FFCP PHASE1:Hg19::chr6:130687547..130687569,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=21075 | |||
|TSSclassifier=strong | |||
|UniProt=A8K2A1 | |||
|association_with_transcript=17bp_to_AK315824_5end | |||
|cluster_id=chr6:130687547..130687569,+ | |||
|coexpression_cluster_id=C714 | |||
|description=CAGE_peak_2_at_TMEM200A_5end | |||
|id=chr6:130687547..130687569,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.76e-40!180;CL:0000680!6.22e-22!57;CL:0000056!6.22e-22!57;CL:0000355!6.22e-22!57;CL:0000187!1.21e-21!54;CL:0000393!4.33e-20!60;CL:0000211!4.33e-20!60;CL:0000192!5.50e-20!42;CL:0000514!5.50e-20!42;CL:0000359!9.48e-19!32;CL:0000183!4.04e-18!59;CL:0000057!4.14e-18!75;CL:0002620!5.77e-09!23;CL:0000222!7.14e-09!119;CL:0000723!1.84e-07!436;CL:0000034!2.19e-07!444;CL:0002334!2.62e-07!12;CL:0000048!3.20e-07!430;CL:0002539!4.54e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.69e-21;32!CL:0000192;3.36e-18;43!CL:0000187;5.74e-13;55!CL:0000393;3.46e-11;61!CL:0000211;3.46e-11;61!CL:0002620;2.68e-10;23!CL:0002334;1.01e-08;12!CL:0002539;1.98e-08;10!CL:0000057;9.99e-08;73!CL:0002320;7.06e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.88e-25,55;CL:0000192,2.44e-25,43;CL:0000514,2.44e-25,43;CL:0000680,3.91e-25,58;CL:0000056,3.91e-25,58;CL:0000355,3.91e-25,58;CL:0000359,4.48e-23,32;CL:0000393,9.64e-22,61;CL:0000211,9.64e-22,61;CL:0000057,5.40e-20,76;CL:0000723,1.84e-15,433;CL:0000048,7.27e-15,427;CL:0000034,7.79e-15,441;CL:0000222,9.27e-11,121;CL:0002620,2.02e-10,23;CL:0002334,9.31e-09,12;CL:0002539,1.85e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000514;3.36e-18;43!CL:0000355;1.53e-12;58 | |||
|ontology_enrichment_disease=DOID:2394!5.89e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.63e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.24e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.05e-23!83;UBERON:0002329!7.05e-23!83;UBERON:0003077!7.05e-23!83;UBERON:0003059!7.05e-23!83;UBERON:0007282!7.05e-23!83;UBERON:0009618!7.05e-23!83;UBERON:0007285!7.05e-23!83;UBERON:0004290!3.33e-20!70;UBERON:0001134!2.96e-19!61;UBERON:0002036!2.96e-19!61;UBERON:0003082!2.96e-19!61;UBERON:0000486!5.02e-19!82;UBERON:0002385!9.80e-19!63;UBERON:0001015!9.80e-19!63;UBERON:0000383!9.80e-19!63;UBERON:0005256!1.04e-11!143;UBERON:0000475!1.04e-11!365;UBERON:0001637!1.24e-11!42;UBERON:0003509!1.24e-11!42;UBERON:0004572!1.24e-11!42;UBERON:0004573!2.11e-10!33;UBERON:0004571!2.11e-10!33;UBERON:0002049!1.68e-08!79;UBERON:0007798!1.68e-08!79;UBERON:0003102!1.84e-08!95;UBERON:0002100!3.16e-08!216;UBERON:0002199!1.62e-07!45;UBERON:0002416!1.62e-07!45;UBERON:0004872!2.16e-07!84;UBERON:0004237!4.54e-07!10;UBERON:0004695!4.54e-07!10;UBERON:0002111!4.54e-07!10;UBERON:0004178!4.54e-07!10;UBERON:0002097!5.64e-07!40;UBERON:0001981!5.73e-07!60;UBERON:0007500!5.73e-07!60;UBERON:0004537!5.73e-07!60;UBERON:0006965!5.73e-07!60;UBERON:0001135!6.27e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.42e-12;33!UBERON:0004571;7.42e-12;33!UBERON:0001637;2.59e-09;42!UBERON:0003509;2.59e-09;42!UBERON:0004572;2.59e-09;42!UBERON:0004237;1.98e-08;10!UBERON:0004695;1.98e-08;10!UBERON:0002111;1.98e-08;10!UBERON:0004178;1.98e-08;10!UBERON:0001135;2.10e-07;15!UBERON:0002097;2.98e-07;41!UBERON:0002199;4.82e-07;46!UBERON:0002416;4.82e-07;46!UBERON:0002384;8.57e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,5.03e-23,71;UBERON:0003059,5.03e-23,71;UBERON:0007282,5.03e-23,71;UBERON:0004290,5.03e-23,71;UBERON:0009618,5.03e-23,71;UBERON:0007524,9.33e-23,73;UBERON:0003077,2.20e-22,72;UBERON:0007285,2.20e-22,72;UBERON:0000486,2.48e-22,83;UBERON:0001134,3.95e-22,62;UBERON:0002036,3.95e-22,62;UBERON:0003082,3.95e-22,62;UBERON:0002385,8.76e-21,64;UBERON:0001015,8.76e-21,64;UBERON:0000383,8.76e-21,64