FFCP PHASE1:Hg19::chrX:23901811..23901824,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:23901811..23901824,-
|short_description=p5@APOO
|description=CAGE_peak_5_at_APOO_5end
|association_with_transcript=225bp_to_uc004daw.2_5end
|EntrezGene=79...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79135 | |EntrezGene=79135 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=28727 | |HGNC=28727 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=225bp_to_uc004daw.2_5end | |||
|cluster_id=chrX:23901811..23901824,- | |||
|description=CAGE_peak_5_at_APOO_5end | |||
|id=chrX:23901811..23901824,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002619;2.52e-21;3!CL:0000235;1.82e-19;6!CL:0002541;3.12e-10;3!CL:0002379;1.17e-08;1!CL:0000134;1.32e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,3.11e-21,3;CL:0000235,1.95e-19,6;CL:0002541,2.84e-10,3;CL:0002379,1.13e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.33e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;1.17e-08;1!DOID:3565;1.17e-08;1!DOID:3371;4.72e-08;1!DOID:4549;4.72e-08;1!DOID:5861;4.72e-08;1!DOID:6496;4.72e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.13e-08,1;DOID:3565,1.13e-08,1;DOID:3371,6.68e-08,1;DOID:4549,6.68e-08,1;DOID:5861,6.68e-08,1;DOID:6496,6.68e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.97e-22;15!UBERON:0000179;5.97e-22;15!UBERON:0000463;5.97e-22;15!UBERON:0002119;1.06e-15;4!UBERON:0003124;3.12e-10;3!UBERON:0000920;3.12e-10;3!UBERON:0002390;9.18e-10;32!UBERON:0000478;3.92e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.99e-22,15;UBERON:0000179,5.99e-22,15;UBERON:0000463,5.99e-22,15;UBERON:0002119,1.45e-15,4;UBERON:0002390,3.90e-11,98;UBERON:0003061,3.90e-11,98;UBERON:0000920,2.84e-10,3;UBERON:0002193,7.20e-10,108;UBERON:0003124,1.40e-09,7;UBERON:0000478,3.82e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0.738726348460727,0,0,0,0,0,0.534893840235659,0.246301768349837,0.393553906568396,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,2.91090116511902,2.59114932815184,1.03030227053675,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0.327447688744282,0,0,0.649094787309367,0.348259474598534,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0,0,0,0.169560592310488,0,0.545492241181669,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.579652024875384,0,0.144366447761074,0.462985512576611,0,0,0,0.738651018262192,9.36017060556951,2.22946743433092,0.93733833986777,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600686115687835,0,0,0.87192013766656,0.36669142910475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,0.502257091432126,4.21667878966063,2.39624855491583,3.44585807502342,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99267679560631,0,0,0.587403472388222,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0.309123034943167,0.457847324091717,0.330037999682352,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0.384380134730212,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0.229723400206959,1.52234282769651,7.64637207142375,1.13929437434833,1.66762242820452,0.411362273086194,2.59389324477087,3.24018862342869,3.96562588147135,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0.818149460017238,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,3.50901275705111,0.183195186803725,1.5991043280559,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694238953340524,0,0.261177619741208,0,0,0,0,0,0,1.059073520298,0,0,0.19871461170299,0.126621591911757,0,0.0801588202515337,0,0.799238438328521,0,0,0,0,0,0,0,0.104602846312333,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0.0788057072991982,0.0524545881349981,0,1.97216073266129,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0.1251909307065,0.573409195690071,0,0.0620964029413835,0,0,0.454947352624943,0.285465333544967,4.23478475456709,0,0,0.298509605773748,0,0.554805861502613,0,0,0,0,0,0,0,1.43367090447332,0,1.39736661188633,1.24411862352257,0.53168342911599,0,0,0.380805212168795,0,0.363697318405119,0.537052785212442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0.345430341731199,0,0.276516872303462,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0.346576998451015,0,0,0.795664888465099,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0.206686796501184,0.126831620387814,0,0,0,0.351742488719241,0,0,0,0,0,2.66107110487917,0,0.857440047187092,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,1.9110067515482,0,0,0.697448552208751,0,0,0,0,0,0,0,0,0.423387050190929,0,2.17144469965