FFCP PHASE1:Hg19::chr5:134369683..134369708,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:134369683..134369708,- to FFCP PHASE1:Hg19::chr5:134369683..134369708,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5307 | |EntrezGene=5307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9004 | |HGNC=9004 | ||
|TSSclassifier=strong | |||
|UniProt=P78337 | |UniProt=P78337 | ||
|association_with_transcript=255bp_to_NM_002653,uc010jea.2_5end | |||
|cluster_id=chr5:134369683..134369708,- | |||
|description=CAGE_peak_7_at_PITX1_5end | |||
|id=chr5:134369683..134369708,- | |||
|ontology_enrichment_celltype=CL:0002076!3.59e-17!43;CL:0000223!7.52e-16!59;CL:0000066!1.11e-15!254;CL:0002251!5.99e-09!21;CL:0002368!8.65e-08!13;CL:0002202!8.14e-07!9;CL:0002632!8.14e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002202;4.96e-09;9!CL:0002632;4.96e-09;9!CL:0002368;1.39e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,6.94e-09,9;CL:0002632,6.94e-09,9;CL:0002076,1.01e-08,42;CL:0002368,1.44e-08,13;CL:0000223,9.59e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.27e-31!235;DOID:14566!1.32e-29!239;DOID:0050687!6.31e-25!143;DOID:305!6.57e-23!106;DOID:1749!6.81e-10!14;DOID:0050686!1.02e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:3307;1.68e-08;2!DOID:3910;1.87e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.61e-08,2;DOID:162,8.56e-08,235;DOID:14566,1.79e-07,239;DOID:3910,3.75e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001007!7.63e-20!155;UBERON:0001555!7.63e-20!155;UBERON:0007026!7.63e-20!155;UBERON:0004119!5.35e-18!169;UBERON:0000925!5.35e-18!169;UBERON:0006595!5.35e-18!169;UBERON:0004921!1.01e-16!129;UBERON:0004185!1.01e-16!129;UBERON:0001004!2.98e-15!72;UBERON:0000077!6.48e-14!130;UBERON:0008947!1.06e-11!38;UBERON:0003258!1.06e-11!38;UBERON:0001041!2.20e-11!98;UBERON:0000161!3.58e-11!35;UBERON:0000072!8.45e-11!46;UBERON:0000065!1.30e-10!53;UBERON:0005153!1.89e-09!37;UBERON:0005178!2.15e-08!34;UBERON:0002224!2.15e-08!34;UBERON:0005181!6.12e-08!35;UBERON:0003104!2.19e-07!238;UBERON:0009142!2.19e-07!238;UBERON:0000166!4.85e-07!21;UBERON:0003102!5.10e-07!95;UBERON:0005911!5.65e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.87e-07;2!UBERON:0002173;1.87e-07;2!UBERON:0002186;1.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.86e-07,74;UBERON:0004903,3.75e-07,2;UBERON:0002173,3.75e-07,2;UBERON:0002186,3.75e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.90361775633475,2.21852406100073,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0.795285947051099,0,0,0,0,0,0.728590576585084,0.370784442784429,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0.194874010322397,0,0,0.323292113637624,0,0,0.339121184620975,1.73934767846967,0.818238361772504,1.72082757233402,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0,1.65629520055781,1.51726221070292,0.964044119533928,1.21323370005633,0,0.237270619111097,1.34831308160164,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0.277765335475589,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0.268675568108545,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0.258543431515556,0,0,1.59562869950922,1.04007436911366,0.257207374262142,0,0.266422179016099,0,1.62786481617433,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,1.03473071292505,0,0,0.781952530212746,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.246381468041427,0,0,0.120859449591622,0.40101294060657,1.38121483403844,1.26295892981067,0,1.44236856455367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640986253728404,0.41254749960294,1.14853107599234,0,0,0.193341436584244,0,0,0.137836572484531,0.214840489736547,0,0,0.178064071293475,0.495854746082934,0.576570202095319,0,1.71968227454435,