FFCP PHASE1:Hg19::chr19:6710641..6710652,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:6710641..6710652,-
|short_description=p37@C3
|description=CAGE_peak_37_at_C3_5end
|association_with_transcript=315bp_to_ENST00000466344_5end
|EntrezGene=...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=718 | |EntrezGene=718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1318 | |HGNC=1318 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=315bp_to_ENST00000466344_5end | |||
|cluster_id=chr19:6710641..6710652,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_37_at_C3_5end | |||
|id=chr19:6710641..6710652,- | |||
|ontology_enrichment_celltype=CL:0000860!4.56e-10!45;CL:0000453!2.35e-09!5;CL:0002057!1.98e-08!42;CL:0002009!1.26e-07!65;CL:0000557!1.30e-07!71;CL:0002194!6.70e-07!63;CL:0000576!6.70e-07!63;CL:0000040!6.70e-07!63;CL:0000559!6.70e-07!63;CL:0000839!9.42e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000453;3.81e-40;5!CL:0000990;1.08e-22;8!CL:0000451;1.04e-18;10!CL:0001014;1.75e-12;2!CL:0001016;1.75e-12;2!CL:0000182;2.01e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,3.33e-40,5;CL:0000990,1.01e-22,8;CL:0000451,9.78e-19,10;CL:0001014,1.85e-12,2;CL:0001016,1.85e-12,2;CL:0000182,1.97e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;4.59e-23;1!DOID:4549;4.59e-23;1!DOID:5861;4.59e-23;1!DOID:6496;4.59e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.10e-23,1;DOID:4549,4.10e-23,1;DOID:5861,4.10e-23,1;DOID:6496,4.10e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0001474!5.20e-08!86;UBERON:0002405!8.12e-07!115;UBERON:0004765!8.43e-07!101;UBERON:0001434!8.43e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.05e-09;10!UBERON:0002418;1.35e-08;3!UBERON:0004755;1.35e-08;3!UBERON:0000178;9.09e-07;15!UBERON:0000179;9.09e-07;15!UBERON:0000463;9.09e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.15e-09,10;UBERON:0000358,1.15e-09,10;UBERON:0000307,1.15e-09,10;UBERON:0000091,1.15e-09,10;UBERON:0000087,1.15e-09,10;UBERON:0007010,1.15e-09,10;UBERON:0007806,1.15e-09,10;UBERON:0008780,1.15e-09,10;UBERON:0005728,1.15e-09,10;UBERON:0002418,1.30e-08,3;UBERON:0004755,1.30e-08,3;UBERON:0000178,9.64e-07,15;UBERON:0000179,9.64e-07,15;UBERON:0000463,9.64e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0.512321413058201,0.236482229888585,0.689491361473237,0.645484683583826,0,0,0,0.224723484445085,0.612167784741805,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,10.1404027857465,4.91413608338813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0.489698424477443,0.141353071433941,0,0,0,0,1.18608451472249,1.11207545051853,0.835375596043643,0,0,0,0,0,0,0,0,0,0.063186579628488,0.751617097072463,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0.0967563312890851,0,0.0821154570532092,0,1.3238419003725,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0.717873024576814,0,0.429226048136571,0,0,0,0,0.0787831823072236,0.164831716762333,0.337017719270924,0,0,0,0,0,0,0,4.27450393947851,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.830091809617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,3.89720617678777,1.72724292407372,0.817826971279221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.383287282918786,0,0,0,0,0,0.115233987555779,0,0,0,0,0.111231401892069,0,0,0,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02717601618299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0.512321413058201,0.236482229888585,0.689491361473237,0.645484683583826,0,0,0,0.224723484445085,0.612167784741805,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,10.1404027857465,4.91413608338813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0.489698424477443,0.141353071433941,0,0,0,0,1.18608451472249,1.11207545051853,0.835375596043643,0,0,0,0,0,0,0,0,0,0.063186579628488,0.751617097072463,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0.0967563312890851,0,0.0821154570532092,0,1.3238419003725,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0.717873024576814,0,0.429226048136571,0,0,0,0,0.0787831823072236,0.164831716762333,0.337017719270924,0,0,0,0,0,0,0,4.27450393947851,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.830091809617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,3.89720617678777,1.72724292407372,0.817826971279221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.383287282918786,0,0,0,0,0,0.115233987555779,0,0,0,0,0.111231401892069,0,0,0,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02717601618299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p37@C3 | |||
}} | }} |
Latest revision as of 18:07, 24 September 2015
Short description: | p37@C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_37_at_C3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 315bp_to_ENST00000466344_5end |
EntrezGene: | C3 |
HGNC: | 1318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 3.33e-40 | 5 |
conventional dendritic cell | 1.01e-22 | 8 |
dendritic cell | 9.78e-19 | 10 |
CD1a-positive Langerhans cell | 1.85e-12 | 2 |
immature CD1a-positive Langerhans cell | 1.85e-12 | 2 |
hepatocyte | 1.97e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.15e-09 | 10 |
blastocyst | 1.15e-09 | 10 |
blastula | 1.15e-09 | 10 |
bilaminar disc | 1.15e-09 | 10 |
inner cell mass | 1.15e-09 | 10 |
cleaving embryo | 1.15e-09 | 10 |
connecting stalk | 1.15e-09 | 10 |
inner cell mass derived epiblast | 1.15e-09 | 10 |
extraembryonic mesoderm | 1.15e-09 | 10 |
cartilage tissue | 1.30e-08 | 3 |
skeletal tissue | 1.30e-08 | 3 |
blood | 9.64e-07 | 15 |
haemolymphatic fluid | 9.64e-07 | 15 |
organism substance | 9.64e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.10e-23 | 1 |
extraosseous chondrosarcoma | 4.10e-23 | 1 |
myxoid chondrosarcoma | 4.10e-23 | 1 |
extraskeletal myxoid chondrosarcoma | 4.10e-23 | 1 |