FFCP PHASE1:Hg19::chr20:19869846..19869868,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54453 | |EntrezGene=54453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18750 | |HGNC=18750 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-150bp_to_ENST00000459721_5end | |association_with_transcript=-150bp_to_ENST00000459721_5end | ||
|cluster_id=chr20:19869846..19869868,+ | |||
|description=CAGE_peak_11_at_RIN2_5end | |description=CAGE_peak_11_at_RIN2_5end | ||
|id=chr20:19869846..19869868,+ | |id=chr20:19869846..19869868,+ | ||
|ontology_enrichment_celltype=CL:0000222!6.17e-24!119;CL:0002139!6.50e-21!24;CL:0000213!3.27e-16!57;CL:0000215!3.27e-16!57;CL:0000071!5.12e-16!18;CL:0002546!5.12e-16!18;CL:0000115!5.41e-16!35;CL:0002078!1.21e-14!44;CL:0000359!6.08e-12!32;CL:0000220!1.54e-10!246;CL:0002321!3.46e-10!248;CL:0000183!4.41e-10!59;CL:0000192!8.22e-10!42;CL:0000514!8.22e-10!42;CL:0000187!3.73e-09!54;CL:1000413!5.68e-09!9;CL:0000680!1.73e-08!57;CL:0000056!1.73e-08!57;CL:0000355!1.73e-08!57;CL:0000393!4.65e-07!60;CL:0000211!4.65e-07!60 | |ontology_enrichment_celltype=CL:0000222!6.17e-24!119;CL:0002139!6.50e-21!24;CL:0000213!3.27e-16!57;CL:0000215!3.27e-16!57;CL:0000071!5.12e-16!18;CL:0002546!5.12e-16!18;CL:0000115!5.41e-16!35;CL:0002078!1.21e-14!44;CL:0000359!6.08e-12!32;CL:0000220!1.54e-10!246;CL:0002321!3.46e-10!248;CL:0000183!4.41e-10!59;CL:0000192!8.22e-10!42;CL:0000514!8.22e-10!42;CL:0000187!3.73e-09!54;CL:1000413!5.68e-09!9;CL:0000680!1.73e-08!57;CL:0000056!1.73e-08!57;CL:0000355!1.73e-08!57;CL:0000393!4.65e-07!60;CL:0000211!4.65e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.58e-38;24!CL:0000071;4.34e-29;18!CL:0000115;5.25e-27;36!CL:0002078;5.12e-18;45!CL:0000213;5.75e-18;58!CL:0000215;5.75e-18;58!CL:0000359;1.20e-16;32!CL:1000413;1.11e-15;9!CL:0002539;6.73e-12;10!CL:0002544;5.00e-11;6!CL:0002138;6.08e-11;6!CL:0002543;4.85e-10;6!CL:0000192;1.34e-09;43!CL:0000076;3.76e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.26e-38,24;CL:0000222,1.58e-34,121;CL:0000115,1.79e-32,36;CL:0000213,2.13e-29,58;CL:0000215,2.13e-29,58;CL:0000071,3.24e-29,18;CL:0002546,3.24e-29,18;CL:0002078,7.39e-26,45;CL:0000359,5.94e-18,32;CL:0002321,1.01e-15,250;CL:1000413,1.02e-15,9;CL:0000192,5.51e-13,43;CL:0000514,5.51e-13,43;CL:0000076,3.05e-12,63;CL:0002539,5.47e-12,10;CL:0002544,4.73e-11,6;CL:0005020,6.52e-11,6;CL:0002138,6.52e-11,6;CL:0005022,6.52e-11,6;CL:0002543,3.92e-10,6;CL:0000187,8.77e-09,55;CL:0000680,5.04e-08,58;CL:0000056,5.04e-08,58;CL:0000355,5.04e-08,58;CL:0000393,2.39e-07,61;CL:0000211,2.39e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002546;4.34e-29;18!CL:0005022;6.08e-11;6!CL:0000222;1.16e-09;121!CL:0000514;1.34e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!2.89e-08!14 | |ontology_enrichment_disease=DOID:2394!2.89e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.14e-11;14!DOID:193;1.57e-08;29!DOID:120;4.22e-08;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.09e-12,14;DOID:193,1.45e-08,29;DOID:120,3.71e-08,27 | |||
