FFCP PHASE1:Hg19::chr20:19867150..19867175,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54453 | |EntrezGene=54453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18750 | |HGNC=18750 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WYP3 | |UniProt=Q8WYP3 | ||
|association_with_transcript=0bp_to_ENST00000255006,NM_001242581_5end | |association_with_transcript=0bp_to_ENST00000255006,NM_001242581_5end | ||
|cluster_id=chr20:19867150..19867175,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_7_at_RIN2_5end | |description=CAGE_peak_7_at_RIN2_5end | ||
|id=chr20:19867150..19867175,+ | |id=chr20:19867150..19867175,+ | ||
|ontology_enrichment_celltype=CL:0002139!5.18e-21!24;CL:0000115!4.39e-20!35;CL:0000071!4.75e-16!18;CL:0002546!4.75e-16!18;CL:0002078!1.29e-14!44;CL:0000222!9.27e-10!119;CL:0000213!2.03e-09!57;CL:0000215!2.03e-09!57;CL:1000413!7.21e-09!9;CL:0000359!4.00e-08!32 | |ontology_enrichment_celltype=CL:0002139!5.18e-21!24;CL:0000115!4.39e-20!35;CL:0000071!4.75e-16!18;CL:0002546!4.75e-16!18;CL:0002078!1.29e-14!44;CL:0000222!9.27e-10!119;CL:0000213!2.03e-09!57;CL:0000215!2.03e-09!57;CL:1000413!7.21e-09!9;CL:0000359!4.00e-08!32 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.16e-29;24!CL:0000115;2.14e-23;36!CL:0000071;5.40e-22;18!CL:0002078;6.16e-14;45!CL:1000413;7.35e-12;9!CL:0000359;2.35e-10;32!CL:0000213;6.03e-09;58!CL:0000215;6.03e-09;58!CL:0002138;1.47e-08;6!CL:0002544;1.72e-08;6!CL:0002539;2.31e-08;10!CL:0002543;3.60e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.46e-29,24;CL:0000115,1.60e-27,36;CL:0000071,5.59e-22,18;CL:0002546,5.59e-22,18;CL:0002078,5.95e-21,45;CL:0000222,2.18e-15,121;CL:0000213,2.00e-13,58;CL:0000215,2.00e-13,58;CL:1000413,7.41e-12,9;CL:0000359,8.83e-11,32;CL:0005020,1.50e-08,6;CL:0002138,1.50e-08,6;CL:0005022,1.50e-08,6;CL:0002539,1.63e-08,10;CL:0002544,1.72e-08,6;CL:0002543,3.66e-08,6;CL:0000192,5.42e-07,43;CL:0000514,5.42e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002546;5.40e-22;18!CL:0005022;1.47e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!2.21e-37!241;UBERON:0000025!3.18e-33!194;UBERON:0000477!1.23e-31!286;UBERON:0000055!3.16e-31!69;UBERON:0001981!4.40e-29!60;UBERON:0007500!4.40e-29!60;UBERON:0004537!4.40e-29!60;UBERON:0006965!4.40e-29!60;UBERON:0004872!5.97e-29!84;UBERON:0007023!1.62e-26!115;UBERON:0002049!3.46e-25!79;UBERON:0007798!3.46e-25!79;UBERON:0000119!1.67e-24!312;UBERON:0000483!1.74e-24!309;UBERON:0003914!1.83e-23!118;UBERON:0001009!2.18e-20!113;UBERON:0001637!1.03e-19!42;UBERON:0003509!1.03e-19!42;UBERON:0004572!1.03e-19!42;UBERON:0004535!1.06e-18!110;UBERON:0001986!4.75e-16!18;UBERON:0004638!4.75e-16!18;UBERON:0004852!4.75e-16!18;UBERON:0004573!1.01e-15!33;UBERON:0004571!1.01e-15!33;UBERON:0000490!1.10e-15!138;UBERON:0000467!1.58e-15!625;UBERON:0000480!2.35e-15!626;UBERON:0000487!5.66e-15!22;UBERON:0000468!2.17e-14!659;UBERON:0000481!1.10e-12!347;UBERON:0000947!5.28e-12!21;UBERON:0010191!5.28e-12!21;UBERON:0006914!6.20e-12!25;UBERON:0000922!2.77e-11!612;UBERON:0002050!6.42e-11!605;UBERON:0005423!6.42e-11!605;UBERON:0000923!1.44e-10!604;UBERON:0005291!1.44e-10!604;UBERON:0006598!1.44e-10!604;UBERON:0002532!1.44e-10!604;UBERON:0001049!4.39e-10!57;UBERON:0005068!4.39e-10!57;UBERON:0006241!4.39e-10!57;UBERON:0007135!4.39e-10!57;UBERON:0000475!1.43e-09!365;UBERON:0003915!7.21e-09!9;UBERON:0004700!7.21e-09!9;UBERON:0001917!7.21e-09!9;UBERON:0003080!4.44e-08!42;UBERON:0003075!6.79e-08!86;UBERON:0007284!6.79e-08!86;UBERON:0002780!1.52e-07!41;UBERON:0001890!1.52e-07!41;UBERON:0006240!1.52e-07!41;UBERON:0002100!2.47e-07!216;UBERON:0002616!3.17e-07!59;UBERON:0002346!3.67e-07!90 | |ontology_enrichment_uberon=UBERON:0004111!2.21e-37!241;UBERON:0000025!3.18e-33!194;UBERON:0000477!1.23e-31!286;UBERON:0000055!3.16e-31!69;UBERON:0001981!4.40e-29!60;UBERON:0007500!4.40e-29!60;UBERON:0004537!4.40e-29!60;UBERON:0006965!4.40e-29!60;UBERON:0004872!5.97e-29!84;UBERON:0007023!1.62e-26!115;UBERON:0002049!3.46e-25!79;UBERON:0007798!3.46e-25!79;UBERON:0000119!1.67e-24!312;UBERON:0000483!1.74e-24!309;UBERON:0003914!1.83e-23!118;UBERON:0001009!2.18e-20!113;UBERON:0001637!1.03e-19!42;UBERON:0003509!1.03e-19!42;UBERON:0004572!1.03e-19!42;UBERON:0004535!1.06e-18!110;UBERON:0001986!4.75e-16!18;UBERON:0004638!4.75e-16!18;UBERON:0004852!4.75e-16!18;UBERON:0004573!1.01e-15!33;UBERON:0004571!1.01e-15!33;UBERON:0000490!1.10e-15!138;UBERON:0000467!1.58e-15!625;UBERON:0000480!2.35e-15!626;UBERON:0000487!5.66e-15!22;UBERON:0000468!2.17e-14!659;UBERON:0000481!1.10e-12!347;UBERON:0000947!5.28e-12!21;UBERON:0010191!5.28e-12!21;UBERON:0006914!6.20e-12!25;UBERON:0000922!2.77e-11!612;UBERON:0002050!6.42e-11!605;UBERON:0005423!6.42e-11!605;UBERON:0000923!1.44e-10!604;UBERON:0005291!1.44e-10!604;UBERON:0006598!1.44e-10!604;UBERON:0002532!1.44e-10!604;UBERON:0001049!4.39e-10!57;UBERON:0005068!4.39e-10!57;UBERON:0006241!4.39e-10!57;UBERON:0007135!4.39e-10!57;UBERON:0000475!1.43e-09!365;UBERON:0003915!7.21e-09!9;UBERON:0004700!7.21e-09!9;UBERON:0001917!7.21e-09!9;UBERON:0003080!4.44e-08!42;UBERON:0003075!6.79e-08!86;UBERON:0007284!6.79e-08!86;UBERON:0002780!1.52e-07!41;UBERON:0001890!1.52e-07!41;UBERON:0006240!1.52e-07!41;UBERON:0002100!2.47e-07!216;UBERON:0002616!3.17e-07!59;UBERON:0002346!3.67e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.40e-22;18!UBERON:0001986;5.40e-22;18!UBERON:0004852;5.40e-22;18!UBERON:0000055;1.32e-19;65!UBERON:0000487;3.24e-18;22!UBERON:0001637;3.45e-18;42!UBERON:0003509;3.45e-18;42!UBERON:0004572;3.45e-18;42!UBERON:0007500;3.81e-18;56!UBERON:0001981;3.81e-18;56!UBERON:0004537;3.81e-18;56!UBERON:0004573;4.91e-17;33!UBERON:0004571;4.91e-17;33!UBERON:0006914;4.01e-15;25!UBERON:0000947;1.94e-14;21!UBERON:0010191;1.94e-14;21!UBERON:0002049;3.51e-12;75!UBERON:0007798;3.51e-12;75!UBERON:0003914;5.81e-12;74!UBERON:0003915;7.35e-12;9!UBERON:0004700;7.35e-12;9!UBERON:0001917;7.35e-12;9!UBERON:0000490;4.51e-10;33!UBERON:0001009;4.80e-09;112!UBERON:0007100;1.60e-08;25!UBERON:0004237;2.31e-08;10!UBERON:0004695;2.31e-08;10!UBERON:0002111;2.31e-08;10!UBERON:0004178;2.31e-08;10!UBERON:0004535;8.08e-08;109!UBERON:0000025;1.63e-07;93!UBERON:0001135;8.68e-07;15 | |||
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| ||
|short_description=p7@RIN2 | |short_description=p7@RIN2 | ||
}} | }} |
Latest revision as of 16:04, 24 September 2015
Short description: | p7@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RIN2_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000255006, NM_001242581_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | Q8WYP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.46e-29 | 24 |
endothelial cell | 1.60e-27 | 36 |
blood vessel endothelial cell | 5.59e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.59e-22 | 18 |
meso-epithelial cell | 5.95e-21 | 45 |
mesodermal cell | 2.18e-15 | 121 |
lining cell | 2.00e-13 | 58 |
barrier cell | 2.00e-13 | 58 |
endothelial cell of artery | 7.41e-12 | 9 |
vascular associated smooth muscle cell | 8.83e-11 | 32 |
lymphangioblast | 1.50e-08 | 6 |
endothelial cell of lymphatic vessel | 1.50e-08 | 6 |
vascular lymphangioblast | 1.50e-08 | 6 |
aortic smooth muscle cell | 1.63e-08 | 10 |
aortic endothelial cell | 1.72e-08 | 6 |
vein endothelial cell | 3.66e-08 | 6 |
smooth muscle cell | 5.42e-07 | 43 |
smooth muscle myoblast | 5.42e-07 | 43 |