;UBERON:0007503,1.25e-19,78;UBERON:0001637,3.31e-14,42;UBERON:0003509,3.31e-14,42;UBERON:0004572,3.31e-14,42;UBERON:0004573,2.38e-13,33;UBERON:0004571,2.38e-13,33;UBERON:0005256,2.35e-11,122;UBERON:0003104,3.27e-10,160;UBERON:0009142,3.27e-10,160;UBERON:0002049,3.68e-10,78;UBERON:0007798,3.68e-10,78;UBERON:0003102,1.10e-09,99;UBERON:0002199,1.67e-09,46;UBERON:0002416,1.67e-09,46;UBERON:0007500,2.72e-09,59;UBERON:0001981,2.72e-09,59;UBERON:0004537,2.72e-09,59;UBERON:0006965,2.72e-09,59;UBERON:0002097,4.41e-09,41;UBERON:0004872,9.85e-09,83;UBERON:0004237,1.85e-08,10;UBERON:0004695,1.85e-08,10;UBERON:0002111,1.85e-08,10;UBERON:0004178,1.85e-08,10;UBERON:0000055,5.12e-08,68;UBERON:0000490,1.41e-07,148;UBERON:0004535,1.77e-07,109;UBERON:0002100,1.79e-07,199;UBERON:0001135,2.03e-07,15;UBERON:0001009,7.30e-07,112 | |||
|phase1_expression=8.53888382571616,4.92431204949261,8.03440103347036,3.00219895059391,2.68176656656373,10.4680622892044,0,3.15859936713415,0.522371256399677,0.737201809504527,0,0,0.263766978228454,2.22779435328084,2.65117900582333,10.0848771967766,16.2727522566474,9.49403117503585,8.29485757943862,0.738726348460727,1.02000345622126,0.313454721478088,0.286235987131057,0.136874425072884,0,0.534893840235659,0.246301768349837,0.236132343941038,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0.689491361473237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.68152568894461,0,0.393419540227666,0.393010762749165,0.411202997999018,0,0,0,0,0.779873198196215,0.294605907474837,0,0,0.128091319725675,0.260118695119756,0.986627427622057,0.829050053357545,0.579606171470105,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,1.24930726552346,0.236777252044017,0,0.201606743224732,0.267440195783507,0,7.31420598941885,3.35350429851818,0.511450247374121,2.1686349143074,5.0133791063589,2.17269778441236,9.54343136461319,1.45990461090791,2.26883561193763,4.65631734671384,4.12823492757692,2.29213382120997,1.45718115317017,0,1.29818957461873,1.56716763569341,0.132957960518865,0,0,0,0,0,0,0,0,0,0.417989933073621,0.516833518338658,0.71153252537342,1.00416183829401,0,0,0,0,0,0,0,0,0,0,1.09921046358244,0,0,0,4.96971951695318,16.8418580513891,23.9660617271926,57.0804875290139,17.0240823455211,4.48542080113846,1.06748995729705,0.49333509683432,1.55605517699883,0,1.30769522490767,0.605429710579726,0.576175924479999,0.468642863667593,0.624320153660641,2.2818872861778,11.0592023608333,3.75790395660048,1.29498355494505,1.68540968042698,0.61246251376468,2.45668634623536,1.44656093646072,2.37600571456411,4.94533858557114,3.64064544775211,5.03032699271367,3.03005005117319,1.7516592782075,1.10825646193673,3.07284334616587,6.74273150757843,5.10809400282429,0.680593098960126,20.0916391971525,13.6676728843883,11.8681864649355,7.80236849819446,5.25567899116038,12.1091053821446,9.86419338557426,23.459910181536,10.4257595522483,3.78650661366172,6.71964260088785,8.24394889775941,15.2654124782144,3.72782763442269,4.91725717700414,6.76412986071539,8.18238361772504,1.43402297694502,0.365921118388786,0.265059536642971,0.232387885739037,0.207322110030741,0,0.36497735907583,0,3.21620469096443,4.14404764057442,0.928735856063958,4.33127689001751,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.983907508344908,5.14703430895577,2.52425656439839,1.1240175325762,6.23279628952111,2.12953423864618,3.9096996637239,0,2.88662684050547,5.10093781890338,6.45747818297019,0,0,0,0,0,0,0,0,0.93733833986777,4.70349958956807,4.67857820899875,3.76145795351963,4.35950907770943,10.3513323374607,0,0,0,0.432359860250884,0.25248486685276,0.063497894292169,0,0,1.71072446022705,1.13110241973656,0,0,3.1396703616701,2.1798003441664,6.8937988671693,39.6864167376378,0,0,21.0091112102048,14.5610411675913,1.28603687131071,1.41849132023