FFCP PHASE1:Hg19::chr22:38732156..38732200,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1454 | |EntrezGene=1454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2453 | |HGNC=2453 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003avo.2_5end | |association_with_transcript=0bp_to_uc003avo.2_5end | ||
|cluster_id=chr22:38732156..38732200,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_6_at_CSNK1E_5end | |description=CAGE_peak_6_at_CSNK1E_5end | ||
|id=chr22:38732156..38732200,- | |id=chr22:38732156..38732200,- | ||
|ontology_enrichment_celltype=CL:0000066!4.25e-30!254;CL:0002076!1.30e-11!43;CL:0000223!5.73e-09!59 | |ontology_enrichment_celltype=CL:0000066!4.25e-30!254;CL:0002076!1.30e-11!43;CL:0000223!5.73e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.74e-12;42!CL:0002368;7.88e-12;13!CL:0002322;1.47e-09;5!CL:0000039;7.44e-09;7!CL:0000586;7.44e-09;7!CL:0002202;5.43e-07;9!CL:0002632;5.43e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.20e-24,253;CL:0002076,1.97e-16,42;CL:0000223,6.95e-13,58;CL:0002368,8.54e-12,13;CL:0002322,1.47e-09,5;CL:0000039,7.24e-09,7;CL:0000586,7.24e-09,7;CL:0002202,6.98e-07,9;CL:0002632,6.98e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.04e-08;10!UBERON:0005564;5.04e-08;10!CL:0000223;3.96e-07;58 | |||
|ontology_enrichment_disease=DOID:305!6.96e-19!106;DOID:0050687!3.76e-13!143;DOID:1749!2.67e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.52e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.22e-14,106;DOID:1749,1.08e-10,14;DOID:0050687,1.91e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.71e-15!169;UBERON:0000925!4.71e-15!169;UBERON:0006595!4.71e-15!169;UBERON:0000464!2.00e-12!104;UBERON:0001004!5.46e-12!72;UBERON:0001007!1.23e-11!155;UBERON:0001555!1.23e-11!155;UBERON:0007026!1.23e-11!155;UBERON:0000466!7.56e-11!126;UBERON:0004921!4.91e-10!129;UBERON:0004185!4.91e-10!129;UBERON:0000077!1.39e-09!130;UBERON:0000065!6.17e-09!53;UBERON:0002553!9.09e-09!70;UBERON:0000161!2.09e-08!35;UBERON:0001008!1.59e-07!45;UBERON:0000062!2.92e-07!511;UBERON:0006554!4.43e-07!44;UBERON:0001041!5.61e-07!98;UBERON:0000058!5.92e-07!26;UBERON:0000468!6.58e-07!659;UBERON:0000072!9.73e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;9.24e-08;5!UBERON:0000486;5.03e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.96e-13,160;UBERON:0000925,2.96e-13,160;UBERON:0006595,2.96e-13,160;UBERON:0000161,7.24e-10,36;UBERON:0001004,1.52e-09,74;UBERON:0001007,2.75e-09,145;UBERON:0001555,2.75e-09,145;UBERON:0007026,2.75e-09,145;UBERON:0004921,3.41e-08,118;UBERON:0000365,8.57e-08,5;UBERON:0000065,1.88e-07,54;UBERON:0000166,4.25e-07,22;UBERON:0001008,9.88e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,2.10844143144775,6.65557218300218,0,0,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0.612167784741805,0,0,0.329851300186716,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,11.6574492253614,5.19098219898201,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.550236083880135,0,0.258416759169329,0,0,0.805658634218294,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0.397227542439656,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0.280901613404497,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0.250237039743928,0,0,0,0.150238058906597,0,0.538168907066586,0,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0.201504196455281,0.508681776931463,2.89891279744945,9.00062197949754,2.86804595389004,35.1284273653235,24.2529476028318,33.9286313178994,14.9271919222133,19.681026368299,14.5990943630332,0,0,0,0,0,0.591534000199219,0.168584690078102,0.482022059766964,0.330881918197182,0,0.71181185733329,0.404493924480493,0.392442930250692,1.53898862778556,0,0,0,0,0,0,0.590789906681404,0,0.737930631258681,0.514703430895577,2.30475599358114,3.37205259772859,3.9206299240536,2.12953423864618,0,0,1.44331342025273,0.34779121492523,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,6.56136837907439,1.17587489739202,3.68615252830205,0.895585227028483,3.19697332365358,1.15014803749563,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0.411309970813