FFCP PHASE1:Hg19::chr7:100303728..100303787,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10248 | |EntrezGene=10248 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19949 | |HGNC=19949 | ||
|TSSclassifier=strong | |||
|UniProt=O75817 | |UniProt=O75817 | ||
|association_with_transcript=52bp_to_ENST00000303151,NM_005837,uc003uwh.3_5end | |association_with_transcript=52bp_to_ENST00000303151,NM_005837,uc003uwh.3_5end | ||
|cluster_id=chr7:100303728..100303787,+ | |||
|coexpression_cluster_id=C3766 | |||
|description=CAGE_peak_1_at_POP7_5end | |description=CAGE_peak_1_at_POP7_5end | ||
|id=chr7:100303728..100303787,+ | |id=chr7:100303728..100303787,+ | ||
|ontology_enrichment_celltype=CL:0002321!1.65e-21!248;CL:0000220!7.83e-21!246;CL:0000066!2.31e-20!254;CL:0000548!1.07e-09!679;CL:0000004!1.07e-09!679;CL:0000255!1.07e-09!679;CL:0000222!1.20e-09!119;CL:0000012!3.49e-09!682;CL:0000055!2.60e-08!180;CL:0000221!9.77e-08!71;CL:0000393!3.08e-07!60;CL:0000211!3.08e-07!60;CL:0000076!4.31e-07!62;CL:0000133!5.97e-07!59 | |ontology_enrichment_celltype=CL:0002321!1.65e-21!248;CL:0000220!7.83e-21!246;CL:0000066!2.31e-20!254;CL:0000548!1.07e-09!679;CL:0000004!1.07e-09!679;CL:0000255!1.07e-09!679;CL:0000222!1.20e-09!119;CL:0000012!3.49e-09!682;CL:0000055!2.60e-08!180;CL:0000221!9.77e-08!71;CL:0000393!3.08e-07!60;CL:0000211!3.08e-07!60;CL:0000076!4.31e-07!62;CL:0000133!5.97e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.27e-21,250;CL:0000066,1.19e-20,253;CL:0000222,1.04e-09,121;CL:0000221,1.68e-07,72;CL:0000133,5.97e-07,59;CL:0000393,6.48e-07,61;CL:0000211,6.48e-07,61;CL:0000076,7.55e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.74e-19!235;DOID:14566!4.06e-19!239;DOID:0050687!1.05e-11!143;DOID:0050686!3.36e-08!137;DOID:305!9.20e-08!106;DOID:2531!8.37e-07!51;DOID:0060083!8.37e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.74e-19,235;DOID:14566,4.06e-19,239;DOID:0050687,1.05e-11,143;DOID:0050686,3.36e-08,137;DOID:305,9.20e-08,106;DOID:2531,8.37e-07,51;DOID:0060083,8.37e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000119!8.47e-12!312;UBERON:0000483!2.16e-11!309;UBERON:0003104!3.70e-10!238;UBERON:0009142!3.70e-10!238;UBERON:0002100!1.24e-09!216;UBERON:0000481!2.54e-09!347;UBERON:0000490!3.70e-09!138;UBERON:0005256!6.42e-09!143;UBERON:0003914!1.15e-08!118;UBERON:0000475!5.61e-08!365;UBERON:0000064!2.25e-07!219 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.25e-11,309;UBERON:0000483,3.16e-11,306;UBERON:0002100,1.88e-10,199;UBERON:0000490,3.10e-10,148;UBERON:0003914,6.42e-09,117;UBERON:0003104,9.16e-09,160;UBERON:0009142,9.16e-09,160;UBERON:0007503,2.35e-08,78;UBERON:0005256,3.85e-08,122 | |||
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| ||
|short_description=p1@POP7 | |short_description=p1@POP7 | ||
}} | }} |
Latest revision as of 14:24, 24 September 2015
Short description: | p1@POP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_POP7_5end |
Coexpression cluster: | C3766_Alveolar_Renal_chronic_Placental_nonsmall_acute_carcinoid |
Association with transcript: | 52bp_to_ENST00000303151, NM_005837, uc003uwh.3_5end |
EntrezGene: | POP7 |
HGNC: | 19949 |
UniProt: | O75817 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.27e-21 | 250 |
epithelial cell | 1.19e-20 | 253 |
mesodermal cell | 1.04e-09 | 121 |
ectodermal cell | 1.68e-07 | 72 |
neurectodermal cell | 5.97e-07 | 59 |
electrically responsive cell | 6.48e-07 | 61 |
electrically active cell | 6.48e-07 | 61 |
squamous epithelial cell | 7.55e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
cell layer | 1.25e-11 | 309 |
epithelium | 3.16e-11 | 306 |
trunk | 1.88e-10 | 199 |
unilaminar epithelium | 3.10e-10 | 148 |
epithelial tube | 6.42e-09 | 117 |
mesenchyme | 9.16e-09 | 160 |
entire embryonic mesenchyme | 9.16e-09 | 160 |
epithelial vesicle | 2.35e-08 | 78 |
trunk mesenchyme | 3.85e-08 | 122 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.74e-19 | 235 |
disease of cellular proliferation | 4.06e-19 | 239 |
cell type cancer | 1.05e-11 | 143 |
organ system cancer | 3.36e-08 | 137 |
carcinoma | 9.20e-08 | 106 |
hematologic cancer | 8.37e-07 | 51 |
immune system cancer | 8.37e-07 | 51 |