278,1.5985330740966,0,3.25572963234866,0.823240336780769,1.62868092146868,0,8.71147060226772,22.3065139024094,13.0730018790044,21.7941120776884,0,0,0,4.0736225433569,0,28.5273810081437,2.17171960001369,3.08214483825575,0.716243852959582,0,0,0,0,1.01637849688985,1.30139853857622,1.54657762555539,0.502548796003046,0,0,0,0,2.4538298343828,4.50153468953709,6.23909554509392,4.15941723061614,4.63915370872621,0.315404830067869,3.16281820480326,6.92176029373754,9.09630016223939,8.27784570340039,17.2698655619213,20.6493468766708,4.51794795234031,0,0,0,0,0,0,0,0.30239029332968,19.8486246255021,17.9550508747033,7.29716245525991,14.8641413136613,8.18731598506726,13.9942911394939,1.48418066444991,9.56100101576464,13.3171293984845,7.47357119725663,8.82732529612156,9.4130406552567,0.966875596732978,2.00506470303285,0.184161977871793,4.59257792658427,8.01201139229555,1.70461739447251,0.451199612907412,5.00599691178696,0,0,2.53323909342902,0,0,1.51141141271498,0,0.541892875087706,0,0.509752546090077,0,0.447749509444357,0,0,1.28225062558195,0.984043937099117,0.650756789328606,0.721287081534056,0.27470839445503,0,4.01985876597321,0,17.6752322828576,5.12354806948246,1.07834031980251,0.767518373630648,2.06754858726796,0.322260734604821,1.88521702088497,1.78975917573812,2.58192903375538,0,0,0,0,8.36721988735114,148.591427704062,26.4874162661028,4.92853728281742,10.6461206063404,36.5371856671531,31.5051172476664,9.01686786474545,1.48863347743867,4.11293252134344,3.8126038784765,1.02359116524534,4.70732886837312,31.1839182967418,5.49464048139461,3.41757669408298,4.11805544604082,3.53437207037059,7.27856933663938,4.75530963519025,4.63384301862879,0,21.2030735979217,32.7515454945942,8.87249424151907,5.09059555033366,19.2113798254413,19.2977870241143,18.5762913067542,27.6224057709871,1.73632660280006,2.62357900818653,31.6540188061818,12.0831164258903,23.380735010176,23.0892277048523,14.9338542339944,26.3936578096125,16.6737700113181,3.37772216476263,1.31717957183961,3.41525856389144,3.49934720244983,0,0.670302275535787,0,0.282431402330337,0,1.68471475667626,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53204296105893,0,0,0,0,0,0,1.52362600021443,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,2.05111450980652,0,0.445773537109913,0,0,0,0,0.994147647766298,0.281338832821026,13.4683533077716,0.16480387422676,0,0.796991953004279,1.38141957765574,3.27512572210559,20.6582738654353,0,14.9299002077668,0,0,0,1.08507746200627,0,0,0,0.185536196323703,1.99613798001194,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0.295547618953547,0.438770794307945,0,0,1.76985594558733,4.89950840142105,0,0,0,0.638002319463839,5.67905079091546,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0.282706142867882,0.432777279484182,0,0.442287822516696,0.611030144933625,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0.91821828489147,1.45329133145522,0,0,1.32930774541437,0.992975867626496,3.13932918407225,2.38944859545918,0,0,0,0,0,1.39781334593624,0,0,0,0,0.290967049465258,0,1.80784592624426,7.8113897048648,7.35244063301062,0.126621591911757,0,5.05000567584662,0,1.9980960958213,0,0,0.686379991447858,0,6.08837424270619,0,2.44627570932505,3.03348254305766,0,6.64586356773493,0,0,0,12.8929632425987,0,0,0,0,0.199679000498991,0,0.223171457441873,0.134366944973453,11.1692963898145,0,0,0,0,0,0.169346664131569,0.795229689809303,0,0.160753148465019,0.962776056180637,0.415440338029185,1.799791132412,0,0.546746009922222,0,2.12775409707835,1.62609223218494,10.8768346614989,0,12.4744878257639,0,0,0,13.0319904420891,22.469758771233,17.3091300857987,13.1703210718736,0.985110248992068,21.2985027231777,2.26624183040251,0.146552233678082,0,0.387848869084652,0.39669780522807,0,0,3.41719720216623,1.25763444079733,0.828478110