FFCP PHASE1:Hg19::chrX:23802509..23802581,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6303 | |EntrezGene=6303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10540 | |HGNC=10540 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-288bp_to_ENST00000474223_5end | |association_with_transcript=-288bp_to_ENST00000474223_5end | ||
|cluster_id=chrX:23802509..23802581,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_SAT1_5end | |description=CAGE_peak_3_at_SAT1_5end | ||
|id=chrX:23802509..23802581,+ | |id=chrX:23802509..23802581,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.14e-33!76;CL:0000557!5.51e-30!71;CL:0002009!2.11e-29!65;CL:0002057!2.87e-29!42;CL:0002194!1.05e-28!63;CL:0000576!1.05e-28!63;CL:0000040!1.05e-28!63;CL:0000559!1.05e-28!63;CL:0000839!6.13e-27!70;CL:0000860!5.45e-26!45;CL:0000763!3.92e-23!112;CL:0000049!3.92e-23!112;CL:0000738!2.51e-21!140;CL:0002087!2.23e-16!119;CL:0002031!1.07e-15!124;CL:0002032!2.06e-15!165;CL:0000837!2.06e-15!165;CL:0000037!6.11e-15!172;CL:0000566!6.11e-15!172;CL:0000988!1.28e-12!182;CL:0000223!1.52e-07!59;CL:0002076!3.95e-07!43;CL:0002393!5.49e-07!9;CL:0002397!5.49e-07!9 | |ontology_enrichment_celltype=CL:0000766!1.14e-33!76;CL:0000557!5.51e-30!71;CL:0002009!2.11e-29!65;CL:0002057!2.87e-29!42;CL:0002194!1.05e-28!63;CL:0000576!1.05e-28!63;CL:0000040!1.05e-28!63;CL:0000559!1.05e-28!63;CL:0000839!6.13e-27!70;CL:0000860!5.45e-26!45;CL:0000763!3.92e-23!112;CL:0000049!3.92e-23!112;CL:0000738!2.51e-21!140;CL:0002087!2.23e-16!119;CL:0002031!1.07e-15!124;CL:0002032!2.06e-15!165;CL:0000837!2.06e-15!165;CL:0000037!6.11e-15!172;CL:0000566!6.11e-15!172;CL:0000988!1.28e-12!182;CL:0000223!1.52e-07!59;CL:0002076!3.95e-07!43;CL:0002393!5.49e-07!9;CL:0002397!5.49e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.55e-42;33!CL:0002057;4.55e-42;33!CL:0000576;1.77e-36;48!CL:0000473;6.58e-36;39!CL:0000234;6.58e-36;39!CL:0000766;4.29e-28;69!CL:0000763;2.51e-13;100!CL:0002087;6.96e-11;104!CL:0000094;1.53e-10;8!CL:0000738;2.51e-10;136!CL:0002393;4.31e-09;6!CL:0002397;4.31e-09;6!CL:0000081;3.72e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.50e-63,72;CL:0000473,2.70e-59,48;CL:0000234,2.70e-59,48;CL:0000860,9.65e-58,42;CL:0002057,9.65e-58,42;CL:0002194,2.09e-55,59;CL:0000576,2.09e-55,59;CL:0000040,2.09e-55,59;CL:0000559,2.09e-55,59;CL:0002009,4.57e-55,61;CL:0000557,2.00e-54,67;CL:0000839,1.24e-51,66;CL:0000763,2.01e-45,108;CL:0000049,2.01e-45,108;CL:0000738,1.36e-39,136;CL:0000037,3.34e-30,168;CL:0002087,4.21e-30,115;CL:0002032,1.94e-29,161;CL:0000837,1.94e-29,161;CL:0002031,4.74e-28,120;CL:0000988,2.07e-27,177;CL:0002393,1.59e-12,9;CL:0002397,1.59e-12,9;CL:0000134,5.22e-11,354;CL:0000094,1.16e-10,8;CL:0002320,2.56e-10,361;CL:0000219,8.98e-09,386;CL:0000081,3.07e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.05e-41;42!CL:0000049;2.84e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.52e-26!80;UBERON:0002390!4.65e-26!102;UBERON:0003061!4.65e-26!102;UBERON:0001474!2.22e-23!86;UBERON:0002193!3.81e-23!112;UBERON:0002405!7.99e-19!115;UBERON:0004765!4.15e-18!101;UBERON:0001434!4.15e-18!101;UBERON:0003081!1.27e-09!216;UBERON:0000926!3.78e-08!448;UBERON:0004120!3.78e-08!448;UBERON:0006603!3.78e-08!448;UBERON:0002204!2.14e-07!167 | |ontology_enrichment_uberon=UBERON:0002371!3.52e-26!80;UBERON:0002390!4.65e-26!102;UBERON:0003061!4.65e-26!102;UBERON:0001474!2.22e-23!86;UBERON:0002193!3.81e-23!112;UBERON:0002405!7.99e-19!115;UBERON:0004765!4.15e-18!101;UBERON:0001434!4.15e-18!101;UBERON:0003081!1.27e-09!216;UBERON:0000926!3.78e-08!448;UBERON:0004120!3.78e-08!448;UBERON:0006603!3.78e-08!448;UBERON:0002204!2.14e-07!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.62e-47,76;UBERON:0002390,3.96e-45,98;UBERON:0003061,3.96e-45,98;UBERON:0001474,4.33e-44,82;UBERON:0004765,6.64e-40,90;UBERON:0002193,6.72e-39,108;UBERON:0002405,1.40e-36,93;UBERON:0001434,6.59e-34,100;UBERON:0003081,2.04e-18,203;UBERON:0002204,5.06e-15,167;UBERON:0002384,2.88e-10,371;UBERON:0000926,6.65e-08,315;UBERON:0004120,6.65e-08,315;UBERON:0006603,6.65e-08,315 | |||
