FFCP PHASE1:Hg19::chr11:101980713..101980754,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10413 | |EntrezGene=10413 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16262 | |HGNC=16262 | ||
|TSSclassifier=strong | |||
|UniProt=E9PRV2,E3WEB6,P46937,Q86T74 | |UniProt=E9PRV2,E3WEB6,P46937,Q86T74 | ||
|association_with_transcript=-437bp_to_ENST00000282441,ENST00000526343,NM_001130145,NM_001195044,NM_006106_5end | |association_with_transcript=-437bp_to_ENST00000282441,ENST00000526343,NM_001130145,NM_001195044,NM_006106_5end | ||
|cluster_id=chr11:101980713..101980754,+ | |||
|coexpression_cluster_id=C2089 | |||
|description=CAGE_peak_8_at_YAP1_5end | |description=CAGE_peak_8_at_YAP1_5end | ||
|id=chr11:101980713..101980754,+ | |id=chr11:101980713..101980754,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.24e-15!180;CL:0000057!4.08e-12!75;CL:0000066!3.57e-10!254;CL:0002321!6.86e-09!248;CL:0000220!2.03e-08!246;CL:0000223!2.09e-07!59;CL:0002620!5.66e-07!23 | |ontology_enrichment_celltype=CL:0000055!2.24e-15!180;CL:0000057!4.08e-12!75;CL:0000066!3.57e-10!254;CL:0002321!6.86e-09!248;CL:0000220!2.03e-08!246;CL:0000223!2.09e-07!59;CL:0002620!5.66e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.30e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.63e-13,76;CL:0002620,1.72e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.10e-10!143;DOID:305!5.81e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.45e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.04e-13!169;UBERON:0000925!4.04e-13!169;UBERON:0006595!4.04e-13!169;UBERON:0001007!8.10e-13!155;UBERON:0001555!8.10e-13!155;UBERON:0007026!8.10e-13!155;UBERON:0000481!1.04e-12!347;UBERON:0003104!1.79e-12!238;UBERON:0009142!1.79e-12!238;UBERON:0002100!2.21e-12!216;UBERON:0000475!4.31e-12!365;UBERON:0000468!1.78e-11!659;UBERON:0003102!6.80e-10!95;UBERON:0005256!1.93e-09!143;UBERON:0001048!6.53e-09!168;UBERON:0000077!1.42e-08!130;UBERON:0000467!2.35e-08!625;UBERON:0000480!3.65e-08!626;UBERON:0004921!4.50e-08!129;UBERON:0004185!4.50e-08!129;UBERON:0000062!4.73e-08!511;UBERON:0001737!7.30e-08!9;UBERON:0000064!1.87e-07!219;UBERON:0004923!3.52e-07!57 | |ontology_enrichment_uberon=UBERON:0004119!4.04e-13!169;UBERON:0000925!4.04e-13!169;UBERON:0006595!4.04e-13!169;UBERON:0001007!8.10e-13!155;UBERON:0001555!8.10e-13!155;UBERON:0007026!8.10e-13!155;UBERON:0000481!1.04e-12!347;UBERON:0003104!1.79e-12!238;UBERON:0009142!1.79e-12!238;UBERON:0002100!2.21e-12!216;UBERON:0000475!4.31e-12!365;UBERON:0000468!1.78e-11!659;UBERON:0003102!6.80e-10!95;UBERON:0005256!1.93e-09!143;UBERON:0001048!6.53e-09!168;UBERON:0000077!1.42e-08!130;UBERON:0000467!2.35e-08!625;UBERON:0000480!3.65e-08!626;UBERON:0004921!4.50e-08!129;UBERON:0004185!4.50e-08!129;UBERON:0000062!4.73e-08!511;UBERON:0001737!7.30e-08!9;UBERON:0000064!1.87e-07!219;UBERON:0004923!3.52e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.01e-09;9!UBERON:0001557;2.01e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.00e-11,160;UBERON:0000925,2.00e-11,160;UBERON:0006595,2.00e-11,160;UBERON:0001007,5.36e-11,145;UBERON:0001555,5.36e-11,145;UBERON:0007026,5.36e-11,145;UBERON:0001737,2.86e-09,9;UBERON:0003102,2.08e-08,99;UBERON:0004923,2.68e-08,66 | |||
|phase1_expression=2.54349730978779,2.14100523890983,2.67813367782345,0,2.23480547213644,1.74467704820074,2.53299878168311,0.631719873426831,0.783556884599516,0.737201809504527,1.39560233594486,1.96597234917155,1.31883489114227,1.23766352960047,0.994192127183747,2.01697543935533,1.20538905604795,1.46062018077475,1.46379839637152,0.861847406537515,1.22400414746552,0.940364164434263,0.572471974262113,1.09499540058307,1.38096903554283,0,0,0,0,0,0.154816123316076,2.75826367343678,0.6024118375565,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,0.767175371061182,1.80719576192283,2.00535164254356,1.30361867064741,0,1.45990461090791,0.945348171640679,1.33037638477538,2.10803485663503,1.24430121722827,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0,1.72046919021225,0,0,0,0,0.417989933073621,0.516833518338658,0.71153252537342,0,0.402829317109147,0.760272105718513,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0,0,0,0,1.98788780678127,1.51956613997496,1.45650098894541,0.573673241497627,1.06400514659507,0,0,1.2333377420858,2.8008993185979,1.21239604862719,0.980771418680752,1.05950199351452,0,1.40592859100278,1.5608003841516,1.71141546463335,0.597794722207204,1.64408298101271,1.45685649931318,1.54495887372473,1.02077085627447,1.84251475967652,2.58314452939414,7.12801714369232,1.7308685