FFCP PHASE1:Hg19::chr19:6590918..6590923,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:6590918..6590923,-
|short_description=p9@CD70
|description=CAGE_peak_9_at_CD70_5end
|association_with_transcript=89bp_to_AB590870,BT007211_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=970 | |EntrezGene=970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11937 | |HGNC=11937 | ||
|TSSclassifier=strong | |||
|UniProt=Q53XX4 | |UniProt=Q53XX4 | ||
|association_with_transcript=89bp_to_AB590870,BT007211_5end | |||
|cluster_id=chr19:6590918..6590923,- | |||
|coexpression_cluster_id=C3830 | |||
|description=CAGE_peak_9_at_CD70_5end | |||
|id=chr19:6590918..6590923,- | |||
|ontology_enrichment_celltype=CL:0000542!1.30e-12!53;CL:0000051!1.30e-12!53;CL:0000838!1.24e-11!52;CL:0000945!1.82e-09!24;CL:0000826!1.82e-09!24 | |||
|ontology_enrichment_celltype_v019=CL:0000785;1.19e-07;1!CL:0000819;1.19e-07;1!CL:0002379;1.19e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.06e-07,1;CL:0000819,1.44e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.02e-15;29 | |||
|ontology_enrichment_disease=DOID:14566!8.64e-15!239;DOID:162!4.86e-14!235;DOID:2531!2.98e-12!51;DOID:0060083!2.98e-12!51;DOID:0060058!4.22e-11!10;DOID:0050686!4.09e-10!137 | |||
|ontology_enrichment_disease_v019=DOID:0060058;9.64e-10;10!DOID:3620;1.19e-07;1!DOID:0060073;1.19e-07;1!DOID:8675;1.19e-07;1!DOID:3565;1.19e-07;1!DOID:12603;3.40e-07;1!DOID:225;3.40e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.97e-11,235;DOID:14566,2.12e-10,239;DOID:0060058,1.25e-09,10;DOID:305,2.89e-08,106;DOID:2531,7.02e-08,51;DOID:0060083,7.02e-08,51;DOID:3620,1.06e-07,1;DOID:3565,1.06e-07,1;DOID:0060073,1.44e-07,1;DOID:8675,1.44e-07,1;DOID:12603,5.19e-07,1;DOID:225,6.57e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.01e-17!9;UBERON:0001557!5.86e-14!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.64e-41;9!UBERON:0001557;3.64e-41;9!UBERON:0000072;6.70e-11;37!UBERON:0000065;9.12e-09;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.42e-42,9;UBERON:0001557,3.38e-19,19;UBERON:0008947,2.73e-11,38;UBERON:0003258,2.73e-11,38;UBERON:0000072,7.60e-09,47;UBERON:0000065,1.65e-07,54 | |||
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| ||
|short_description=p9@CD70 | |||
}} | }} |
Latest revision as of 17:17, 24 September 2015
Short description: | p9@CD70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CD70_5end |
Coexpression cluster: | C3830_CD4_Hep2_serous_testicular_meningioma_hairy_mesothelioma |
Association with transcript: | 89bp_to_AB590870, BT007211_5end |
EntrezGene: | CD70 |
HGNC: | 11937 |
UniProt: | Q53XX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.06e-07 | 1 |
B-1 B cell | 1.44e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.42e-42 | 9 |
upper respiratory tract | 3.38e-19 | 19 |
respiratory primordium | 2.73e-11 | 38 |
endoderm of foregut | 2.73e-11 | 38 |
segment of respiratory tract | 7.60e-09 | 47 |
respiratory tract | 1.65e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.97e-11 | 235 |
disease of cellular proliferation | 2.12e-10 | 239 |
lymphoma | 1.25e-09 | 10 |
carcinoma | 2.89e-08 | 106 |
hematologic cancer | 7.02e-08 | 51 |
immune system cancer | 7.02e-08 | 51 |
central nervous system cancer | 1.06e-07 | 1 |
meningioma | 1.06e-07 | 1 |
lymphatic system cancer | 1.44e-07 | 1 |
lymphosarcoma | 1.44e-07 | 1 |
acute leukemia | 5.19e-07 | 1 |
syndrome | 6.57e-07 | 1 |