bp_to_ENST00000537868_5end | |association_with_transcript=0bp_to_ENST00000537868_5end | ||
|cluster_id=chr6:131521120..131521152,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_3_at_AKAP7_5end | |description=CAGE_peak_3_at_AKAP7_5end | ||
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|ontology_enrichment_celltype=CL:0000542!4.97e-36!53;CL:0000051!4.97e-36!53;CL:0000838!2.99e-35!52;CL:0000084!1.63e-25!25;CL:0000827!1.63e-25!25;CL:0000791!3.44e-24!18;CL:0000789!3.44e-24!18;CL:0002420!3.44e-24!18;CL:0002419!3.44e-24!18;CL:0000790!3.44e-24!18;CL:0000037!1.80e-23!172;CL:0000566!1.80e-23!172;CL:0000988!6.88e-21!182;CL:0000738!8.71e-21!140;CL:0002032!1.50e-20!165;CL:0000837!1.50e-20!165;CL:0002087!7.53e-18!119;CL:0000625!8.00e-16!11;CL:0000236!2.50e-15!14;CL:0002031!3.72e-15!124;CL:0000945!1.91e-09!24;CL:0000826!1.91e-09!24;CL:0000624!4.59e-09!6 | |ontology_enrichment_celltype=CL:0000542!4.97e-36!53;CL:0000051!4.97e-36!53;CL:0000838!2.99e-35!52;CL:0000084!1.63e-25!25;CL:0000827!1.63e-25!25;CL:0000791!3.44e-24!18;CL:0000789!3.44e-24!18;CL:0002420!3.44e-24!18;CL:0002419!3.44e-24!18;CL:0000790!3.44e-24!18;CL:0000037!1.80e-23!172;CL:0000566!1.80e-23!172;CL:0000988!6.88e-21!182;CL:0000738!8.71e-21!140;CL:0002032!1.50e-20!165;CL:0000837!1.50e-20!165;CL:0002087!7.53e-18!119;CL:0000625!8.00e-16!11;CL:0000236!2.50e-15!14;CL:0002031!3.72e-15!124;CL:0000945!1.91e-09!24;CL:0000826!1.91e-09!24;CL:0000624!4.59e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.04e-39;18!CL:0000789;5.04e-39;18!CL:0002419;5.04e-39;18!CL:0000084;1.18e-32;25!CL:0000625;3.99e-25;11!CL:0000542;7.60e-24;53!CL:0000236;1.17e-17;13!CL:0000624;5.24e-14;6!CL:0000945;1.98e-08;24!CL:0000898;3.42e-08;3!CL:0002087;2.16e-07;104!CL:0000226;2.57e-07;3!CL:0000842;2.57e-07;3!CL:0000623;2.96e-07;3 | |ontology_enrichment_celltype_v019=CL:0000791;5.04e-39;18!CL:0000789;5.04e-39;18!CL:0002419;5.04e-39;18!CL:0000084;1.18e-32;25!CL:0000625;3.99e-25;11!CL:0000542;7.60e-24;53!CL:0000236;1.17e-17;13!CL:0000624;5.24e-14;6!CL:0000945;1.98e-08;24!CL:0000898;3.42e-08;3!CL:0002087;2.16e-07;104!CL:0000226;2.57e-07;3!CL:0000842;2.57e-07;3!CL:0000623;2.96e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.76e-41,52;CL:0000542,4.47e-40,53;CL:0000051,4.47e-40,53;CL:0000791,4.83e-39,18;CL:0000789,4.83e-39,18;CL:0002420,4.83e-39,18;CL:0002419,4.83e-39,18;CL:0000790,4.83e-39,18;CL:0000084,1.07e-32,25;CL:0000827,1.07e-32,25;CL:0000625,3.78e-25,11;CL:0000037,7.50e-21,168;CL:0002087,8.94e-21,115;CL:0000738,2.76e-20,136;CL:0000988,4.30e-19,177;CL:0002032,5.98e-17,161;CL:0000837,5.98e-17,161;CL:0000236,3.86e-16,14;CL:0002031,6.71e-16,120;CL:0000624,5.81e-14,6;CL:0000945,2.17e-08,24;CL:0000826,2.17e-08,24;CL:0000898,3.51e-08,3;CL:0000226,2.57e-07,3;CL:0000842,2.57e-07,3;CL:0000623,2.93e-07,3;CL:0000825,2.93e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.04e-39;18!CL:0000051;7.60e-24;53 | |ontology_enrichment_development_v019=CL:0000790;5.04e-39;18!CL:0000051;7.60e-24;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.04e-11!15;UBERON:0000179!2.04e-11!15;UBERON:0000463!2.04e-11!15;UBERON:0007023!4.25e-10!115;UBERON:0004177!6.92e-07!7 | |ontology_enrichment_uberon=UBERON:0000178!2.04e-11!15;UBERON:0000179!2.04e-11!15;UBERON:0000463!2.04e-11!15;UBERON:0007023!4.25e-10!115;UBERON:0004177!6.92e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.03e-18;15!UBERON:0000179;1.03e-18;15!UBERON:0000463;1.03e-18;15!UBERON:0002390;5.20e-14;32!UBERON:0002193;1.75e-09;42!UBERON:0004177;3.88e-07;5!UBERON:0005057;3.88e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.03e-18;15!UBERON:0000179;1.03e-18;15!UBERON:0000463;1.03e-18;15!UBERON:0002390;5.20e-14;32!UBERON:0002193;1.75e-09;42!UBERON:0004177;3.88e-07;5!UBERON:0005057;3.88e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.06e-18,15;UBERON:0000179,1.06e-18,15;UBERON:0000463,1.06e-18,15;UBERON:0004177,1.12e-10,7;UBERON:0005057,1.12e-10,7;UBERON:0002370,1.61e-09,4;UBERON:0005058,1.61e-09,4;UBERON:0009113,1.61e-09,4;UBERON:0003295,1.61e-09,4;UBERON:0005562,1.61e-09,4 | |||
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|short_description=p3@AKAP7 | |short_description=p3@AKAP7 | ||
}} | }} |
Latest revision as of 18:11, 24 September 2015
Short description: | p3@AKAP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AKAP7_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000537868_5end |
EntrezGene: | AKAP7 |
HGNC: | 377 |
UniProt: | F5H4P9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.76e-41 | 52 |
lymphocyte | 4.47e-40 | 53 |
common lymphoid progenitor | 4.47e-40 | 53 |
mature alpha-beta T cell | 4.83e-39 | 18 |
alpha-beta T cell | 4.83e-39 | 18 |
immature T cell | 4.83e-39 | 18 |
mature T cell | 4.83e-39 | 18 |
immature alpha-beta T cell | 4.83e-39 | 18 |
T cell | 1.07e-32 | 25 |
pro-T cell | 1.07e-32 | 25 |
CD8-positive, alpha-beta T cell | 3.78e-25 | 11 |
hematopoietic stem cell | 7.50e-21 | 168 |
nongranular leukocyte | 8.94e-21 | 115 |
leukocyte | 2.76e-20 | 136 |
hematopoietic cell | 4.30e-19 | 177 |
hematopoietic oligopotent progenitor cell | 5.98e-17 | 161 |
hematopoietic multipotent progenitor cell | 5.98e-17 | 161 |
B cell | 3.86e-16 | 14 |
hematopoietic lineage restricted progenitor cell | 6.71e-16 | 120 |
CD4-positive, alpha-beta T cell | 5.81e-14 | 6 |
lymphocyte of B lineage | 2.17e-08 | 24 |
pro-B cell | 2.17e-08 | 24 |
naive T cell | 3.51e-08 | 3 |
single nucleate cell | 2.57e-07 | 3 |
mononuclear cell | 2.57e-07 | 3 |
natural killer cell | 2.93e-07 | 3 |
pro-NK cell | 2.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.06e-18 | 15 |
haemolymphatic fluid | 1.06e-18 | 15 |
organism substance | 1.06e-18 | 15 |
hemopoietic organ | 1.12e-10 | 7 |
immune organ | 1.12e-10 | 7 |
thymus | 1.61e-09 | 4 |
hemolymphoid system gland | 1.61e-09 | 4 |
thymic region | 1.61e-09 | 4 |
pharyngeal gland | 1.61e-09 | 4 |
thymus primordium | 1.61e-09 | 4 |