FFCP PHASE1:Hg19::chr2:218843537..218843559,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7145 | |EntrezGene=7145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11973 | |HGNC=11973 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002vgv.1_5end | |association_with_transcript=0bp_to_uc002vgv.1_5end | ||
|cluster_id=chr2:218843537..218843559,- | |||
|coexpression_cluster_id=C1040 | |||
|description=CAGE_peak_4_at_TNS1_5end | |description=CAGE_peak_4_at_TNS1_5end | ||
|id=chr2:218843537..218843559,- | |id=chr2:218843537..218843559,- | ||
|ontology_enrichment_celltype=CL:0002139!2.24e-08!24;CL:0002078!3.70e-08!44;CL:0000075!2.22e-07!27;CL:0000213!2.85e-07!57;CL:0000215!2.85e-07!57;CL:0000115!3.44e-07!35 | |ontology_enrichment_celltype=CL:0002139!2.24e-08!24;CL:0002078!3.70e-08!44;CL:0000075!2.22e-07!27;CL:0000213!2.85e-07!57;CL:0000215!2.85e-07!57;CL:0000115!3.44e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.42e-09;24!CL:0000115;8.02e-08;36!CL:0000071;3.86e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.28e-09,24;CL:0002078,1.99e-09,45;CL:0000115,7.54e-09,36;CL:0000213,4.52e-08,58;CL:0000215,4.52e-08,58;CL:0000071,2.69e-07,18;CL:0002546,2.69e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;3.86e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0007023;2.85e-11;114!UBERON:0004638;3.86e-07;18!UBERON:0001986;3.86e-07;18!UBERON:0004852;3.86e-07;18!UBERON:0000487;4.75e-07;22!UBERON:0000489;7.99e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.70e-41,114;UBERON:0004111,4.42e-14,240;UBERON:0003075,1.05e-13,82;UBERON:0007284,1.05e-13,82;UBERON:0002346,2.36e-12,86;UBERON:0000025,3.53e-12,192;UBERON:0001049,1.53e-10,56;UBERON:0005068,1.53e-10,56;UBERON:0006241,1.53e-10,56;UBERON:0007135,1.53e-10,56;UBERON:0010314,7.33e-10,132;UBERON:0000483,1.78e-09,306;UBERON:0000073,2.79e-09,53;UBERON:0002616,2.79e-09,53;UBERON:0003056,3.07e-09,61;UBERON:0000119,4.19e-09,309;UBERON:0003103,4.57e-09,68;UBERON:0010371,2.15e-08,104;UBERON:0000489,2.59e-08,31;UBERON:0001017,1.56e-07,81;UBERON:0011216,2.06e-07,223;UBERON:0004638,2.69e-07,18;UBERON:0001986,2.69e-07,18;UBERON:0004852,2.69e-07,18;UBERON:0006555,3.29e-07,16;UBERON:0004819,3.29e-07,16;UBERON:0000487,3.54e-07,22;UBERON:0005172,4.02e-07,54;UBERON:0005173,4.02e-07,54;UBERON:0002780,5.99e-07,41;UBERON:0001890,5.99e-07,41;UBERON:0003080,5.99e-07,41;UBERON:0006240,5.99e-07,41 | |||
|phase1_expression=0.363356758541113,0,0.986680828671798,0,1.78784437770915,1.74467704820074,0,0,0.261185628199839,2.45733936501509,2.79120467188971,1.31064823278103,1.58260186937072,0.247532705920093,0,0,0,0,0,1.96993692922861,1.22400414746552,1.88072832886853,1.43117993565528,1.23186982565596,1.38096903554283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,0,1.00267582127178,0.289693037921647,0.795285947051099,1.94653948121054,2.6469748805939,2.21729397462564,2.81071314218003,16.0449367484698,0,0,0,0,0,0,0,0,4.57153536943422,4.30117297553062,5.55424802572151,2.26123176769604,2.51699661725944,1.92582629358047,4.80688423034664,1.55050055501597,1.06729878806013,1.00416183829401,4.02829317109147,0,3.41686880567437,0.367663080345869,4.86085168729056,5.44728342532887,7.18493992403743,5.51796254368279,0,0.949265659568129,1.83201743930407,0,0,0,0,0,0,0,0,1.12135520028461,0,1.97334038733728,0.311211035399766,0.67355336034844,0.653847612453835,2.8757911252537,0.576175924479999,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0.494533858557114,1.82032272387605,0.718618141816238,0.168336113954066,0.125118519871964,0,0.877955241761676,0.30648779579902,0.45071417671979,0.113432183160021,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,1.21973706129595,0.397589304964456,0.580969714347592,1.0366105501537,1.7662459561294,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69077727312324,12.6217596423101,6.173610169971,11.7606969108434,0,0,2.95394953340702,0,1.35287282397425,0.171567810298526,0,0,0,0.462942225792648,0,0,1.44331342025273,1.73895607462615,2.93521735589554,2.30986316417718,1.85194205030644,3.42457474022277,0.790204397959275,0.858486162094873,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0.380987365753014,3.4378958300245,3.51652341630141,3.4214489204541,0.822619941626588,0.300343057843917,14.5771480641595,0.224262168690721,0,0.1466765716419,1.16344544182,0,0,0.531876233169741,2.08014873822732,0.257207374262142,0,0,0.714889968290738,0,1.64648067356154,0,0.710783897485092,0.791951872933429,0.904318131178758,6.97226766880235,4.59875759437462,0,0,0,0.479249710983165,1.14861935834114,0,