FFCP PHASE1:Hg19::chr2:218843537..218843559,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7145 | |EntrezGene=7145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11973 | |HGNC=11973 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002vgv.1_5end | |association_with_transcript=0bp_to_uc002vgv.1_5end | ||
|cluster_id=chr2:218843537..218843559,- | |||
|coexpression_cluster_id=C1040 | |||
|description=CAGE_peak_4_at_TNS1_5end | |description=CAGE_peak_4_at_TNS1_5end | ||
|id=chr2:218843537..218843559,- | |id=chr2:218843537..218843559,- | ||
|ontology_enrichment_celltype=CL:0002139!2.24e-08!24;CL:0002078!3.70e-08!44;CL:0000075!2.22e-07!27;CL:0000213!2.85e-07!57;CL:0000215!2.85e-07!57;CL:0000115!3.44e-07!35 | |ontology_enrichment_celltype=CL:0002139!2.24e-08!24;CL:0002078!3.70e-08!44;CL:0000075!2.22e-07!27;CL:0000213!2.85e-07!57;CL:0000215!2.85e-07!57;CL:0000115!3.44e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.42e-09;24!CL:0000115;8.02e-08;36!CL:0000071;3.86e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.28e-09,24;CL:0002078,1.99e-09,45;CL:0000115,7.54e-09,36;CL:0000213,4.52e-08,58;CL:0000215,4.52e-08,58;CL:0000071,2.69e-07,18;CL:0002546,2.69e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;3.86e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-33!115;UBERON:0000477!5.01e-17!286;UBERON:0004111!1.24e-15!241;UBERON:0003075!6.08e-14!86;UBERON:0007284!6.08e-14!86;UBERON:0000481!5.05e-13!347;UBERON:0000025!5.12e-13!194;UBERON:0000483!1.76e-12!309;UBERON:0000119!2.33e-12!312;UBERON:0002346!2.89e-12!90;UBERON:0001049!5.17e-12!57;UBERON:0005068!5.17e-12!57;UBERON:0006241!5.17e-12!57;UBERON:0007135!5.17e-12!57;UBERON:0005743!9.52e-12!86;UBERON:0000468!1.65e-11!659;UBERON:0002616!2.75e-11!59;UBERON:0001017!1.94e-10!82;UBERON:0000073!5.20e-10!94;UBERON:0001016!5.20e-10!94;UBERON:0003103!1.99e-09!69;UBERON:0000064!2.68e-09!219;UBERON:0000955!4.80e-09!69;UBERON:0006238!4.80e-09!69;UBERON:0003056!4.85e-09!61;UBERON:0000153!5.92e-09!129;UBERON:0007811!5.92e-09!129;UBERON:0000922!1.10e-08!612;UBERON:0003080!1.94e-08!42;UBERON:0000033!3.66e-08!123;UBERON:0002780!6.31e-08!41;UBERON:0001890!6.31e-08!41;UBERON:0006240!6.31e-08!41;UBERON:0004876!6.98e-08!20;UBERON:0000467!7.63e-08!625;UBERON:0000480!1.04e-07!626;UBERON:0000489!1.63e-07!32;UBERON:0002553!2.21e-07!70;UBERON:0002050!2.46e-07!605;UBERON:0005423!2.46e-07!605;UBERON:0003064!3.59e-07!37;UBERON:0003887!4.36e-07!21;UBERON:0000923!4.83e-07!604;UBERON:0005291!4.83e-07!604;UBERON:0006598!4.83e-07!604;UBERON:0002532!4.83e-07!604;UBERON:0004121!5.99e-07!169;UBERON:0003886!7.94e-07!63;UBERON:0000475!8.94e-07!365;UBERON:0000080!9.17e-07!18;UBERON:0002120!9.17e-07!18;UBERON:0004875!9.17e-07!18;UBERON:0005721!9.17e-07!18;UBERON:0005754!9.17e-07!18;UBERON:0007297!9.17e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.85e-11;114!UBERON:0004638;3.86e-07;18!UBERON:0001986;3.86e-07;18!UBERON:0004852;3.86e-07;18!UBERON:0000487;4.75e-07;22!UBERON:0000489;7.99