FFCP PHASE1:Hg19::chr9:117880424..117880443,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3371 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5318 | |||
|TSSclassifier=strong | |||
|UniProt=F5H5D6 | |||
|association_with_transcript=34bp_to_ENST00000534839_5end | |||
|cluster_id=chr9:117880424..117880443,- | |||
|coexpression_cluster_id=C864 | |||
|description=CAGE_peak_1_at_TNC_5end | |||
|id=chr9:117880424..117880443,- | |||
|ontology_enrichment_celltype=CL:0000055!1.27e-20!180;CL:0000057!4.68e-11!75;CL:0002620!1.61e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.17e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.15e-11,76;CL:0002620,1.11e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.93e-18!365;UBERON:0000468!6.27e-17!659;UBERON:0003102!3.43e-14!95;UBERON:0000467!4.66e-13!625;UBERON:0000480!8.75e-13!626;UBERON:0000481!1.48e-12!347;UBERON:0000486!4.23e-11!82;UBERON:0000914!1.57e-10!83;UBERON:0002329!1.57e-10!83;UBERON:0003077!1.57e-10!83;UBERON:0003059!1.57e-10!83;UBERON:0007282!1.57e-10!83;UBERON:0009618!1.57e-10!83;UBERON:0007285!1.57e-10!83;UBERON:0002199!2.69e-10!45;UBERON:0002416!2.69e-10!45;UBERON:0000922!2.85e-10!612;UBERON:0002050!3.80e-10!605;UBERON:0005423!3.80e-10!605;UBERON:0000923!7.39e-10!604;UBERON:0005291!7.39e-10!604;UBERON:0006598!7.39e-10!604;UBERON:0002532!7.39e-10!604;UBERON:0002097!7.68e-09!40;UBERON:0004290!4.43e-08!70;UBERON:0000483!6.95e-08!309;UBERON:0005256!7.07e-08!143;UBERON:0002100!8.65e-08!216;UBERON:0000119!1.29e-07!312;UBERON:0000924!2.06e-07!173;UBERON:0006601!2.06e-07!173;UBERON:0004121!7.99e-07!169;UBERON:0000062!8.07e-07!511;UBERON:0002385!9.32e-07!63;UBERON:0001015!9.32e-07!63;UBERON:0000383!9.32e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;8.06e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.32e-14,99;UBERON:0000486,5.52e-11,83;UBERON:0002199,1.62e-09,46;UBERON:0002416,1.62e-09,46;UBERON:0007524,2.03e-08,73;UBERON:0002329,4.36e-08,71;UBERON:0003059,4.36e-08,71;UBERON:0007282,4.36e-08,71;UBERON:0004290,4.36e-08,71;UBERON:0009618,4.36e-08,71;UBERON:0002097,4.54e-08,41;UBERON:0003077,4.81e-08,72;UBERON:0007285,4.81e-08,72;UBERON:0000922,7.08e-08,592;UBERON:0004121,1.41e-07,171;UBERON:0000924,1.41e-07,171;UBERON:0006601,1.41e-07,171;UBERON:0000483,1.79e-07,306;UBERON:0007503,1.79e-07,78;UBERON:0005423,1.97e-07,581;UBERON:0000119,3.83e-07,309;UBERON:0002050,7.52e-07,564;UBERON:0002385,9.55e-07,64;UBERON:0001015,9.55e-07,64;UBERON:0000383,9.55e-07,64 | |||
|phase1_expression=221.647622710079,733.93659589829,12.8268507727334,1135.83193630803,24.1358990990735,174.467704820074,281.162864766825,62.5402674692563,7.57438321779532,138.102472313848,19.538432703228,53.5181361718922,34.8172411261559,11.8815698841645,23.529213676682,102.19342226067,92.2122627876685,81.0644200329984,72.7019870197855,544.810681989787,123.216417511529,806.51899836312,119.360406633651,254.586430635565,147.889229442678,0,0,0,0,0,8.82451902901633,46.8904824484253,103.916041978496,96.1360426433648,0,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06847408441971,1.93645405075148,8.12558919566051,0,0,0,0.612167784741805,0.641858054152187,0.639337125799041,0,0,0,0.870627715885752,7.94339314567596,3.73693349397345,0,0,0.217188844705117,19.9781835869012,1.47311054395026,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.639312809217652,474.208167928551,513.370020491151,540.712055280755,1814.04724522356,2597.17030280517,396.857162454757,344.567483656824,158.278283819013,35.560818997629,51.729930937541,57.842373074371,0.97364218096405,0.522389211897802,5.85015026283007,0,0,0,0,6.881876760849,0,0,0,0,0.208994966536811,0.516833518338658,1.42306505074684,1.33888245105868,0.402829317109147,0,1.70843440283719,1.83831540172934,0,0.0892997282840798,0,0.450445921933289,0,0,1.46561395144326,0,0,167.024021970591,51.1881110246178,3.67228483827281,62.0999058013996,56.5068142875163,16.3147455811244,63.3565688160807,93.9391162421404,109.273723948802,4.04574346019696,4.98429486657846,1.63461903113459,5.14615253992767,5.76175924479999,39.131679116244,68.0508967490099,18.2550982894224,63.6651379150673,27.0099346880659,53.7418175302197,35.3936032889666,35.3186716270965,32.4282597703067,44.3267601244034,54.6481314349745,54.6459913705611,35.496293115583,5.74894513452991,37.2022811838486,56.5535709821278,41.2825532071433,272.16612494612,79.0738513161471,119.439256830744,0.680593098960126,730.474596525046,423.057187