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,1.95053495635836,0,1.05650146756755,0.136499911407986,1.83827061539827,0,0,0,0,0.578775534266688,0,0.405820753925408,0,0.563391205064483,0.143411352204052,0,0,0,0.422215270595328,0,0.379473173765715,0,0.865999014529609,0.670302275535787,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,1.92495971052672,0.735120647943095,0.185803175125719,0,0,0.159426272728822,0,0,0,0,0,0,2.0368386450493,0,0,0,0,0,0,1.53620382154229,0.671028323677248,0.166849141711909,0,0,1.23087398947712,0.270455678475983,1.33228787199128,0,1.12284324244932,0,0,0,1.42068073403207,0,0,0,0,0,0,0,0.63337622438398,0,0,0,0.102268682502155,0,0,0.179736702294654,1.43216939740487,1.02314474045374,0.197286811273867,0,0,0,0,0,0.260427761085233,0.349839999984783,0,1.2517279311405,1.01701460117107,0,0,0,0.173624994933292,0,0,0,0,0,0,0.871507708151921,2.50962739701486,0.307801034015188,0,0.922255617552241,0.179515288819544,0.108647371922008,0,0.274792780205587,0,0,0,0.664846727600626,0,0.980312671588698,0.839107934879214,0.75901493089674,0,0,0,0.282706142867882,0,0,0.176915129006678,0,0,0,0,0,0,0,0.364909578431332,0.19566461893209,0,0,0,0,0,1.50323419414493,0.72581733978073,0,0,0,0,0,0.832048038078832,0.520679215005393,0.783939179315021,0.609414446062818,0,0,2.90268993867255,2.26576882967175,2.46346371159628,0.872901148395775,0,0,0.274083849293502,0.596143835108969,0,0.586654148204409,0.0801588202515337,0,0.19980960958213,0.864542502924636,0.572682980829578,0.171594997861965,0.720273989940749,0.124252535565433,4.00679858848552,0.67952103036807,0.313808538937,1.32597682927218,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.988990300573997,0.0674035438541849,0.393709926058995,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.0524545881349981,0.528001682597033,0.537862017998534,0.191915197319445,0,0,0,0,0,0,0,1.4776653734881,0,0.226624183040251,0,0,0,0,0.342173675768659,0.704815022316672,0,0,0,0,1.18566979138767,0.487170393523584,3.83004754662109,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0,0.499921631848426,0,0,0.235265819698172,0.468334905806882,0,0,0,0.554805861502613,0.568209015825267,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0.521988583930423,0.453411851024545,0.463044948647668,0,0,2.16161013012681,0.657852148736121,0.530067437837643,1.15748422962549,0.506827321959218,0,0.690860683462397,1.21543982470953,0,0,0,0,0,0,0.422624246717254,0,0,0,1.13503190713367,0,1.39879507719444,1.86623178009892,0.127894371303652,0.323474434190045,0,0,0.169732529954025,0,0.247871528518004,1.67593475391973,0.636008701306837,0.157723490002507,0,0.352675943690684,3.062454773532,0,0,0,0,0,0,0,0,1.27592034051333,0.11796972334774,0.733714394086716,0.808679663052368,0.381382095467167,0,0.795664888465099,0,0.20170506870352,0,0.2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| ||
|short_description=p7@PITX1 | |||
}} | }} |
Latest revision as of 17:41, 24 September 2015
Short description: | p7@PITX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PITX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 255bp_to_NM_002653, uc010jea.2_5end |
EntrezGene: | PITX1 |
HGNC: | 9004 |
UniProt: | P78337 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 6.94e-09 | 9 |
epithelial cell of lower respiratory tract | 6.94e-09 | 9 |
endo-epithelial cell | 1.01e-08 | 42 |
respiratory epithelial cell | 1.44e-08 | 13 |
endodermal cell | 9.59e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.86e-07 | 74 |
bronchoalveolar duct junction | 3.75e-07 | 2 |
alveolar duct | 3.75e-07 | 2 |
bronchiole | 3.75e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.61e-08 | 2 |
cancer | 8.56e-08 | 235 |
disease of cellular proliferation | 1.79e-07 | 239 |
lung adenocarcinoma | 3.75e-07 | 2 |