e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.70e-41,114;UBERON:0004111,4.42e-14,240;UBERON:0003075,1.05e-13,82;UBERON:0007284,1.05e-13,82;UBERON:0002346,2.36e-12,86;UBERON:0000025,3.53e-12,192;UBERON:0001049,1.53e-10,56;UBERON:0005068,1.53e-10,56;UBERON:0006241,1.53e-10,56;UBERON:0007135,1.53e-10,56;UBERON:0010314,7.33e-10,132;UBERON:0000483,1.78e-09,306;UBERON:0000073,2.79e-09,53;UBERON:0002616,2.79e-09,53;UBERON:0003056,3.07e-09,61;UBERON:0000119,4.19e-09,309;UBERON:0003103,4.57e-09,68;UBERON:0010371,2.15e-08,104;UBERON:0000489,2.59e-08,31;UBERON:0001017,1.56e-07,81;UBERON:0011216,2.06e-07,223;UBERON:0004638,2.69e-07,18;UBERON:0001986,2.69e-07,18;UBERON:0004852,2.69e-07,18;UBERON:0006555,3.29e-07,16;UBERON:0004819,3.29e-07,16;UBERON:0000487,3.54e-07,22;UBERON:0005172,4.02e-07,54;UBERON:0005173,4.02e-07,54;UBERON:0002780,5.99e-07,41;UBERON:0001890,5.99e-07,41;UBERON:0003080,5.99e-07,41;UBERON:0006240,5.99e-07,41 | |||
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| ||
|short_description=p4@TNS1 | |short_description=p4@TNS1 | ||
}} | }} |
Latest revision as of 15:26, 24 September 2015
Short description: | p4@TNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TNS1_5end |
Coexpression cluster: | C1040_smooth_aorta_heart_bladder_uterus_penis_cervix |
Association with transcript: | 0bp_to_uc002vgv.1_5end |
EntrezGene: | TNS1 |
HGNC: | 11973 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.28e-09 | 24 |
meso-epithelial cell | 1.99e-09 | 45 |
endothelial cell | 7.54e-09 | 36 |
lining cell | 4.52e-08 | 58 |
barrier cell | 4.52e-08 | 58 |
blood vessel endothelial cell | 2.69e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.69e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.70e-41 | 114 |
anatomical conduit | 4.42e-14 | 240 |
neural plate | 1.05e-13 | 82 |
presumptive neural plate | 1.05e-13 | 82 |
neurectoderm | 2.36e-12 | 86 |
tube | 3.53e-12 | 192 |
neural tube | 1.53e-10 | 56 |
neural rod | 1.53e-10 | 56 |
future spinal cord | 1.53e-10 | 56 |
neural keel | 1.53e-10 | 56 |
structure with developmental contribution from neural crest | 7.33e-10 | 132 |
epithelium | 1.78e-09 | 306 |
regional part of nervous system | 2.79e-09 | 53 |
regional part of brain | 2.79e-09 | 53 |
pre-chordal neural plate | 3.07e-09 | 61 |
cell layer | 4.19e-09 | 309 |
compound organ | 4.57e-09 | 68 |
ecto-epithelium | 2.15e-08 | 104 |
cavitated compound organ | 2.59e-08 | 31 |
central nervous system | 1.56e-07 | 81 |
organ system subdivision | 2.06e-07 | 223 |
blood vessel endothelium | 2.69e-07 | 18 |
endothelium | 2.69e-07 | 18 |
cardiovascular system endothelium | 2.69e-07 | 18 |
excretory tube | 3.29e-07 | 16 |
kidney epithelium | 3.29e-07 | 16 |
simple squamous epithelium | 3.54e-07 | 22 |
abdomen element | 4.02e-07 | 54 |
abdominal segment element | 4.02e-07 | 54 |
regional part of forebrain | 5.99e-07 | 41 |
forebrain | 5.99e-07 | 41 |
anterior neural tube | 5.99e-07 | 41 |
future forebrain | 5.99e-07 | 41 |