049499,0,2.15585442544872,0.505008341862199,1.87677779807946,1.93944880838928,3.07284334616587,2.75839016219118,2.25357088359895,1.02088964844019,2.69084453533293,1.70845911054854,1.69545520927649,1.50045548042201,1.03052529238439,1.8034837803194,2.60563598864226,2.02531598689519,1.75386609290158,3.02920529092937,2.11714766877288,2.26304479546337,1.42003837006646,2.11579406278045,1.3564847384839,1.93260853163297,0.818238361772504,2.00763216772303,2.07355300420312,2.51806559810822,1.97529702878181,2.28054321033815,0.756962552626885,2.91981887260664,1.56449532329816,1.92972281457866,1.38134921352481,0.464367928031979,0.721879481669586,10.0560780033867,11.1265895451547,9.64044119533928,10.8088093277746,12.6370077573596,9.72809538355496,9.57302287937167,10.0072947213927,8.84918460976698,0,1.40241773803446,1.6462960453256,0,0,1.96565443335525,1.18157981336281,0,5.65746817298322,0.686271241194102,1.97550513735526,0,0.904760751704678,1.20364978706088,0.977424915930974,1.03993478527958,2.88662684050547,0.463721619900307,0.939269553886573,0.288732895522148,0.462985512576611,0.761016608938393,0.790204397959275,0.858486162094873,0,0,0,0.93733833986777,1.84780341018745,1.27597587518148,1.79117045405697,2.61570544662566,2.68367875415648,0,0,0,0,0.12624243342638,0.761974731506028,0.381988425558278,0,0,0.205654985406647,1.8020583470635,2.5724378936752,1.45770409648969,0.87192013766656,1.54010400223995,1.03417372606222,0,0,1.06375246633948,4.16029747645464,1.02882949704857,1.41849132023278,1.0656887160644,1.14382394926518,0.542621605391443,0,1.95441710576241,1.42156779497018,0,0.904318131178758,0.871533458600294,1.49959486773086,0,0,0,1.4377491329495,5.7430967917057,4.27910715122155,0.579125226670317,1.64381058040307,1.79060963239896,0,0,0,0,1.27047312111232,0,1.54657762555539,0,0,0,0,0,1.47229790062968,0.500170521059677,1.35632511849868,3.32753378449291,2.85486382075459,2.36553622550902,2.22568688486155,0.300946099727719,0,0,1.99267679560631,0.368738337083406,2.08520674723399,0.195801157462741,0.343143423810856,0,0,0,1.21251028578504,0,3.32629322662648,1.48864684691266,2.91577749247319,2.80660094433074,2.56278298511402,1.53512174720011,3.21707842287215,4.45254199334973,0.925258162815933,1.24293207719189,1.56041596426237,2.07701771673448,1.27831416305955,6.40555082835598,1.00253235151642,0.920809889358963,2.06666006696292,1.82091168006717,1.18011973463482,1.80479845162965,0.616122696835318,2.35304930753057,0,0.422206515571503,0,0,0.863663664408557,0,0.541892875087706,0,1.01950509218015,0.831076008928724,1.11937377361089,0,0,2.05160100093111,0.984043937099117,0,0.309123034943167,1.55668090191184,0.495056999523528,0,0,1.6068392984416,1.93341436584244,0.770243085573222,0.307007349452259,0.551346289938122,1.6113036730241,1.30515024522806,1.44885266607372,1.60257664164127,1.32227932288782,3.0750410778417,1.65896526242959,2.4277867405332,0.929691098594572,0.62962469366128,1.3940745403212,0.616067160352178,0.532306030317022,1.73986598415015,0.37064843820784,1.00187420719394,1.116475108079,1.58189712359363,0.953150969619124,0.767693373934002,2.99557291623744,1.90921948755562,0,0.899362287916574,1.92175920815238,2.12062324222236,1.2130948894399,1.58510321173008,1.26377536871694,0.48763373908959,1.94970791705028,0,1.09199929126389,1.55545975149084,1.13008116620243,1.10273068709225,0,0.876901770507525,1.15755106853338,0.655894752046633,0.202910376962704,0,0.563391205064483,1.29070216983646,1.17898849215745,0.35667105148125,0,2.74439925886963,1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| ||
|short_description=p8@YAP1 | |short_description=p8@YAP1 | ||
}} | }} |
Latest revision as of 16:19, 24 September 2015
Short description: | p8@YAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_YAP1_5end |
Coexpression cluster: | C2089_pharyngeal_epidermoid_Hep2_rectal_Prostate_gastric_Adipocyte |
Association with transcript: | -437bp_to_ENST00000282441, ENST00000526343, NM_001130145, NM_001195044, NM_006106_5end |
EntrezGene: | YAP1 |
HGNC: | 16262 |
UniProt: | E9PRV2E3WEB6P46937Q86T74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.63e-13 | 76 |
skin fibroblast | 1.72e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.00e-11 | 160 |
endoderm | 2.00e-11 | 160 |
presumptive endoderm | 2.00e-11 | 160 |
digestive system | 5.36e-11 | 145 |
digestive tract | 5.36e-11 | 145 |
primitive gut | 5.36e-11 | 145 |
larynx | 2.86e-09 | 9 |
surface structure | 2.08e-08 | 99 |
organ component layer | 2.68e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.45e-07 | 143 |