|ontology_enrichment_uberon=UBERON:0000055!2.35e-31!69;UBERON:0002049!1.13e-30!79;UBERON:0007798!1.13e-30!79;UBERON:0001981!8.01e-28!60;UBERON:0007500!8.01e-28!60;UBERON:0004537!8.01e-28!60;UBERON:0006965!8.01e-28!60;UBERON:0004872!2.02e-26!84;UBERON:0004535!3.81e-22!110;UBERON:0001009!2.31e-21!113;UBERON:0001637!2.28e-20!42;UBERON:0003509!2.28e-20!42;UBERON:0004572!2.28e-20!42;UBERON:0003914!1.05e-19!118;UBERON:0004111!1.46e-19!241;UBERON:0000477!1.95e-18!286;UBERON:0004573!4.43e-16!33;UBERON:0004571!4.43e-16!33;UBERON:0001986!5.12e-16!18;UBERON:0004638!5.12e-16!18;UBERON:0004852!5.12e-16!18;UBERON:0000025!6.39e-16!194;UBERON:0000490!3.20e-15!138;UBERON:0000487!1.68e-14!22;UBERON:0000119!2.44e-14!312;UBERON:0006914!3.12e-14!25;UBERON:0000483!2.90e-13!309;UBERON:0000947!6.43e-12!21;UBERON:0010191!6.43e-12!21;UBERON:0003915!5.68e-09!9;UBERON:0004700!5.68e-09!9;UBERON:0001917!5.68e-09!9;UBERON:0002100!7.25e-09!216;UBERON:0000481!1.28e-08!347;UBERON:0000467!3.48e-08!625;UBERON:0000480!4.56e-08!626;UBERON:0002385!8.36e-08!63;UBERON:0001015!8.36e-08!63;UBERON:0000383!8.36e-08!63;UBERON:0001134!1.17e-07!61;UBERON:0002036!1.17e-07!61;UBERON:0003082!1.17e-07!61;UBERON:0003104!2.00e-07!238;UBERON:0009142!2.00e-07!238;UBERON:0005256!3.77e-07!143;UBERON:0004290!6.35e-07!70 | |ontology_enrichment_uberon=UBERON:0000055!2.35e-31!69;UBERON:0002049!1.13e-30!79;UBERON:0007798!1.13e-30!79;UBERON:0001981!8.01e-28!60;UBERON:0007500!8.01e-28!60;UBERON:0004537!8.01e-28!60;UBERON:0006965!8.01e-28!60;UBERON:0004872!2.02e-26!84;UBERON:0004535!3.81e-22!110;UBERON:0001009!2.31e-21!113;UBERON:0001637!2.28e-20!42;UBERON:0003509!2.28e-20!42;UBERON:0004572!2.28e-20!42;UBERON:0003914!1.05e-19!118;UBERON:0004111!1.46e-19!241;UBERON:0000477!1.95e-18!286;UBERON:0004573!4.43e-16!33;UBERON:0004571!4.43e-16!33;UBERON:0001986!5.12e-16!18;UBERON:0004638!5.12e-16!18;UBERON:0004852!5.12e-16!18;UBERON:0000025!6.39e-16!194;UBERON:0000490!3.20e-15!138;UBERON:0000487!1.68e-14!22;UBERON:0000119!2.44e-14!312;UBERON:0006914!3.12e-14!25;UBERON:0000483!2.90e-13!309;UBERON:0000947!6.43e-12!21;UBERON:0010191!6.43e-12!21;UBERON:0003915!5.68e-09!9;UBERON:0004700!5.68e-09!9;UBERON:0001917!5.68e-09!9;UBERON:0002100!7.25e-09!216;UBERON:0000481!1.28e-08!347;UBERON:0000467!3.48e-08!625;UBERON:0000480!4.56e-08!626;UBERON:0002385!8.36e-08!63;UBERON:0001015!8.36e-08!63;UBERON:0000383!8.36e-08!63;UBERON:0001134!1.17e-07!61;UBERON:0002036