FFCP PHASE1:Hg19::chr4:111558887..111558892,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5308 | |EntrezGene=5308 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9005 | |HGNC=9005 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-379bp_to_ENST00000355080_5end | |||
|cluster_id=chr4:111558887..111558892,- | |||
|description=CAGE_peak_14_at_PITX2_5end | |||
|id=chr4:111558887..111558892,- | |||
|ontology_enrichment_celltype=CL:0002367!5.99e-16!2;CL:0002253!1.08e-15!2;CL:0002588!4.95e-15!2;CL:0002166!2.74e-10!3;CL:0000342!7.01e-09!1;CL:0002565!7.01e-09!1;CL:0002563!2.75e-08!4;CL:0002568!3.06e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0002367;3.52e-50;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002367,4.52e-50,2 | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.04e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!2.23e-17!20;UBERON:0002104!1.64e-16!21;UBERON:0005969!5.99e-16!2;UBERON:0003956!5.99e-16!2;UBERON:0000020!5.28e-15!23;UBERON:0001032!2.41e-14!24;UBERON:0004456!2.41e-14!24;UBERON:0000019!1.15e-13!19;UBERON:0000047!1.15e-13!19;UBERON:0004088!1.15e-13!19;UBERON:0003072!1.15e-13!19;UBERON:0003071!1.15e-13!19;UBERON:0004128!1.15e-13!19;UBERON:0001801!3.78e-13!14;UBERON:0001456!2.59e-12!21;UBERON:0002203!8.15e-12!6;UBERON:0001768!8.15e-12!6;UBERON:0002506!7.01e-09!1;UBERON:0001769!7.01e-09!1;UBERON:0005085!9.17e-09!29;UBERON:0001052!2.75e-08!4;UBERON:0001242!2.75e-08!4;UBERON:0001262!2.75e-08!4;UBERON:0004786!2.75e-08!4;UBERON:0004808!2.75e-08!4;UBERON:0001277!2.75e-08!4;UBERON:0001708!6.25e-08!4;UBERON:0001704!6.25e-08!4;UBERON:0003350!8.65e-07!5;UBERON:0004907!8.65e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0005969;3.52e-50;2!UBERON:0003956;3.52e-50;2!UBERON:0000019;5.37e-22;19!UBERON:0000047;5.37e-22;19!UBERON:0004088;5.37e-22;19!UBERON:0010230;5.37e-22;19!UBERON:0000966;4.66e-21;5!UBERON:0005388;4.66e-21;5!UBERON:0001802;4.66e-21;5!UBERON:0000970;5.71e-21;20!UBERON:0002104;4.86e-20;21!UBERON:0001456;4.86e-20;21!UBERON:0000020;2.02e-18;23!UBERON:0002203;8.34e-18;6!UBERON:0001768;8.34e-18;6!UBERON:0002200;8.34e-18;6!UBERON:0001032;1.03e-17;24!UBERON:0004456;1.03e-17;24!UBERON:0006876;2.27e-10;11!UBERON:0001444;8.88e-10;48!UBERON:0001801;1.93e-08;14!UBERON:0007811;3.55e-08;52!UBERON:0000033;8.24e-08;50!UBERON:0000153;3.42e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,4.52e-50,2;UBERON:0003956,4.52e-50,2;UBERON:0000019,5.71e-21,20;UBERON:0000047,5.71e-21,20;UBERON:0010312,5.71e-21,20;UBERON:0004088,5.71e-21,20;UBERON:0010230,5.71e-21,20;UBERON:0003072,5.71e-21,20;UBERON:0004128,5.71e-21,20;UBERON:0003071,5.71e-21,20;UBERON:0000970,4.86e-20,21;UBERON:0002104,4.86e-20,21;UBERON:0001456,3.41e-19,22;UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6;UBERON:0002203,9.07e-18,6;UBERON:0001768,9.07e-18,6;UBERON:0002200,9.07e-18,6;UBERON:0000020,1.03e-17,24;UBERON:0001032,1.03e-17,24;UBERON:0004456,1.03e-17,24;UBERON:0005085,5.04e-14,31;UBERON:0006876,2.37e-10,11;UBERON:0001444,2.38e-09,49;UBERON:0001801,2.00e-08,14;UBERON:0000033,2.46e-08,56;UBERON:0000153,1.20e-07,62;UBERON:0007811,1.20e-07,62;UBERON:0003056,1.20e-07,61 | |||
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|short_description=p14@PITX2 | |||
}} | }} |
Latest revision as of 17:24, 24 September 2015
Short description: | p14@PITX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PITX2_5end |
Coexpression cluster: | NA |
Association with transcript: | -379bp_to_ENST00000355080_5end |
EntrezGene: | PITX2 |
HGNC: | 9005 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trabecular meshwork cell | 4.52e-50 | 2 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 4.52e-50 | 2 |
aqueous drainage system | 4.52e-50 | 2 |
camera-type eye | 5.71e-21 | 20 |
simple eye | 5.71e-21 | 20 |
immature eye | 5.71e-21 | 20 |
ocular region | 5.71e-21 | 20 |
eyeball of camera-type eye | 5.71e-21 | 20 |
optic cup | 5.71e-21 | 20 |
optic vesicle | 5.71e-21 | 20 |
eye primordium | 5.71e-21 | 20 |
eye | 4.86e-20 | 21 |
visual system | 4.86e-20 | 21 |
face | 3.41e-19 | 22 |
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
vasculature of eye | 9.07e-18 | 6 |
uvea | 9.07e-18 | 6 |
vasculature of head | 9.07e-18 | 6 |
sense organ | 1.03e-17 | 24 |
sensory system | 1.03e-17 | 24 |
entire sense organ system | 1.03e-17 | 24 |
ectodermal placode | 5.04e-14 | 31 |
vasculature of organ | 2.37e-10 | 11 |
subdivision of head | 2.38e-09 | 49 |
anterior segment of eyeball | 2.00e-08 | 14 |
head | 2.46e-08 | 56 |
anterior region of body | 1.20e-07 | 62 |
craniocervical region | 1.20e-07 | 62 |
pre-chordal neural plate | 1.20e-07 | 61 |