|phase1_expression=0,0.642301571672949,0.422863212287913,0,0.446961094427288,0,2.53299878168311,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,1.80808358407193,0.730310090387373,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,3.14691421479123,1.91914699048606,3.56077083626975,2.75826367343678,0.6024118375565,1.47901604066715,0.542270404062111,0.426507697462265,0,17.7278530730201,4.21143339687298,9.54847831149748,12.0914356089559,9.06902264853143,13.6515050846119,4.65274364094607,5.29026321164333,6.0646015296954,7.20530014407622,8.22335776043652,13.6270803193846,19.5630826779062,10.246428261164,31.6886188050704,22.7532149286168,14.2006630388442,5.41705946377367,8.28266293987461,10.9162460023138,18.2026022400519,36.4239831921374,45.5719218448053,51.7863071897223,15.5030111087757,12.9651377454061,18.7538890234385,23.7971575675439,17.0215567407342,25.5357122088186,15.3261685806613,13.037072960505,22.1532621599219,12.7133895553007,22.833213431229,53.1656810900686,6.33765858935825,6.80333759888139,5.2414661377094,2.47122988522289,7.0583139635508,9.16135844173357,3.99017841237748,7.55883373356542,3.47061892152804,0,0,0.889509253863555,0.426730222566507,0,0,0.661044872784862,0,2.27685187643779,1.17447437874188,2.29363936875137,0,0.560508562981536,0,0.786839080455332,0.393010762749165,1.64481199199607,0.334372990781356,0,0,0,0.111410456885174,1.17842362989935,0.443067789167242,1.89562704635511,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0.535081656179426,0,0.113309342697566,0,0.34362744548263,1.01207876807801,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.604820229674197,0,1.01377082717959,4.87613732627923,0,0.12786256184353,0.722878304769133,0,0,0,0,0.0945348171640679,0.443458794925128,0,0.130979075497713,0.364295288292542,0,1.29818957461873,2.43781632218974,0.664789802594326,0.238490624305342,0,0,0,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.208994966536811,0.775250277507987,0,0,0.402829317109147,1.52054421143703,0,0.367663080345869,1.62028389576352,0.446498641420399,0.673588117878509,0.225222960966644,0,0,1.09921046358244,6.58902087180316,34.9002237733493,0.872188104285069,0,0.379891534993739,0.926864265692532,0.286836620748814,0.354668382198357,0,1.06748995729705,0,0.311211035399766,0.67355336034844,0.163461903113459,0.605429710579726,0,0,0,0,0.149448680551801,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0.358779271377724,0,0,0.300091096084402,0.103052529238439,0,0,1.18143432568886,0,0.757301322732344,0.0920498986422993,0.161646056818812,0.710019185033229,0.201504196455281,0,1.15956511897978,1.63647672354501,0.860413786167011,0,0.265059536642971,0,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0,0.217879444092406,0.237270619111097,0,0,0.38474715694639,0,0,0.4115740113314,0,2.53510069643662,0.982827216677626,2.36315962672562,0,0.368965315629341,0,0.109750285408626,0,0.201057944823262,0.555530670951178,0,0,1.44331342025273,0,0,0.288732895522148,0,0.570762456703795,0,0,2.46217006087397,0.234004265139238,0.891786973732369,0.93733833986777,0.839910640994298,1.70130116690864,0,0.290633938513962,0,0,0.44024217006613,1.86595303986695,2.30591925467138,0.6312121671319,0.126995788584338,0.381988425558278,0,1.71072446022705,0.205654985406647,0.600686115687835,2