FFCP PHASE1:Hg19::chr12:70760636..70760646,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27345 | |EntrezGene=27345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6289 | |HGNC=6289 | ||
|TSSclassifier=strong | |||
|UniProt=Q86W47 | |UniProt=Q86W47 | ||
|association_with_transcript=121bp_to_AF207992_5end | |association_with_transcript=121bp_to_AF207992_5end | ||
|cluster_id=chr12:70760636..70760646,+ | |||
|description=CAGE_peak_10_at_KCNMB4_5end | |description=CAGE_peak_10_at_KCNMB4_5end | ||
|id=chr12:70760636..70760646,+ | |id=chr12:70760636..70760646,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000138;5.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,5.54e-08,6;CL:0000138,5.54e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.81e-40;1!UBERON:0006215;1.71e-14;3!UBERON:0003056;1.71e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;6.62e-41;1!DOID:4549;6.62e-41;1!DOID:5861;6.62e-41;1!DOID:6496;6.62e-41;1!DOID:201;5.54e-08;6!DOID:0060100;5.54e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.62e-41,1;DOID:4549,6.62e-41,1;DOID:5861,6.62e-41,1;DOID:6496,6.62e-41,1;DOID:201,5.54e-08,6;DOID:0060100,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.15e-25!57;UBERON:0005068!3.15e-25!57;UBERON:0006241!3.15e-25!57;UBERON:0007135!3.15e-25!57;UBERON:0002616!3.83e-24!59;UBERON:0000955!5.51e-23!69;UBERON:0006238!5.51e-23!69;UBERON:0005743!6.74e-22!86;UBERON:0001017!1.46e-21!82;UBERON:0001893!2.44e-21!34;UBERON:0002780!3.04e-21!41;UBERON:0001890!3.04e-21!41;UBERON:0006240!3.04e-21!41;UBERON:0000073!1.00e-20!94;UBERON:0001016!1.00e-20!94;UBERON:0003080!1.27e-20!42;UBERON:0007023!7.03e-20!115;UBERON:0002791!1.40e-19!33;UBERON:0001869!1.01e-17!32;UBERON:0003075!2.43e-17!86;UBERON:0007284!2.43e-17!86;UBERON:0002020!2.00e-16!34;UBERON:0003528!2.00e-16!34;UBERON:0002346!3.01e-16!90;UBERON:0002619!3.35e-15!22;UBERON:0003056!3.19e-14!61;UBERON:0001950!4.26e-14!20;UBERON:0000956!4.11e-13!25;UBERON:0000203!4.11e-13!25;UBERON:0000200!7.46e-12!6;UBERON:0000153!6.79e-11!129;UBERON:0007811!6.79e-11!129;UBERON:0000033!7.36e-11!123;UBERON:0004121!1.81e-10!169;UBERON:0000924!4.91e-10!173;UBERON:0006601!4.91e-10!173;UBERON:0000025!1.14e-09!194;UBERON:0004732!1.36e-09!13;UBERON:0002771!2.91e-09!3;UBERON:0004733!1.25e-07!12;UBERON:0002028!1.25e-07!12;UBERON:0007277!1.25e-07!12;UBERON:0005162!2.87e-07!2;UBERON:0000122!2.87e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.81e-40;1!UBERON:0001785;1.81e-40;1!UBERON:0002464;1.81e-40;1!UBERON:0004904;1.81e-40;1!UBERON:0001021;1.81e-40;1!UBERON:0003714;5.15e-21;2!UBERON:0005162;5.15e-21;2!UBERON:0000122;5.15e-21;2!UBERON:0002418;1.22e-14;3!UBERON:0004755;1.22e-14;3!UBERON:0004732;3.43e-13;13!UBERON:0002021;3.10e-09;5!UBERON:0002037;6.55e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.21e-40,1;UBERON:0001785,2.21e-40,1;UBERON:0002464,2.21e-40,1;UBERON:0004904,2.21e-40,1;UBERON:0001021,2.21e-40,1;UBERON:0003902,2.21e-40,1;UBERON:0005425,2.21e-40,1;UBERON:0003714,5.70e-21,2;UBERON:0005162,5.70e-21,2;UBERON:0000122,5.70e-21,2;UBERON:0002418,1.22e-14,3;UBERON:0004755,1.22e-14,3;UBERON:0004732,3.43e-13,13;UBERON:0001781,3.42e-11,4;UBERON:0002021,3.49e-09,5;UBERON:0002037,6.34e-08,6;UBERON:0006215,6.34e-08,6;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6 | |||
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| ||
|short_description=p10@KCNMB4 | |short_description=p10@KCNMB4 | ||
}} | }} |
Latest revision as of 15:40, 24 September 2015
Short description: | p10@KCNMB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_KCNMB4_5end |
Coexpression cluster: | NA |
Association with transcript: | 121bp_to_AF207992_5end |
EntrezGene: | KCNMB4 |
HGNC: | 6289 |
UniProt: | Q86W47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 5.54e-08 | 6 |
chondrocyte | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.21e-40 | 1 |
cranial nerve | 2.21e-40 | 1 |
nerve trunk | 2.21e-40 | 1 |
nerve connecting eye with brain | 2.21e-40 | 1 |
nerve | 2.21e-40 | 1 |
retinal neural layer | 2.21e-40 | 1 |
presumptive neural retina | 2.21e-40 | 1 |
neural tissue | 5.70e-21 | 2 |
multi cell component structure | 5.70e-21 | 2 |
neuron projection bundle | 5.70e-21 | 2 |
cartilage tissue | 1.22e-14 | 3 |
skeletal tissue | 1.22e-14 | 3 |
segmental subdivision of nervous system | 3.43e-13 | 13 |
layer of retina | 3.42e-11 | 4 |
occipital lobe | 3.49e-09 | 5 |
cerebellum | 6.34e-08 | 6 |
rhombic lip | 6.34e-08 | 6 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.62e-41 | 1 |
extraosseous chondrosarcoma | 6.62e-41 | 1 |
myxoid chondrosarcoma | 6.62e-41 | 1 |
extraskeletal myxoid chondrosarcoma | 6.62e-41 | 1 |
connective tissue cancer | 5.54e-08 | 6 |
musculoskeletal system cancer | 5.54e-08 | 6 |