FFCP PHASE1:Hg19::chr19:6697545..6697565,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:6697545..6697565,-
|short_description=p11@C3
|description=CAGE_peak_11_at_C3_5end
|association_with_transcript=160bp_to_ENST00000482703_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=718 | |EntrezGene=718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1318 | |HGNC=1318 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=160bp_to_ENST00000482703_5end | |||
|cluster_id=chr19:6697545..6697565,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_11_at_C3_5end | |||
|id=chr19:6697545..6697565,- | |||
|ontology_enrichment_celltype=CL:0000181!1.54e-08!12;CL:0000417!1.54e-08!12;CL:0000668!1.54e-08!12;CL:0000414!1.54e-08!12;CL:0000412!1.54e-08!12;CL:0000182!1.54e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.82e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.15e-13,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.17e-10;11!UBERON:0009497;2.81e-08;13!UBERON:0010227;1.14e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.69e-21!115;UBERON:0000025!1.13e-12!194;UBERON:0004111!1.63e-11!241;UBERON:0000477!3.12e-11!286;UBERON:0002365!1.55e-10!31;UBERON:0002330!1.55e-10!31;UBERON:0009854!2.78e-10!23;UBERON:0002107!2.85e-10!19;UBERON:0006925!2.85e-10!19;UBERON:0008836!2.85e-10!19;UBERON:0009856!7.99e-10!26;UBERON:0008835!1.63e-09!22;UBERON:0003894!1.63e-09!22;UBERON:0000483!2.28e-09!309;UBERON:0009497!2.61e-09!25;UBERON:0000015!2.61e-09!25;UBERON:0002423!2.61e-09!25;UBERON:0006235!2.61e-09!25;UBERON:0004161!2.61e-09!25;UBERON:0007499!4.33e-09!25;UBERON:0000119!4.48e-09!312;UBERON:0005057!1.97e-08!26;UBERON:0002530!1.84e-07!59;UBERON:0003914!7.27e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.83e-16;19!UBERON:0006925;1.83e-16;19!UBERON:0002423;2.64e-12;25!UBERON:0002365;3.75e-12;31!UBERON:0002330;3.75e-12;31!UBERON:0002368;1.11e-10;33!UBERON:0002171;4.98e-08;1!UBERON:0006518;4.98e-08;1!UBERON:0008949;4.98e-08;1!UBERON:0000101;4.98e-08;1!UBERON:0002167;4.98e-08;1!UBERON:0000949;8.85e-08;43!UBERON:0000029;1.14e-07;1!UBERON:0002079;1.14e-07;1!UBERON:0001301;1.14e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.12e-16,19;UBERON:0006925,2.12e-16,19;UBERON:0008836,2.12e-16,19;UBERON:0008835,4.78e-14,22;UBERON:0003894,4.78e-14,22;UBERON:0009854,2.13e-13,23;UBERON:0002365,1.72e-12,31;UBERON:0002330,1.72e-12,31;UBERON:0007499,2.94e-12,25;UBERON:0009497,2.94e-12,25;UBERON:0000015,2.94e-12,25;UBERON:0002423,2.94e-12,25;UBERON:0006235,2.94e-12,25;UBERON:0004161,2.94e-12,25;UBERON:0009856,9.41e-12,26;UBERON:0002368,6.01e-11,35;UBERON:0005172,2.26e-10,54;UBERON:0005173,2.26e-10,54;UBERON:0002417,3.65e-09,60;UBERON:0000916,3.65e-09,60;UBERON:0000949,2.95e-08,45;UBERON:0002171,4.99e-08,1;UBERON:0006518,4.99e-08,1;UBERON:0008949,4.99e-08,1;UBERON:0000101,4.99e-08,1;UBERON:0002167,4.99e-08,1;UBERON:0000029,6.97e-08,1;UBERON:0002079,1.11e-07,1;UBERON:0002530,1.47e-07,59;UBERON:0001301,1.75e-07,1 | |||
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| ||
|short_description=p11@C3 | |||
}} | }} |
Latest revision as of 18:03, 24 September 2015
Short description: | p11@C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_C3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 160bp_to_ENST00000482703_5end |
EntrezGene: | C3 |
HGNC: | 1318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.15e-13 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.12e-16 | 19 |
digestive gland | 2.12e-16 | 19 |
liver bud | 2.12e-16 | 19 |
hepatic diverticulum | 4.78e-14 | 22 |
liver primordium | 4.78e-14 | 22 |
digestive tract diverticulum | 2.13e-13 | 23 |
exocrine gland | 1.72e-12 | 31 |
exocrine system | 1.72e-12 | 31 |
epithelial sac | 2.94e-12 | 25 |
epithelium of foregut-midgut junction | 2.94e-12 | 25 |
anatomical boundary | 2.94e-12 | 25 |
hepatobiliary system | 2.94e-12 | 25 |
foregut-midgut junction | 2.94e-12 | 25 |
septum transversum | 2.94e-12 | 25 |
sac | 9.41e-12 | 26 |
endocrine gland | 6.01e-11 | 35 |
abdomen element | 2.26e-10 | 54 |
abdominal segment element | 2.26e-10 | 54 |
abdominal segment of trunk | 3.65e-09 | 60 |
abdomen | 3.65e-09 | 60 |
endocrine system | 2.95e-08 | 45 |
lower lobe of right lung | 4.99e-08 | 1 |
right lung lobe | 4.99e-08 | 1 |
lower lobe of lung | 4.99e-08 | 1 |
lobe of lung | 4.99e-08 | 1 |
right lung | 4.99e-08 | 1 |
lymph node | 6.97e-08 | 1 |
left cardiac atrium | 1.11e-07 | 1 |
gland | 1.47e-07 | 59 |
epididymis | 1.75e-07 | 1 |