FFCP PHASE1:Hg19::chr20:21378129..21378142,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=644524 | |EntrezGene=644524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7837 | |HGNC=7837 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2Z4 | |UniProt=Q9H2Z4 | ||
|association_with_transcript=-82bp_to_NM_033176,uc010gcz.2_5end | |association_with_transcript=-82bp_to_NM_033176,uc010gcz.2_5end | ||
|cluster_id=chr20:21378129..21378142,- | |||
|description=CAGE_peak_2_at_NKX2-4_5end | |description=CAGE_peak_2_at_NKX2-4_5end | ||
|id=chr20:21378129..21378142,- | |id=chr20:21378129..21378142,- | ||
|ontology_enrichment_celltype=CL:0000167!2.83e-07!1;CL:0000164!2.83e-07!1;CL:0000502!2.83e-07!1;CL:0000172!2.83e-07!1;CL:0000173!2.83e-07!1;CL:0002351!2.83e-07!1;CL:0000313!4.09e-07!1 | |ontology_enrichment_celltype=CL:0000167!2.83e-07!1;CL:0000164!2.83e-07!1;CL:0000502!2.83e-07!1;CL:0000172!2.83e-07!1;CL:0000173!2.83e-07!1;CL:0002351!2.83e-07!1;CL:0000313!4.09e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.92e-11;2!CL:0000242;1.92e-11;2!CL:0002535;2.47e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.82e-11,2;CL:0002535,2.73e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;8.12e-09;10!UBERON:0007687;8.12e-09;10 | |||
|ontology_enrichment_disease=DOID:162!2.06e-16!235;DOID:14566!5.87e-16!239;DOID:171!4.40e-15!10;DOID:0050687!2.47e-14!143;DOID:0050686!3.61e-08!137;DOID:0060085!1.83e-07!1;DOID:3165!1.83e-07!1;DOID:0060121!1.83e-07!1;DOID:2438!1.83e-07!1;DOID:4418!1.83e-07!1;DOID:4430!2.83e-07!1;DOID:2152!4.09e-07!1;DOID:305!4.20e-07!106;DOID:3095!9.85e-07!22;DOID:2994!9.85e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:4362;5.91e-17;5!DOID:3193;1.92e-11;2!DOID:962;1.92e-11;2!DOID:1192;4.68e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,6.40e-17,5;DOID:3193,2.02e-11,2;DOID:962,2.02e-11,2;DOID:1192,4.84e-08,3;DOID:0050686,8.79e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0004911!4.09e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000002;2.66e-14;6!UBERON:0001560;2.66e-14;6!UBERON:0003714;1.92e-11;2!UBERON:0006955;2.47e-11;2!UBERON:0004801;2.47e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,2.85e-14,6;UBERON:0001560,2.85e-14,6;UBERON:0003714,2.02e-11,2;UBERON:0006955,2.73e-11,2;UBERON:0004801,2.73e-11,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99412993600995,0.894704431569664,2.33588798396672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27512572210559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,1.03423011972439,2.33283690706603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55549813004637,1.24425829676697,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.397429223405979,0,0.391102765469606,0,0,0,0,0,0.343189995723929,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,6.66636731609796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848662649770126,0.212574920101683,0.123935764259002,6.14509409770568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,3.50909195193158,0,0,0,0.109940516745429,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473314686579554,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99412993600995,0.894704431569664,2.33588798396672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27512572210559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,1.03423011972439,2.33283690706603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55549813004637,1.24425829676697,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.397429223405979,0,0.391102765469606,0,0,0,0,0,0.343189995723929,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,6.66636731609796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848662649770126,0.212574920101683,0.123935764259002,6.14509409770568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,3.50909195193158,0,0,0,0.109940516745429,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473314686579554,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@NKX2-4 | |short_description=p2@NKX2-4 | ||
}} | }} |
Latest revision as of 18:01, 24 September 2015
Short description: | p2@NKX2-4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NKX2-4_5end |
Coexpression cluster: | NA |
Association with transcript: | -82bp_to_NM_033176, uc010gcz.2_5end |
EntrezGene: | NKX2-4 |
HGNC: | 7837 |
UniProt: | Q9H2Z4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.82e-11 | 2 |
epithelial cell of cervix | 2.73e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 2.85e-14 | 6 |
neck of organ | 2.85e-14 | 6 |
neural tissue | 2.02e-11 | 2 |
uterine epithelium | 2.73e-11 | 2 |
cervix epithelium | 2.73e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 6.40e-17 | 5 |
peripheral nerve sheath neoplasm | 2.02e-11 | 2 |
neurofibroma | 2.02e-11 | 2 |
peripheral nervous system neoplasm | 4.84e-08 | 3 |
organ system cancer | 8.79e-07 | 137 |