FFCP PHASE1:Hg19::chr6:130742231..130742252,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114801 | |EntrezGene=114801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21075 | |HGNC=21075 | ||
|TSSclassifier=strong | |||
|UniProt=A8K2A1 | |UniProt=A8K2A1 | ||
|association_with_transcript=0bp_to_ENST00000545622,uc010kfi.2_5end | |association_with_transcript=0bp_to_ENST00000545622,uc010kfi.2_5end | ||
|cluster_id=chr6:130742231..130742252,+ | |||
|coexpression_cluster_id=C472 | |coexpression_cluster_id=C472 | ||
|description=CAGE_peak_15_at_TMEM200A_5end | |description=CAGE_peak_15_at_TMEM200A_5end | ||
|id=chr6:130742231..130742252,+ | |id=chr6:130742231..130742252,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.50e-10;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!9.47e-40!22;UBERON:0001950!9.64e-39!20;UBERON:0000956!1.26e-34!25;UBERON:0000203!1.26e-34!25;UBERON:0001869!2.23e-33!32;UBERON:0001893!3.59e-31!34;UBERON:0002791!9.93e-29!33;UBERON:0002020!9.08e-28!34;UBERON:0003528!9.08e-28!34;UBERON:0002780!4.16e-25!41;UBERON:0001890!4.16e-25!41;UBERON:0006240!4.16e-25!41;UBERON:0003080!2.10e-24!42;UBERON:0000200!4.83e-20!6;UBERON:0000955!1.23e-19!69;UBERON:0006238!1.23e-19!69;UBERON:0005743!2.55e-19!86;UBERON:0003056!6.42e-19!61;UBERON:0001017!6.58e-19!82;UBERON:0001049!1.26e-18!57;UBERON:0005068!1.26e-18!57;UBERON:0006241!1.26e-18!57;UBERON:0007135!1.26e-18!57;UBERON:0000073!1.89e-18!94;UBERON:0001016!1.89e-18!94;UBERON:0002616!7.90e-18!59;UBERON:0003075!4.05e-16!86;UBERON:0007284!4.05e-16!86;UBERON:0007023!9.57e-16!115;UBERON:0001871!2.96e-15!7;UBERON:0002346!3.88e-15!90;UBERON:0000153!8.49e-12!129;UBERON:0007811!8.49e-12!129;UBERON:0000349!8.98e-12!5;UBERON:0000033!1.25e-11!123;UBERON:0001872!4.29e-11!5;UBERON:0002771!1.14e-10!3;UBERON:0004121!5.13e-09!169;UBERON:0000924!1.18e-08!173;UBERON:0006601!1.18e-08!173;UBERON:0001876!2.51e-08!2;UBERON:0001870!3.67e-08!2;UBERON:0000025!7.87e-08!194;UBERON:0002360!2.09e-07!2;UBERON:0000094!2.09e-07!2;UBERON:0007645!2.09e-07!2;UBERON:0000119!5.19e-07!312;UBERON:0002021!6.79e-07!5 | |ontology_enrichment_uberon=UBERON:0002619!9.47e-40!22;UBERON:0001950!9.64e-39!20;UBERON:0000956!1.26e-34!25;UBERON:0000203!1.26e-34!25;UBERON:0001869!2.23e-33!32;UBERON:0001893!3.59e-31!34;UBERON:0002791!9.93e-29!33;UBERON:0002020!9.08e-28!34;UBERON:0003528!9.08e-28!34;UBERON:0002780!4.16e-25!41;UBERON:0001890!4.16e-25!41;UBERON:0006240!4.16e-25!41;UBERON:0003080!2.10e-24!42;UBERON:0000200!4.83e-20!6;UBERON:0000955!1.23e-19!69;UBERON:0006238!1.23e-19!69;UBERON:0005743!2.55e-19!86;UBERON:0003056!6.42e-19!61;UBERON:0001017!6.58e-19!82;UBERON:0001049!1.26e-18!57;UBERON:0005068!1.26e-18!57;UBERON:0006241!1.26e-18!57;UBERON:0007135!1.26e-18!57;UBERON:0000073!1.89e-18!94;UBERON:0001016!1.89e-18!94;UBERON:0002616!7.90e-18!59;UBERON:0003075!4.05e-16!86;UBERON:0007284!4.05e-16!86;UBERON:0007023!9.57e-16!115;UBERON:0001871!2.96e-15!7;UBERON:0002346!3.88e-15!90;UBERON:0000153!8.49e-12!129;UBERON:0007811!8.49e-12!129;UBERON:0000349!8.98e-12!5;UBERON:0000033!1.25e-11!123;UBERON:0001872!4.29e-11!5;UBERON:0002771!1.14e-10!3;UBERON:0004121!5.13e-09!169;UBERON:0000924!1.18e-08!173;UBERON:0006601!1.18e-08!173;UBERON:0001876!2.51e-08!2;UBERON:0001870!3.67e-08!2;UBERON:0000025!7.87e-08!194;UBERON:0002360!2.09e-07!2;UBERON:0000094!2.09e-07!2;UBERON:0007645!2.09e-07!2;UBERON:0000119!5.19e-07!312;UBERON:0002021!6.79e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.47e-61;22!UBERON:0001950;3.63e-56;20!UBERON:0000956;1.34e-53;25!UBERON:0000203;1.34e-53;25!UBERON:0001869;1.84e-53;32!UBERON:0001893;1.08e-48;34!UBERON:0002791;4.67e-47;32!UBERON:0003528;1.09e-41;34!UBERON:0002020;1.09e-41;34!UBERON:0002780;1.62e-33;41!UBERON:0001890;1.62e-33;41!UBERON:0000349;3.03e-32;5!UBERON:0001871;1.26e-23;6!UBERON:0001876;1.61e-21;2!UBERON:0000073;3.04e-20;53!UBERON:0002616;3.04e-20;53!UBERON:0001017;9.80e-16;75!UBERON:0000200;1.88e-15;6!UBERON:0000955;3.10e-15;68!UBERON:0001870;2.96e-14;3!UBERON:0002022;1.01e-11;1!UBERON:0001882;3.81e-11;1!UBERON:0003112;3.81e-11;1!UBERON:0011158;3.81e-11;1!UBERON:0007190;3.81e-11;1!UBERON:0003128;3.81e-11;1!UBERON:0005403;3.81e-11;1!UBERON:0001703;3.81e-11;1!UBERON:0002241;3.81e-11;1!UBERON:0001016;4.69e-11;83