FFCP PHASE1:Hg19::chr19:6710750..6710769,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=718 | |EntrezGene=718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1318 | |HGNC=1318 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=198bp_to_ENST00000466344_5end | |association_with_transcript=198bp_to_ENST00000466344_5end | ||
|cluster_id=chr19:6710750..6710769,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_32_at_C3_5end | |description=CAGE_peak_32_at_C3_5end | ||
|id=chr19:6710750..6710769,- | |id=chr19:6710750..6710769,- | ||
|ontology_enrichment_celltype=CL:0000181!1.59e-09!12;CL:0000417!1.59e-09!12;CL:0000668!1.59e-09!12;CL:0000414!1.59e-09!12;CL:0000412!1.59e-09!12;CL:0000182!1.59e-09!12 | |ontology_enrichment_celltype=CL:0000181!1.59e-09!12;CL:0000417!1.59e-09!12;CL:0000668!1.59e-09!12;CL:0000414!1.59e-09!12;CL:0000412!1.59e-09!12;CL:0000182!1.59e-09!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.62e-13;12!CL:0002593;1.57e-09;2!CL:0000746;7.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.01e-13,12;CL:0002593,2.02e-09,2;CL:0000746,7.28e-07,3;CL:0000513,7.28e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.71e-07;11!CL:0000513;7.08e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.27e-11!115;UBERON:0002107!1.07e-10!19;UBERON:0006925!1.07e-10!19;UBERON:0008836!1.07e-10!19;UBERON:0008835!2.33e-10!22;UBERON:0003894!2.33e-10!22;UBERON:0002368!4.03e-10!35;UBERON:0009854!8.99e-10!23;UBERON:0007499!9.62e-09!25;UBERON:0009497!9.62e-09!25;UBERON:0000015!9.62e-09!25;UBERON:0002423!9.62e-09!25;UBERON:0006235!9.62e-09!25;UBERON:0004161!9.62e-09!25;UBERON:0002530!2.38e-08!59;UBERON:0009856!2.73e-08!26;UBERON:0000949!4.32e-08!45;UBERON:0004111!1.04e-07!241;UBERON:0003929!2.99e-07!54;UBERON:0005057!4.53e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.67e-22;19!UBERON:0006925;4.67e-22;19!UBERON:0002171;1.03e-17;1!UBERON:0006518;1.03e-17;1!UBERON:0008949;1.03e-17;1!UBERON:0000101;1.03e-17;1!UBERON:0002167;1.03e-17;1!UBERON:0002423;8.49e-17;25!UBERON:0002365;1.54e-13;31!UBERON:0002330;1.54e-13;31!UBERON:0002368;9.69e-12;33!UBERON:0002456;1.57e-09;2!UBERON:0000949;1.35e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.99e-22,19;UBERON:0006925,4.99e-22,19;UBERON:0008836,4.99e-22,19;UBERON:0008835,4.80e-19,22;UBERON:0003894,4.80e-19,22;UBERON:0009854,3.18e-18,23;UBERON:0002171,7.37e-18,1;UBERON:0006518,7.37e-18,1;UBERON:0008949,7.37e-18,1;UBERON:0000101,7.37e-18,1;UBERON:0002167,7.37e-18,1;UBERON:0007499,8.93e-17,25;UBERON:0009497,8.93e-17,25;UBERON:0000015,8.93e-17,25;UBERON:0002423,8.93e-17,25;UBERON:0006235,8.93e-17,25;UBERON:0004161,8.93e-17,25;UBERON:0009856,3.90e-16,26;UBERON:0002365,1.51e-13,31;UBERON:0002330,1.51e-13,31;UBERON:0002368,5.25e-12,35;UBERON:0002456,2.02e-09,2;UBERON:0000949,2.41e-09,45;UBERON:0003929,8.75e-08,54;UBERON:0005172,8.75e-08,54;UBERON:0005173,8.75e-08,54;UBERON:0005911,4.00e-07,82;UBERON:0002530,4.03e-07,59;UBERON:0002417,5.30e-07,60;UBERON:0000916,5.30e-07,60;UBERON:0009569,7.40e-07,112 | |||
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| ||
|short_description=p32@C3 | |short_description=p32@C3 | ||
}} | }} |
Latest revision as of 18:08, 24 September 2015
Short description: | p32@C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_C3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 198bp_to_ENST00000466344_5end |
EntrezGene: | C3 |
HGNC: | 1318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.01e-13 | 12 |
smooth muscle cell of the internal thoracic artery | 2.02e-09 | 2 |
cardiac muscle cell | 7.28e-07 | 3 |
cardiac muscle myoblast | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 4.99e-22 | 19 |
digestive gland | 4.99e-22 | 19 |
liver bud | 4.99e-22 | 19 |
hepatic diverticulum | 4.80e-19 | 22 |
liver primordium | 4.80e-19 | 22 |
digestive tract diverticulum | 3.18e-18 | 23 |
lower lobe of right lung | 7.37e-18 | 1 |
right lung lobe | 7.37e-18 | 1 |
lower lobe of lung | 7.37e-18 | 1 |
lobe of lung | 7.37e-18 | 1 |
right lung | 7.37e-18 | 1 |
epithelial sac | 8.93e-17 | 25 |
epithelium of foregut-midgut junction | 8.93e-17 | 25 |
anatomical boundary | 8.93e-17 | 25 |
hepatobiliary system | 8.93e-17 | 25 |
foregut-midgut junction | 8.93e-17 | 25 |
septum transversum | 8.93e-17 | 25 |
sac | 3.90e-16 | 26 |
exocrine gland | 1.51e-13 | 31 |
exocrine system | 1.51e-13 | 31 |
endocrine gland | 5.25e-12 | 35 |
internal thoracic artery | 2.02e-09 | 2 |
endocrine system | 2.41e-09 | 45 |
gut epithelium | 8.75e-08 | 54 |
abdomen element | 8.75e-08 | 54 |
abdominal segment element | 8.75e-08 | 54 |
endo-epithelium | 4.00e-07 | 82 |
gland | 4.03e-07 | 59 |
abdominal segment of trunk | 5.30e-07 | 60 |
abdomen | 5.30e-07 | 60 |
subdivision of trunk | 7.40e-07 | 112 |