.28661146104463,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0.65147236858747,0,0,0,0,0.699810938274399,3.64871341923571,4.52031382288914,18.9750545534728,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.537182889719687,0.224170287987055,0,0.646882724578552,1.02674429023799,0,0,0,0,0,2.24702107184155,11.966458368161,3.72973962092432,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,3.23571301227925,1.38745825144478,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0.154209693802656,0,0.246381468041427,1.03850885836724,0,0.604297247958111,0.601519410909855,0.460404944679482,0,0,0.131124414959424,0,0.924184045252977,0,2.92278449306521,0.422206515571503,0,0,0,0,0.541892875087706,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,1.03041011647722,0,0,0.574265537996172,0.650060246036521,0,0,0,0.15350367472613,0,0,0.290033387828457,0,0,1.4875642382488,0.768760269460425,12.5060458244692,3.4393645490887,0,0,0,0,0,0,0.37064843820784,0.429374660225974,0.372158369359667,0.316379424718726,0.571890581771475,0,0,0,0,0.179872457583315,0,0,0,1.58510321173008,0,0,0.487426979262569,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0,0,0,0.655894752046633,0,0,0.563391205064483,0.286822704408103,0,0,0,0,0,0,0,0.577332676353072,1.34060455107157,5.44454924306613,1.69458841398202,0.86101074534246,0,0,0.459446800413919,0.507447609232169,0,1.13929437434833,0.714695326373367,1.23408681925858,1.29694662238543,1.62009431171434,0.79312517629427,0.640944426764839,0,1.47024129588619,0.185803175125719,0.144269212976445,0.071141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| ||
|short_description=p3@SAT1 | |short_description=p3@SAT1 | ||
}} | }} |
Latest revision as of 17:59, 24 September 2015
Short description: | p3@SAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SAT1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -288bp_to_ENST00000474223_5end |
EntrezGene: | SAT1 |
HGNC: | 10540 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.50e-63 | 72 |
defensive cell | 2.70e-59 | 48 |
phagocyte | 2.70e-59 | 48 |
classical monocyte | 9.65e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.65e-58 | 42 |
monopoietic cell | 2.09e-55 | 59 |
monocyte | 2.09e-55 | 59 |
monoblast | 2.09e-55 | 59 |
promonocyte | 2.09e-55 | 59 |
macrophage dendritic cell progenitor | 4.57e-55 | 61 |
granulocyte monocyte progenitor cell | 2.00e-54 | 67 |
myeloid lineage restricted progenitor cell | 1.24e-51 | 66 |
myeloid cell | 2.01e-45 | 108 |
common myeloid progenitor | 2.01e-45 | 108 |
leukocyte | 1.36e-39 | 136 |
hematopoietic stem cell | 3.34e-30 | 168 |
nongranular leukocyte | 4.21e-30 | 115 |
hematopoietic oligopotent progenitor cell | 1.94e-29 | 161 |
hematopoietic multipotent progenitor cell | 1.94e-29 | 161 |
hematopoietic lineage restricted progenitor cell | 4.74e-28 | 120 |
hematopoietic cell | 2.07e-27 | 177 |
intermediate monocyte | 1.59e-12 | 9 |
CD14-positive, CD16-positive monocyte | 1.59e-12 | 9 |
mesenchymal cell | 5.22e-11 | 354 |
granulocyte | 1.16e-10 | 8 |
connective tissue cell | 2.56e-10 | 361 |
motile cell | 8.98e-09 | 386 |
blood cell | 3.07e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.62e-47 | 76 |
hematopoietic system | 3.96e-45 | 98 |
blood island | 3.96e-45 | 98 |
bone element | 4.33e-44 | 82 |
skeletal element | 6.64e-40 | 90 |
hemolymphoid system | 6.72e-39 | 108 |
immune system | 1.40e-36 | 93 |
skeletal system | 6.59e-34 | 100 |
lateral plate mesoderm | 2.04e-18 | 203 |
musculoskeletal system | 5.06e-15 | 167 |
connective tissue | 2.88e-10 | 371 |
mesoderm | 6.65e-08 | 315 |
mesoderm-derived structure | 6.65e-08 | 315 |
presumptive mesoderm | 6.65e-08 | 315 |