FFCP PHASE1:Hg19::chr12:72332748..72332760,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=121278 | |EntrezGene=121278 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20692 | |HGNC=20692 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFT1 | |UniProt=E9PFT1 | ||
|association_with_transcript=0bp_to_ENST00000266669,ENST00000546576_5end | |association_with_transcript=0bp_to_ENST00000266669,ENST00000546576_5end | ||
|cluster_id=chr12:72332748..72332760,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_3_at_TPH2_5end | |description=CAGE_peak_3_at_TPH2_5end | ||
|id=chr12:72332748..72332760,+ | |id=chr12:72332748..72332760,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002553;9.79e-26;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,7.62e-26,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.66e-55!57;UBERON:0005068!3.66e-55!57;UBERON:0006241!3.66e-55!57;UBERON:0007135!3.66e-55!57;UBERON:0001017!1.07e-53!82;UBERON:0005743!7.12e-51!86;UBERON:0000073!3.93e-48!94;UBERON:0001016!3.93e-48!94;UBERON:0000955!4.13e-47!69;UBERON:0006238!4.13e-47!69;UBERON:0002616!9.60e-46!59;UBERON:0002346!6.47e-43!90;UBERON:0002780!2.48e-41!41;UBERON:0001890!2.48e-41!41;UBERON:0006240!2.48e-41!41;UBERON:0003080!3.06e-40!42;UBERON:0003075!7.79e-37!86;UBERON:0007284!7.79e-37!86;UBERON:0001893!7.87e-37!34;UBERON:0002020!8.39e-37!34;UBERON:0003528!8.39e-37!34;UBERON:0002619!6.46e-36!22;UBERON:0001869!2.34e-35!32;UBERON:0002791!7.16e-34!33;UBERON:0007023!2.06e-32!115;UBERON:0000956!2.35e-31!25;UBERON:0000203!2.35e-31!25;UBERON:0001950!2.97e-29!20;UBERON:0003056!9.02e-29!61;UBERON:0000924!1.57e-27!173;UBERON:0006601!1.57e-27!173;UBERON:0000033!2.54e-25!123;UBERON:0000153!8.27e-24!129;UBERON:0007811!8.27e-24!129;UBERON:0004121!2.11e-23!169;UBERON:0000200!3.13e-17!6;UBERON:0003076!1.69e-15!15;UBERON:0003057!1.69e-15!15;UBERON:0002771!2.76e-13!3;UBERON:0000349!2.77e-13!5;UBERON:0001872!4.45e-13!5;UBERON:0000988!1.05e-12!3;UBERON:0001871!1.66e-12!7;UBERON:0000025!2.00e-12!194;UBERON:0002298!3.12e-12!8;UBERON:0004733!3.45e-11!12;UBERON:0002028!3.45e-11!12;UBERON:0007277!3.45e-11!12;UBERON:0004732!2.79e-10!13;UBERON:0000007!8.55e-10!2;UBERON:0001954!1.42e-09!2;UBERON:0003022!1.42e-09!2;UBERON:0002421!1.42e-09!2;UBERON:0002600!1.42e-09!2;UBERON:0002148!1.04e-08!2;UBERON:0009662!1.04e-08!2;UBERON:0004111!1.22e-08!241;UBERON:0000064!1.55e-07!219;UBERON:0002308!2.79e-07!9;UBERON:0000125!2.79e-07!9;UBERON:0002680!3.90e-07!9;UBERON:0001895!3.90e-07!9;UBERON:0010092!3.90e-07!9;UBERON:0000477!7.22e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.00e-50;2!UBERON:0003296;1.11e-25;4!UBERON:0010133;1.11e-25;4!UBERON:0001894;3.79e-15;7!UBERON:0001954;8.28e-14;2!UBERON:0003022;8.28e-14;2!UBERON:0002421;8.28e-14;2!UBERON:0002600;8.28e-14;2!UBERON:0002771;1.37e-13;2!UBERON:0000988;1.67e-09;3!UBERON:0000073;2.93e-08;53!UBERON:0002616;2.93e-08;53!UBERON:0002780;3.44e-07;41!UBERON:0001890;3.44e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.00e-50,2;UBERON:0003296,1.11e-25,4;UBERON:0010133,1.11e-25,4;UBERON:0001894,3.79e-15,7;UBERON:0006222,3.79e-15,7;UBERON:0001954,8.28e-14,2;UBERON:0003022,8.28e-14,2;UBERON:0002421,8.28e-14,2;UBERON:0002600,8.28e-14,2;UBERON:0002771,1.55e-13,2;UBERON:0000073,1.11e-11,53;UBERON:0002616,1.11e-11,53;UBERON:0001049,4.42e-11,56;UBERON:0005068,4.42e-11,56;UBERON:0006241,4.42e-11,56;UBERON:0007135,4.42e-11,56;UBERON:0002780,7.23e-10,41;UBERON:0001890,7.23e-10,41;UBERON:0003080,7.23e-10,41;UBERON:0006240,7.23e-10,41;UBERON:0000988,1.67e-09,3;UBERON:0000955,4