FFCP PHASE1:Hg19::chr2:219264641..219264672,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:219264641..219264672,+
|short_description=p3@CTDSP1
|description=CAGE_peak_3_at_CTDSP1_5end
|association_with_transcript=-121bp_to_ENST00000497677_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58190 | |EntrezGene=58190 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21614 | |HGNC=21614 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-121bp_to_ENST00000497677_5end | |||
|cluster_id=chr2:219264641..219264672,+ | |||
|description=CAGE_peak_3_at_CTDSP1_5end | |||
|id=chr2:219264641..219264672,+ | |||
|ontology_enrichment_celltype=CL:0000115!1.54e-18!35;CL:0002139!1.02e-14!24;CL:0002078!1.84e-13!44;CL:0000071!2.83e-11!18;CL:0002546!2.83e-11!18;CL:0002320!5.58e-09!365;CL:0002371!9.09e-09!591;CL:0000048!1.11e-08!430;CL:0000723!7.58e-08!436;CL:0000213!8.67e-08!57;CL:0000215!8.67e-08!57;CL:0000134!1.50e-07!358;CL:0000034!1.73e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.92e-16;36!CL:0002139;6.82e-15;24!CL:0000071;1.98e-11;18!CL:0002078;1.79e-09;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.34e-19,36;CL:0002139,9.78e-15,24;CL:0002078,6.76e-14,45;CL:0000071,2.75e-11,18;CL:0002546,2.75e-11,18;CL:0002320,2.03e-09,361;CL:0000048,5.67e-09,427;CL:0000213,3.08e-08,58;CL:0000215,3.08e-08,58;CL:0000723,4.42e-08,433;CL:0000134,6.03e-08,354;CL:0000034,1.03e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002546;1.98e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.28e-17!216;UBERON:0004535!9.21e-15!110;UBERON:0001009!2.21e-14!113;UBERON:0001986!2.83e-11!18;UBERON:0004638!2.83e-11!18;UBERON:0004852!2.83e-11!18;UBERON:0004872!3.51e-11!84;UBERON:0002049!1.28e-10!79;UBERON:0007798!1.28e-10!79;UBERON:0000055!3.89e-10!69;UBERON:0006914!4.98e-10!25;UBERON:0000487!7.07e-10!22;UBERON:0003914!1.16e-08!118;UBERON:0000926!2.91e-08!448;UBERON:0004120!2.91e-08!448;UBERON:0006603!2.91e-08!448;UBERON:0002384!6.08e-08!375;UBERON:0001981!7.27e-08!60;UBERON:0007500!7.27e-08!60;UBERON:0004537!7.27e-08!60;UBERON:0006965!7.27e-08!60;UBERON:0002193!8.22e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.98e-11;18!UBERON:0001986;1.98e-11;18!UBERON:0004852;1.98e-11;18!UBERON:0006914;6.79e-10;25!UBERON:0000487;7.91e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.60e-19,203;UBERON:0000926,7.16e-16,315;UBERON:0004120,7.16e-16,315;UBERON:0006603,7.16e-16,315;UBERON:0004535,4.95e-15,109;UBERON:0001009,1.22e-14,112;UBERON:0004872,1.93e-11,83;UBERON:0004638,2.75e-11,18;UBERON:0001986,2.75e-11,18;UBERON:0004852,2.75e-11,18;UBERON:0002049,7.02e-11,78;UBERON:0007798,7.02e-11,78;UBERON:0000055,2.06e-10,68;UBERON:0006914,4.85e-10,25;UBERON:0000487,6.89e-10,22;UBERON:0003914,7.04e-09,117;UBERON:0002384,2.53e-08,371;UBERON:0007500,4.13e-08,59;UBERON:0001981,4.13e-08,59;UBERON:0004537,4.13e-08,59;UBERON:0006965,4.13e-08,59;UBERON:0002193,5.88e-08,108 | |||
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| ||
|short_description=p3@CTDSP1 | |||
}} | }} |
Latest revision as of 17:36, 24 September 2015
Short description: | p3@CTDSP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CTDSP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -121bp_to_ENST00000497677_5end |
EntrezGene: | CTDSP1 |
HGNC: | 21614 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.34e-19 | 36 |
endothelial cell of vascular tree | 9.78e-15 | 24 |
meso-epithelial cell | 6.76e-14 | 45 |
blood vessel endothelial cell | 2.75e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.75e-11 | 18 |
connective tissue cell | 2.03e-09 | 361 |
multi fate stem cell | 5.67e-09 | 427 |
lining cell | 3.08e-08 | 58 |
barrier cell | 3.08e-08 | 58 |
somatic stem cell | 4.42e-08 | 433 |
mesenchymal cell | 6.03e-08 | 354 |
stem cell | 1.03e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.60e-19 | 203 |
mesoderm | 7.16e-16 | 315 |
mesoderm-derived structure | 7.16e-16 | 315 |
presumptive mesoderm | 7.16e-16 | 315 |
cardiovascular system | 4.95e-15 | 109 |
circulatory system | 1.22e-14 | 112 |
splanchnic layer of lateral plate mesoderm | 1.93e-11 | 83 |
blood vessel endothelium | 2.75e-11 | 18 |
endothelium | 2.75e-11 | 18 |
cardiovascular system endothelium | 2.75e-11 | 18 |
vasculature | 7.02e-11 | 78 |
vascular system | 7.02e-11 | 78 |
vessel | 2.06e-10 | 68 |
squamous epithelium | 4.85e-10 | 25 |
simple squamous epithelium | 6.89e-10 | 22 |
epithelial tube | 7.04e-09 | 117 |
connective tissue | 2.53e-08 | 371 |
epithelial tube open at both ends | 4.13e-08 | 59 |
blood vessel | 4.13e-08 | 59 |
blood vasculature | 4.13e-08 | 59 |
vascular cord | 4.13e-08 | 59 |
hemolymphoid system | 5.88e-08 | 108 |