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0,0,0,0,1.47229790062968,1.50051156317903,0.542530047399471,0.415941723061614,0.356857977594324,1.10391690523754,2.10854546986884,3.61135319673263,2.27407504055985,0,0,4.05612170791747,0,1.95801157462741,1.71571711905428,0,0,0,0.909382714338778,0,1.20956117331872,0.744323423456331,0.306923946576125,0,0.128139149255701,0.511707249066704,1.12597744800525,0,0,0,0,0,0,0.725156697549733,0,0,1.14814448164607,0.182091168006717,0.786746489756545,3.15839729035188,2.15642943892361,6.27479815341484,2.92278449306521,1.26661954671451,4.54933536283586,0.680374821106063,4.96606607034921,0,4.6060894382455,14.5490034417907,1.78413391131527,0.831076008928724,3.35812132083267,0,0,1.02580050046556,3.28014645699706,1.62689197332152,12.5710034210221,0,0.082509499920588,0,0,3.21367859688319,0.48335359146061,0,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.340906509664404,1.24644849905432,0.165284915360978,0.960950336825531,0.510450849978337,0.30347334256665,0,0,0,0,0,0,0,0,0.372158369359667,0,2.2875623270859,0,0,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0,0,0,0.975267478179181,0,0,0.818999468447914,0.707027159768564,0,0,0,0,0.578775534266688,0,0.608731130888112,0.92947049429925,0,0.430234056612155,0.589494246078727,0.7133421029625,0,0,0.329294892959902,0,0,0.192444225451024,0,1.08890984861323,14.4040015188472,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8416052661202,0,0,0,0.23874448473769,0.890894042497916,0,1.9882952955326,2.11004124615769,0.445234820091624,0,1.26675244876796,47.8195171802567,14.6430475231508,0,0,0,0,0,0,0,72.0096861149615,0,0,0.969332746095218,1.20598527610407,0,2.08342208868187,0,14.4999915086959,0.1137934482855,0,1.41832609060762,0,0,0.347249989866585,0,1.92954301800653,0,1.76926815889959,0.295547618953547,2.63262476584767,0,0,67.0236751568072,0,0,0,1.08647371922008,0.957003479195758,1.19076871422421,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,41.8010011052972,37.8598376074292,31.7735675365485,0,0,0,3.37005664903385,7.2231988256891,0.234264445725339,0,0,0,28.4100770051561,13.308978765353,0.30607276163049,12.1318232886697,0.150323419414493,0.414752765588989,0,0,0,0,0,0,0,0,0,21.1419268572856,0,0,0,0,36.3708811831573,0,9.7171718535629,0,0,1.13959432720582,4.30213042016567,0,43.9713169163066,2.79733453414982,0.288180834308212,0,0,0,0,0,0.135904206073614,0.313808538937,0.101998217636322,0,0,2.19048606227189,0,3.86788897277961,0,13.9641200636127,46.7487264983835,12.92171444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| ||
|short_description=p4@TNS1 | |short_description=p4@TNS1 | ||
}} | }} |
Latest revision as of 15:26, 24 September 2015
Short description: | p4@TNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TNS1_5end |
Coexpression cluster: | C1040_smooth_aorta_heart_bladder_uterus_penis_cervix |
Association with transcript: | 0bp_to_uc002vgv.1_5end |
EntrezGene: | TNS1 |
HGNC: | 11973 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.28e-09 | 24 |
meso-epithelial cell | 1.99e-09 | 45 |
endothelial cell | 7.54e-09 | 36 |
lining cell | 4.52e-08 | 58 |
barrier cell | 4.52e-08 | 58 |
blood vessel endothelial cell | 2.69e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.69e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.70e-41 | 114 |
anatomical conduit | 4.42e-14 | 240 |
neural plate | 1.05e-13 | 82 |
presumptive neural plate | 1.05e-13 | 82 |
neurectoderm | 2.36e-12 | 86 |
tube | 3.53e-12 | 192 |
neural tube | 1.53e-10 | 56 |
neural rod | 1.53e-10 | 56 |
future spinal cord | 1.53e-10 | 56 |
neural keel | 1.53e-10 | 56 |
structure with developmental contribution from neural crest | 7.33e-10 | 132 |
epithelium | 1.78e-09 | 306 |
regional part of nervous system | 2.79e-09 | 53 |
regional part of brain | 2.79e-09 | 53 |
pre-chordal neural plate | 3.07e-09 | 61 |
cell layer | 4.19e-09 | 309 |
compound organ | 4.57e-09 | 68 |
ecto-epithelium | 2.15e-08 | 104 |
cavitated compound organ | 2.59e-08 | 31 |
central nervous system | 1.56e-07 | 81 |
organ system subdivision | 2.06e-07 | 223 |
blood vessel endothelium | 2.69e-07 | 18 |
endothelium | 2.69e-07 | 18 |
cardiovascular system endothelium | 2.69e-07 | 18 |
excretory tube | 3.29e-07 | 16 |
kidney epithelium | 3.29e-07 | 16 |
simple squamous epithelium | 3.54e-07 | 22 |
abdomen element | 4.02e-07 | 54 |
abdominal segment element | 4.02e-07 | 54 |
regional part of forebrain | 5.99e-07 | 41 |
forebrain | 5.99e-07 | 41 |
anterior neural tube | 5.99e-07 | 41 |
future forebrain | 5.99e-07 | 41 |