!UBERON:0007023;6.85e-11;114!UBERON:0002420;1.06e-10;9!UBERON:0007245;1.06e-10;9!UBERON:0010009;1.06e-10;9!UBERON:0010011;1.06e-10;9!UBERON:0000454;1.06e-10;9!UBERON:0002021;4.68e-09;5!UBERON:0001872;8.84e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,9.44e-61,22;UBERON:0001869,4.92e-57,32;UBERON:0001950,4.38e-56,20;UBERON:0001893,1.15e-53,34;UBERON:0000956,1.48e-53,25;UBERON:0000203,1.48e-53,25;UBERON:0002791,3.50e-49,32;UBERON:0003528,2.87e-46,34;UBERON:0002020,2.87e-46,34;UBERON:0002780,2.13e-44,41;UBERON:0001890,2.13e-44,41;UBERON:0003080,2.13e-44,41;UBERON:0006240,2.13e-44,41;UBERON:0000073,4.34e-34,53;UBERON:0002616,4.34e-34,53;UBERON:0000955,4.36e-34,68;UBERON:0006238,4.36e-34,68;UBERON:0000349,2.29e-32,5;UBERON:0001017,2.97e-32,81;UBERON:0001049,3.45e-32,56;UBERON:0005068,3.45e-32,56;UBERON:0006241,3.45e-32,56;UBERON:0007135,3.45e-32,56;UBERON:0003056,1.99e-29,61;UBERON:0001016,7.25e-29,89;UBERON:0007023,8.59e-26,114;UBERON:0001871,1.19e-23,6;UBERON:0003075,1.86e-21,82;UBERON:0007284,1.86e-21,82;UBERON:0001876,1.88e-21,2;UBERON:0002346,2.25e-20,86;UBERON:0010371,1.63e-16,104;UBERON:0000200,1.58e-15,6;UBERON:0010314,1.32e-14,132;UBERON:0001870,2.59e-14,3;UBERON:0004121,4.30e-14,171;UBERON:0000924,4.30e-14,171;UBERON:0006601,4.30e-14,171;UBERON:0002022,1.06e-11,1;UBERON:0011216,1.17e-11,223;UBERON:0001882,2.68e-11,1;UBERON:0005403,2.68e-11,1;UBERON:0003112,3.63e-11,1;UBERON:0011158,3.63e-11,1;UBERON:0003128,3.63e-11,1;UBERON:0001703,3.63e-11,1;UBERON:0002241,3.63e-11,1;UBERON:0004761,3.63e-11,1;UBERON:0009617,3.63e-11,1;UBERON:0007190,4.44e-11,1;UBERON:0002420,9.96e-11,9;UBERON:0007245,9.96e-11,9;UBERON:0010009,9.96e-11,9;UBERON:0010011,9.96e-11,9;UBERON:0000454,9.96e-11,9;UBERON:0002021,5.07e-09,5;UBERON:0001872,1.04e-08,5;UBERON:0000025,5.62e-08,192 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9180670687282,2.11004124615769,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,2.90799823828566,1.48428957058962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97446857438575,0,0,0,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,2.65905343014691,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63444087333891,0,0,0,0,0,4.61696630600987,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,2.92863035764712,0.500763722825999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,1.92687675289379,2.8339315265117,0,2.05116364240755,0,0.622415272177961,1.61475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55336444622308,1.56215619722769,0.206686796501184,1.33173201407204,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.855046056317038,0,0,0,0,0,0,0,0,0.0714765441766563,0,4.99838129082939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73953196050031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9180670687282,2.11004124615769,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,2.90799823828566,1.48428957058962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97446857438575,0,0,0,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,2.65905343014691,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63444087333891,0,0,0,0,0,4.61696630600987,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,2.92863035764712,0.500763722825999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,1.92687675289379,2.8339315265117,0,2.05116364240755,0,0.622415272177961,1.61475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55336444622308,1.56215619722769,0.206686796501184,1.33173201407204,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.855046056317038,0,0,0,0,0,0,0,0,0.0714765441766563,0,4.99838129082939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73953196050031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p15@TMEM200A | |short_description=p15@TMEM200A | ||
}} | }} |
Latest revision as of 17:41, 24 September 2015
Short description: | p15@TMEM200A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_TMEM200A_5end |
Coexpression cluster: | C472_amygdala_medial_hippocampus_insula_frontal_temporal_paracentral |
Association with transcript: | 0bp_to_ENST00000545622, uc010kfi.2_5end |
EntrezGene: | TMEM200A |
HGNC: | 21075 |
UniProt: | A8K2A1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data