024,0.955538938977433,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.0644578879735772,0.699588091474503,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.630832124175395,0.218531143927391,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0.202056159043763,0.0717222053926763,0,0.488419611665847,0,0,0,0,0.733448665097199,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0.738726348460727,0,0,0,0,0,0.534893840235659,0.246301768349837,0.393553906568396,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,2.91090116511902,2.59114932815184,1.03030227053675,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0.327447688744282,0,0,0.649094787309367,0.348259474598534,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0,0,0,0.169560592310488,0,0.545492241181669,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.579652024875384,0,0.144366447761074,0.462985512576611,0,0,0,0.738651018262192,9.36017060556951,2.22946743433092,0.93733833986777,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600686115687835,0,0,0.87192013766656,0.36669142910475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,0.502257091432126,4.21667878966063,2.39624855491583,3.44585807502342,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99267679560631,0,0,0.587403472388222,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0.309123034943167,0.457847324091717,0.330037999682352,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0.384380134730212,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0.229723400206959,1.52234282769651,7.64637207142375,1.13929437434833,1.66762242820452,0.411362273086194,2.59389324477087,3.24018862342869,3.96562588147135,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0.818149460017238,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,3.50901275705111,0.183195186803725,1.5991043280559,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694238953340524,0,0.261177619741208,0,0,0,0,0,0,1.059073520298,0,0,0.19871461170299,0.126621591911757,0,0.0801588202515337,0,0.799238438328521,0,0,0,0,0,0,0,0.104602846312333,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0.0788057072991982,0.0524545881349981,0,1.97216073266129,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0.1251909307065,0.573409195690071,0,0.0620964029413835,0,0,0.454947352624943,0.285465333544967,4.23478475456709,0,0,0.298509605773748,0,0.554805861502613,0,0,0,0,0,0,0,1.43367090447332,0,1.39736661188633,1.24411862352257,0.53168342911599,0,0,0.380805212168795,0,0.363697318405119,0.537052785212442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0.345430341731199,0,0.276516872303462,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0.346576998451015,0,0,0.795664888465099,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0.206686796501184,0.126831620387814,0,0,0,0.351742488719241,0,0,0,0,0,2.66107110487917,0,0.857440047187092,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,1.9110067515482,0,0,0.697448552208751,0,0,0,0,0,0,0,0,0.423387050190929,0,2.17144469965024,0.955538938977433,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.0644578879735772,0.699588091474503,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.630832124175395,0.218531143927391,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0.202056159043763,0.0717222053926763,0,0.488419611665847,0,0,0,0,0.733448665097199,0,0,0,0 | ||
|short_description=p5@APOO | |||
}} | }} |
Latest revision as of 18:04, 24 September 2015
Short description: | p5@APOO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_APOO_5end |
Coexpression cluster: | NA |
Association with transcript: | 225bp_to_uc004daw.2_5end |
EntrezGene: | APOO |
HGNC: | 28727 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 3.11e-21 | 3 |
macrophage | 1.95e-19 | 6 |
chorionic membrane mesenchymal stem cell | 2.84e-10 | 3 |
meningothelial cell | 1.13e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 5.99e-22 | 15 |
haemolymphatic fluid | 5.99e-22 | 15 |
organism substance | 5.99e-22 | 15 |
left ovary | 1.45e-15 | 4 |
hematopoietic system | 3.90e-11 | 98 |
blood island | 3.90e-11 | 98 |
egg chorion | 2.84e-10 | 3 |
hemolymphoid system | 7.20e-10 | 108 |
chorion | 1.40e-09 | 7 |
extraembryonic structure | 3.82e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.13e-08 | 1 |
meningioma | 1.13e-08 | 1 |
chondrosarcoma | 6.68e-08 | 1 |
extraosseous chondrosarcoma | 6.68e-08 | 1 |
myxoid chondrosarcoma | 6.68e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 6.68e-08 | 1 |