FFCP PHASE1:Hg19::chr12:70637612..70637615,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4848 | |EntrezGene=4848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7878 | |HGNC=7878 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=81bp_to_ENST00000551043_5end | |association_with_transcript=81bp_to_ENST00000551043_5end | ||
|cluster_id=chr12:70637612..70637615,+ | |||
|description=CAGE_peak_30_at_CNOT2_5end | |description=CAGE_peak_30_at_CNOT2_5end | ||
|id=chr12:70637612..70637615,+ | |id=chr12:70637612..70637615,+ | ||
|ontology_enrichment_celltype=CL:0000624!5.00e-08!6;CL:0000623!6.10e-08!3;CL:0000825!6.10e-08!3;CL:0000322!1.64e-07!3;CL:0000791!8.91e-07!18;CL:0000789!8.91e-07!18;CL:0002420!8.91e-07!18;CL:0002419!8.91e-07!18;CL:0000790!8.91e-07!18 | |ontology_enrichment_celltype=CL:0000624!5.00e-08!6;CL:0000623!6.10e-08!3;CL:0000825!6.10e-08!3;CL:0000322!1.64e-07!3;CL:0000791!8.91e-07!18;CL:0000789!8.91e-07!18;CL:0002420!8.91e-07!18;CL:0002419!8.91e-07!18;CL:0000790!8.91e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000623;5.04e-34;3!CL:0000138;8.34e-18;6!CL:0000153;2.31e-12;9!CL:0000447;2.31e-12;9!CL:0000327;5.74e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,5.96e-34,3;CL:0000825,5.96e-34,3;CL:0000058,7.67e-18,6;CL:0000138,7.67e-18,6;CL:0000153,2.19e-12,9;CL:0000447,2.19e-12,9;CL:0000327,5.55e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;1.55e-98;1!DOID:4549;1.55e-98;1!DOID:5861;1.55e-98;1!DOID:6496;1.55e-98;1!DOID:201;8.34e-18;6!DOID:0060100;8.34e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.37e-99,1;DOID:4549,9.37e-99,1;DOID:5861,9.37e-99,1;DOID:6496,9.37e-99,1;DOID:201,7.67e-18,6;DOID:0060100,7.67e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0004821!1.64e-07!3;UBERON:0003215!1.64e-07!3;UBERON:0002299!1.64e-07!3;UBERON:0006524!1.64e-07!3;UBERON:0008874!1.64e-07!3;UBERON:0002169!1.64e-07!3;UBERON:0004894!1.64e-07!3 | |ontology_enrichment_uberon=UBERON:0004821!1.64e-07!3;UBERON:0003215!1.64e-07!3;UBERON:0002299!1.64e-07!3;UBERON:0006524!1.64e-07!3;UBERON:0008874!1.64e-07!3;UBERON:0002169!1.64e-07!3;UBERON:0004894!1.64e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002418;5.04e-34;3!UBERON:0004755;5.04e-34;3!UBERON:0001474;7.39e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,4.27e-34,3;UBERON:0004755,4.27e-34,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0.619412741790207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07813787429759,0.641715181398742,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.412098027064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0.619412741790207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07813787429759,0.641715181398742,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.412098027064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p30@CNOT2 | |short_description=p30@CNOT2 | ||
}} | }} |
Latest revision as of 15:09, 24 September 2015
Short description: | p30@CNOT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_CNOT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 81bp_to_ENST00000551043_5end |
EntrezGene: | CNOT2 |
HGNC: | 7878 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 5.96e-34 | 3 |
pro-NK cell | 5.96e-34 | 3 |
chondroblast | 7.67e-18 | 6 |
chondrocyte | 7.67e-18 | 6 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 4.27e-34 | 3 |
skeletal tissue | 4.27e-34 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.37e-99 | 1 |
extraosseous chondrosarcoma | 9.37e-99 | 1 |
myxoid chondrosarcoma | 9.37e-99 | 1 |
extraskeletal myxoid chondrosarcoma | 9.37e-99 | 1 |
connective tissue cancer | 7.67e-18 | 6 |
musculoskeletal system cancer | 7.67e-18 | 6 |