694391,0.496166021811951,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0.244052529803926,0,0,0.110929051536852,0.372578417648301,0,0.37494122388632,0,0,8.23430368943601,0,0,3.88062487505873,3.50569964770837,16.6441758450784,7.57612021100357,5.78606174030923,14.2369795455446,9.84012294106771,20.7186365555637,11.9686644448741,6.65348174953353,15.4517864148791,5.84744045812686,7.29735897318419,23.2235476390879,34.0277394634233,14.0871166689168,12.4713815467691,24.7523387909717,16.6817000613911,10.5472222337484,13.855961858481,32.9463969513731,10.7485889948626,0,8.92828833475262,10.7759836405094,0,0,0.857766365499703,0.260994291965212,0,0.694567422971502,0.734210113519403,0.537266523244462,0,2.63140859494449,8.30438985945641,5.01576499504378,1.01365464391844,0,0,1.21543982470953,0.138258436151731,1.16916185303633,3.05589132720735,2.12635012532597,0.327609848846413,0.737318726261158,0.211312123358627,1.59989916683944,0,0,0,12.1509927166215,0,0.622077260032973,0.127894371303652,0,0.314531883711793,0,0,0.637724760305049,0,0,6.36008701306837,0,1.60114149657094,3.87943538059752,0.3062454773532,0.192687675289379,0,0,0.205116364240755,1.51243017733031,0.138314504928436,0.161475645631851,0,0,0,0.917142992608395,4.50550097986319,2.66967466827017,13.807198521202,0.994581110581374,4.28698871590766,0.80682027481408,0,0,0.163771917510097,0,0.202612753855184,0,0,0.0634158101939068,0.546974809018219,0,0.496211178389294,0,0,4.82131652290458,0.336283722218824,3.03482802118316,3.41493287026946,0.620916591138472,0.576169937778896,0,0.339848664884159,0.263091094251396,0,0.111231401892069,0.941917114206168,0,0.840816489941367,2.73947616152849,0,0,1.42953088353313,0,0,0,1.60342272946051,0,0,0,0,9.2298960569841,12.441157094837,0,1.3746412112643,0.31020638566432,0,0,0,0,0,0.513314034281235,0,1.45713297917742,0,0.994753875806841,0.118920090777569,0.11294608203896,0,0,0.231522474323834,2.40415516554353,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,13.934023404401,0.187967835959707,0.193373663920732,0,0,31.0547487109809,0,1.46067277649303,0.458729283404541,0.143339583151451,0,0.203974470572744,0.436350690340377,1.0580536810308,2.23197010900051,6.93263442947127,2.16313281061895,0,0,0,0.101988829741982,0,0,0,1.28823786971007,0.803892390468535,0,0,0.213233981900981,0.476128862927481,0.775066918032073,0.434523000071005,6.84004361741742,0.827413057616144,0,0,0,0.0673520530145875,0.78894425931944,0.99798106963804,6.59366475748894,0.106727345877715,3.8614456457388,0,4.69281884806909,6.84552087424052,0.406896178315738,0.665756774185513,0.402547587182052,0 | |||
|short_description=p2@TMEM200A | |||
}} |
Latest revision as of 17:36, 24 September 2015
Short description: | p2@TMEM200A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM200A_5end |
Coexpression cluster: | C714_Smooth_Fibroblast_Mesenchymal_mesenchymal_Myoblast_leiomyoma_Preadipocyte |
Association with transcript: | 17bp_to_AK315824_5end |
EntrezGene: | TMEM200A |
HGNC: | 21075 |
UniProt: | A8K2A1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.88e-25 | 55 |
smooth muscle cell | 2.44e-25 | 43 |
smooth muscle myoblast | 2.44e-25 | 43 |
muscle precursor cell | 3.91e-25 | 58 |
myoblast | 3.91e-25 | 58 |
multi-potent skeletal muscle stem cell | 3.91e-25 | 58 |
vascular associated smooth muscle cell | 4.48e-23 | 32 |
electrically responsive cell | 9.64e-22 | 61 |
electrically active cell | 9.64e-22 | 61 |
fibroblast | 5.40e-20 | 76 |
somatic stem cell | 1.84e-15 | 433 |
multi fate stem cell | 7.27e-15 | 427 |
stem cell | 7.79e-15 | 441 |
mesodermal cell | 9.27e-11 | 121 |
skin fibroblast | 2.02e-10 | 23 |
preadipocyte | 9.31e-09 | 12 |
aortic smooth muscle cell | 1.85e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.24e-10 | 14 |