!1.17e-07!61;UBERON:0003082!1.17e-07!61;UBERON:0003104!2.00e-07!238;UBERON:0009142!2.00e-07!238;UBERON:0005256!3.77e-07!143;UBERON:0004290!6.35e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.34e-29;18!UBERON:0001986;4.34e-29;18!UBERON:0004852;4.34e-29;18!UBERON:0000487;2.16e-25;22!UBERON:0004573;4.09e-25;33!UBERON:0004571;4.09e-25;33!UBERON:0000055;1.40e-24;65!UBERON:0001637;2.26e-24;42!UBERON:0003509;2.26e-24;42!UBERON:0004572;2.26e-24;42!UBERON:0007500;8.81e-22;56!UBERON:0001981;8.81e-22;56!UBERON:0004537;8.81e-22;56!UBERON:0006914;1.44e-21;25!UBERON:0000947;5.40e-19;21!UBERON:0010191;5.40e-19;21!UBERON:0002049;6.27e-18;75!UBERON:0007798;6.27e-18;75!UBERON:0000490;9.22e-17;33!UBERON:0003915;1.11e-15;9!UBERON:0004700;1.11e-15;9!UBERON:0001917;1.11e-15;9!UBERON:0003914;1.29e-15;74!UBERON:0004237;6.73e-12;10!UBERON:0004695;6.73e-12;10!UBERON:0002111;6.73e-12;10!UBERON:0004178;6.73e-12;10!UBERON:0001135;4.25e-09;15!UBERON:0000025;4.31e-09;93!UBERON:0004535;9.04e-09;109!UBERON:0001009;1.21e-08;112!UBERON:0000992;1.40e-08;13!UBERON:0002118;2.36e-08;5!UBERON:0001473;6.38e-08;8!UBERON:0004536;6.38e-08;8!UBERON:0006558;6.38e-08;8!UBERON:0010260;3.56e-07;9 | |||
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| ||
|short_description=p11@RIN2 | |short_description=p11@RIN2 | ||
}} | }} |
Latest revision as of 16:08, 24 September 2015
Short description: | p11@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -150bp_to_ENST00000459721_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.26e-38 | 24 |
mesodermal cell | 1.58e-34 | 121 |
endothelial cell | 1.79e-32 | 36 |
lining cell | 2.13e-29 | 58 |
barrier cell | 2.13e-29 | 58 |
blood vessel endothelial cell | 3.24e-29 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.24e-29 | 18 |
meso-epithelial cell | 7.39e-26 | 45 |
vascular associated smooth muscle cell | 5.94e-18 | 32 |
embryonic cell | 1.01e-15 | 250 |
endothelial cell of artery | 1.02e-15 | 9 |
smooth muscle cell | 5.51e-13 | 43 |
smooth muscle myoblast | 5.51e-13 | 43 |
squamous epithelial cell | 3.05e-12 | 63 |
aortic smooth muscle cell | 5.47e-12 | 10 |
aortic endothelial cell | 4.73e-11 | 6 |
lymphangioblast | 6.52e-11 | 6 |
endothelial cell of lymphatic vessel | 6.52e-11 | 6 |
vascular lymphangioblast | 6.52e-11 | 6 |
vein endothelial cell | 3.92e-10 | 6 |
muscle cell | 8.77e-09 | 55 |
muscle precursor cell | 5.04e-08 | 58 |
myoblast | 5.04e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.04e-08 | 58 |
electrically responsive cell | 2.39e-07 | 61 |
electrically active cell | 2.39e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.09e-12 | 14 |
reproductive organ cancer | 1.45e-08 | 29 |
female reproductive organ cancer | 3.71e-08 | 27 |