FFCP PHASE1:Hg19::chr2:218706844..218706855,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7145 | |EntrezGene=7145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11973 | |HGNC=11973 | ||
|TSSclassifier=strong | |||
|UniProt=Q59G71 | |UniProt=Q59G71 | ||
|association_with_transcript=27bp_to_AB209238_5end | |association_with_transcript=27bp_to_AB209238_5end | ||
|cluster_id=chr2:218706844..218706855,- | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_34_at_TNS1_5end | |description=CAGE_peak_34_at_TNS1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000764!9.98e-16!2;CL:0000765!9.98e-16!2;CL:0000050!9.98e-16!2;CL:0000038!9.98e-16!2;CL:0000558!9.98e-16!2;CL:0000547!9.98e-16!2;CL:0000549!9.98e-16!2;CL:0000550!9.98e-16!2;CL:0000552!9.98e-16!2 | |ontology_enrichment_celltype=CL:0000764!9.98e-16!2;CL:0000765!9.98e-16!2;CL:0000050!9.98e-16!2;CL:0000038!9.98e-16!2;CL:0000558!9.98e-16!2;CL:0000547!9.98e-16!2;CL:0000549!9.98e-16!2;CL:0000550!9.98e-16!2;CL:0000552!9.98e-16!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.30e-37;2!CL:0000558;1.30e-37;2 | |ontology_enrichment_celltype_v019=CL:0000764;1.30e-37;2!CL:0000558;1.30e-37;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.30e-37,2;CL:0000765,1.30e-37,2;CL:0000050,1.30e-37,2;CL:0000038,1.30e-37,2;CL:0000558,1.30e-37,2;CL:0000547,1.30e-37,2;CL:0000549,1.30e-37,2;CL:0000550,1.30e-37,2;CL:0000552,1.30e-37,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1036!4.29e-30!8;DOID:8692!2.05e-07!31 | |ontology_enrichment_disease=DOID:1036!4.29e-30!8;DOID:8692!2.05e-07!31 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.89e-22!15;UBERON:0000179!1.89e-22!15;UBERON:0000463!1.89e-22!15;UBERON:0002363!5.07e-08!1;UBERON:0007647!5.07e-08!1;UBERON:0010115!5.07e-08!1;UBERON:0007023!7.48e-08!115 | |ontology_enrichment_uberon=UBERON:0000178!1.89e-22!15;UBERON:0000179!1.89e-22!15;UBERON:0000463!1.89e-22!15;UBERON:0002363!5.07e-08!1;UBERON:0007647!5.07e-08!1;UBERON:0010115!5.07e-08!1;UBERON:0007023!7.48e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.25e-43;15!UBERON:0000179;8.25e-43;15!UBERON:0000463;8.25e-43;15!UBERON:0002390;5.60e-26;32!UBERON:0002193;6.38e-14;42!UBERON:0002106;2.47e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000178;8.25e-43;15!UBERON:0000179;8.25e-43;15!UBERON:0000463;8.25e-43;15!UBERON:0002390;5.60e-26;32!UBERON:0002193;6.38e-14;42!UBERON:0002106;2.47e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.54e-43,15;UBERON:0000179,9.54e-43,15;UBERON:0000463,9.54e-43,15;UBERON:0007023,1.11e-09,114;UBERON:0002390,1.41e-08,98;UBERON:0003061,1.41e-08,98;UBERON:0002193,9.39e-08,108;UBERON:0002106,2.47e-07,3;UBERON:0004854,2.47e-07,3;UBERON:0009034,2.47e-07,3;UBERON:0002095,2.47e-07,3;UBERON:0004782,2.47e-07,3;UBERON:0003281,2.47e-07,3;UBERON:0009664,2.47e-07,3;UBERON:0002296,2.47e-07,3;UBERON:0005602,2.47e-07,3;UBERON:0001179,2.47e-07,3;UBERON:0006293,2.47e-07,3 | |||
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|short_description=p34@TNS1 | |short_description=p34@TNS1 | ||
}} | }} |
Latest revision as of 08:52, 20 September 2015
Short description: | p34@TNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_TNS1_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 27bp_to_AB209238_5end |
EntrezGene: | TNS1 |
HGNC: | 11973 |
UniProt: | Q59G71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.30e-37 | 2 |
erythroblast | 1.30e-37 | 2 |
megakaryocyte-erythroid progenitor cell | 1.30e-37 | 2 |
erythroid progenitor cell | 1.30e-37 | 2 |
reticulocyte | 1.30e-37 | 2 |
proerythroblast | 1.30e-37 | 2 |
basophilic erythroblast | 1.30e-37 | 2 |
polychromatophilic erythroblast | 1.30e-37 | 2 |
orthochromatic erythroblast | 1.30e-37 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 9.54e-43 | 15 |
haemolymphatic fluid | 9.54e-43 | 15 |
organism substance | 9.54e-43 | 15 |
adult organism | 1.11e-09 | 114 |
hematopoietic system | 1.41e-08 | 98 |
blood island | 1.41e-08 | 98 |
hemolymphoid system | 9.39e-08 | 108 |
spleen | 2.47e-07 | 3 |
gastrointestinal system mesentery | 2.47e-07 | 3 |
stomach region | 2.47e-07 | 3 |
mesentery | 2.47e-07 | 3 |
gastrointestinal system serosa | 2.47e-07 | 3 |
mesentery of stomach | 2.47e-07 | 3 |
gut mesentery | 2.47e-07 | 3 |
dorsal mesentery | 2.47e-07 | 3 |
dorsal mesogastrium | 2.47e-07 | 3 |
peritoneal cavity | 2.47e-07 | 3 |
spleen primordium | 2.47e-07 | 3 |