249582,460.104157417409,514.056047592581,159.73142031958,511.158831450528,159.874379588836,937.721301932475,624.960951103928,693.435577848583,411.002797437867,2.42469085228218,1635.52919272404,269.41111066071,236.706586865441,100.495643644914,236.198140431663,93.2114935014262,1.58565817968474,1.59035721985782,9.17932148669195,14.4088866471365,12.868363394657,24.4534830580806,416.15575599731,188.469594890515,95.3130957332116,0.928735856063958,1.44375896333917,0.236613600079688,0.842923450390509,0.482022059766964,0.992645754591546,0.653638332277218,0.949082476444386,0.404493924480493,0,0,2.95262181849859,18.231430594448,9.8777762719536,4.41026134156626,0,0.982827216677626,8.27105869353966,0,0,16.8136454092555,124.347073367973,34.8445435098621,12.264534634219,31.7578366893757,17.5936484867575,7.27954349695705,15.8764476227801,41.1552937661523,34.9877908822749,2.16549671641611,5.55582615091933,0,0,0,0.246217006087397,0.702012795417713,0.891786973732369,73.112390509686,351.922558576611,141.349771950659,30.4498977189684,37.2011441297871,19.5525166374258,0,0.088048434013226,0.621984346622316,1.29707958075265,0.75745460055828,2.85740524314761,0,0,37.6359381249951,18.3032937011916,0,0,2.46688385559794,0.43596006883328,2.42016343209135,154.73824376206,28.6125156681506,76.922550482596,186.954495959164,33.2823798116371,36.5234471452242,8.5109479213967,41.8282821055276,0.57191197463259,37.983512377401,4.93944202068461,67.1016539645094,0.355391948742546,3.16780749173372,195.031276957552,131.601552248644,281.124051203944,3.64871341923571,0,2.10833939483032,28.2757329480068,24.1210065251639,336.623095896095,74.4175916271357,49.314317412092,45.1233627364537,0,0,0,0,1013.83755064763,498.435640274691,173.989982874981,128.987524307449,132.053321592205,0,0,0,37.5435964660568,9.50323990013386,7.86668568729233,59.4796663978108,216.969650377349,19.0819922191061,103.787293683544,202.536725116755,118.251902109112,88.9868413115542,382.593944756411,353.98880360007,168.380444839145,17.4263030141839,12.6963066810017,0,0,0,14.5501234294205,18.3078983461547,79.5286471457059,9.6762045049323,147.016570409964,212.459691485837,0.512556597022804,122.809739776009,20.911009748669,17.8101679733989,536.187105351833,619.690421342813,471.492002675278,86.7154896736647,440.669755120165,0.241718899183244,430.086378800546,83.6095379537939,127.214408566384,35.3256865933031,13.2435659109018,26.1695775486299,10.1660244977827,19.6087442294214,51.1487286286412,38.9485510614711,1.13733384070897,1.02056223165909,13.3867867983326,6.16909010761157,8.94123243894714,21.0709705019038,79.0116446439619,92.2494369910884,57.759686718322,0,0,2.56450125116389,4.59220503979588,4.55529752530024,17.3108899568173,125.724875195585,121.041436383503,383.035113843447,229.471266850892,22.4957501781823,316.789943843284,42.9795641749858,34.9988378375575,23.1565441774011,12.568168649588,6.52575122614028,44.4030728837886,875.006846336135,280.32321645221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| |||
|short_description=p1@TNC | |||
}} |
Latest revision as of 17:09, 24 September 2015
Short description: | p1@TNC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNC_5end |
Coexpression cluster: | C864_Chondrocyte_peripheral_Fibroblast_Adipocyte_mesenchymal_Neural_neuroectodermal |
Association with transcript: | 34bp_to_ENST00000534839_5end |
EntrezGene: | TNC |
HGNC: | 5318 |
UniProt: | F5H5D6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.15e-11 | 76 |
skin fibroblast | 1.11e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.32e-14 | 99 |
multilaminar epithelium | 5.52e-11 | 83 |
integument | 1.62e-09 | 46 |
integumental system | 1.62e-09 | 46 |
dense mesenchyme tissue | 2.03e-08 | 73 |
somite | 4.36e-08 | 71 |
presomitic mesoderm | 4.36e-08 | 71 |
presumptive segmental plate | 4.36e-08 | 71 |
dermomyotome | 4.36e-08 | 71 |
trunk paraxial mesoderm | 4.36e-08 | 71 |
skin of body | 4.54e-08 | 41 |
paraxial mesoderm | 4.81e-08 | 72 |
presumptive paraxial mesoderm | 4.81e-08 | 72 |
embryo | 7.08e-08 | 592 |
ectoderm-derived structure | 1.41e-07 | 171 |
ectoderm | 1.41e-07 | 171 |
presumptive ectoderm | 1.41e-07 | 171 |
epithelium | 1.79e-07 | 306 |
epithelial vesicle | 1.79e-07 | 78 |
developing anatomical structure | 1.97e-07 | 581 |
cell layer | 3.83e-07 | 309 |
embryonic structure | 7.52e-07 | 564 |
muscle tissue | 9.55e-07 | 64 |
musculature | 9.55e-07 | 64 |
musculature of body | 9.55e-07 | 64 |