.61e-09,68;UBERON:0006238,4.61e-09,68;UBERON:0001017,1.14e-07,81;UBERON:0003075,1.14e-07,82;UBERON:0007284,1.14e-07,82;UBERON:0002346,2.53e-07,86;UBERON:0001016,6.21e-07,89;UBERON:0003056,8.39e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,9.92289418201569,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.834912883456661,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0.949661939338181,0,0,0,0,0,0,4.28987494654911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,0.681017030557878,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.129282956361551,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09823638411767,0.751145584238999,0,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0.867550349813015,0,0,0,1.60114149657094,0,0,0.513833800771676,0,0.159633859057151,0,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,0.781078098613847,0.413373593002368,0.19024743058172,0,0,0,0.175871244359621,0,0,0,2.42786241694653,2.27662191351298,0,0,0,1.56330385846713,0.394636641377094,0,0,0,0.785577949580009,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.596852325484105,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,9.92289418201569,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.834912883456661,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0.949661939338181,0,0,0,0,0,0,4.28987494654911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,0.681017030557878,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.129282956361551,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09823638411767,0.751145584238999,0,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0.867550349813015,0,0,0,1.60114149657094,0,0,0.513833800771676,0,0.159633859057151,0,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,0.781078098613847,0.413373593002368,0.19024743058172,0,0,0,0.175871244359621,0,0,0,2.42786241694653,2.27662191351298,0,0,0,1.56330385846713,0.394636641377094,0,0,0,0.785577949580009,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.596852325484105,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@TPH2 | |short_description=p3@TPH2 | ||
}} | }} |
Latest revision as of 17:47, 24 September 2015
Short description: | p3@TPH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TPH2_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 0bp_to_ENST00000266669, ENST00000546576_5end |
EntrezGene: | TPH2 |
HGNC: | 20692 |
UniProt: | E9PFT1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 7.62e-26 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.00e-50 | 2 |
gland of diencephalon | 1.11e-25 | 4 |
neuroendocrine gland | 1.11e-25 | 4 |
diencephalon | 3.79e-15 | 7 |
future diencephalon | 3.79e-15 | 7 |
Ammon's horn | 8.28e-14 | 2 |
lobe parts of cerebral cortex | 8.28e-14 | 2 |
hippocampal formation | 8.28e-14 | 2 |
limbic lobe | 8.28e-14 | 2 |
middle temporal gyrus | 1.55e-13 | 2 |
regional part of nervous system | 1.11e-11 | 53 |
regional part of brain | 1.11e-11 | 53 |
neural tube | 4.42e-11 | 56 |
neural rod | 4.42e-11 | 56 |
future spinal cord | 4.42e-11 | 56 |
neural keel | 4.42e-11 | 56 |
regional part of forebrain | 7.23e-10 | 41 |
forebrain | 7.23e-10 | 41 |
anterior neural tube | 7.23e-10 | 41 |
future forebrain | 7.23e-10 | 41 |
pons | 1.67e-09 | 3 |
brain | 4.61e-09 | 68 |
future brain | 4.61e-09 | 68 |
central nervous system | 1.14e-07 | 81 |
neural plate | 1.14e-07 | 82 |
presumptive neural plate | 1.14e-07 | 82 |
neurectoderm | 2.53e-07 | 86 |
nervous system | 6.21e-07 | 89 |
pre-chordal neural plate | 8.39e-07 | 61 |