294,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0.904318131178758,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.502548796003046,0,1.49801404789436,0,0.828831026872071,0,0,0.271265023699736,0.415941723061614,0.356857977594324,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,4.0101294060657,24.2173000901407,0,0,0,3.15839729035188,4.38987421495164,0.784349769176855,1.46139224653261,2.00548094896464,1.13733384070897,0.340187410553031,0.215915916102139,0,0.270946437543853,1.00337954770971,3.05851527654046,4.15538004464362,0.223874754722178,0,0,0,0,0,0.721287081534056,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0,0,6.61139661443912,2.88285101047659,11.4851441245126,3.94515345336645,0,0.62962469366128,0,0,0.532306030317022,0,0.37064843820784,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0.274537029736055,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,4.04132873447151,2.01090682660736,1.08890984861323,1.50630081242847,3.01353760869861,8.42357378338128,3.10401107475673,1.83778720165568,0,0,0,0,0.411362273086194,0,0,0,0,0,14.9474531748429,0,0,0,0,0,0,0,0.324621940274555,0.280797178113459,0,0,0,0.169291777801603,0,0,0,1.03051603426729,0,0.447352215784832,0.166849141711909,0.390776190804081,0,0,0,0,0,2.43282702530686,0.146508179271894,0,0,0,4.29740072527842,0,3.37876772309155,0,0.140669416410513,0.445234820091624,0,0.844501632511974,1.39473591775749,0,0.755798243562828,0.102268682502155,0,4.66559381492711,2.78591888556713,5.01259289091706,0,1.7755813014648,0,0,0,0,1.99613798001194,0,0.437299999980979,0,1.93448862085349,1.5255219017566,5.90969204419841,0,0,0,0,0,0,0,0.295547618953547,0,0.10893846351899,2.09135616417905,1.46205491157214,0.113942055847001,0.69169171316418,2.60297168788339,18.7959953425074,1.5950057986596,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0.421996129056054,0.979396848954886,0.424059214301822,0,0,0.353830258013357,1.22206028986725,0,0,0,0,0,0,0,2.54364004611717,0,2.76209081994573,0,1.83643656978294,0.063186579628488,0.150323419414493,0,0,0.330991955875499,0,0,0,0,4.33899345837827,6.76147542159206,2.43765778425127,0.17472666824203,0,0.483781656445426,0.292357268344742,0.164230914106418,9.5049236158651,1.6768664071385,1.80784592624426,0,0,0,4.49768180290047,2.24444696704294,0.85381197895741,0,0.288180834308212,0,0,0.576219191952599,0.124252535565433,7.30651507312066,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,1.59743200399193,0,0.223171457441873,0.0671834724867263,1.08089965062721,1.16495949527454,0,0,0,0,0,0,0.136203406111576,17.2005868857571,31.0839126709748,35.3124287324807,10.798746794472,34.8210879551077,0.242998226632099,2.34804281319486,0.0788057072991982,0.262272940674991,0,0,2.68681276247223,0,0,0,0,0,0,0,0.082092520749339,0,0.339936274560377,0,0,0,0,0,3.52407511158336,0.427149650270779,1.10043013569766,0,0,0,0,5.10673006216145,0,0,0,0,0.628216385000937,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0.1249804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| ||
|short_description=p6@CSNK1E | |short_description=p6@CSNK1E | ||
}} | }} |
Latest revision as of 07:57, 20 September 2015
Short description: | p6@CSNK1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CSNK1E_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 0bp_to_uc003avo.2_5end |
EntrezGene: | CSNK1E |
HGNC: | 2453 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.20e-24 | 253 |
endo-epithelial cell | 1.97e-16 | 42 |
endodermal cell | 6.95e-13 | 58 |
respiratory epithelial cell | 8.54e-12 | 13 |
embryonic stem cell | 1.47e-09 | 5 |
germ line cell | 7.24e-09 | 7 |
germ cell | 7.24e-09 | 7 |
epithelial cell of tracheobronchial tree | 6.98e-07 | 9 |
epithelial cell of lower respiratory tract | 6.98e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.96e-13 | 160 |
endoderm | 2.96e-13 | 160 |
presumptive endoderm | 2.96e-13 | 160 |
orifice | 7.24e-10 | 36 |
respiratory system | 1.52e-09 | 74 |
digestive system | 2.75e-09 | 145 |
digestive tract | 2.75e-09 | 145 |
primitive gut | 2.75e-09 | 145 |
subdivision of digestive tract | 3.41e-08 | 118 |
urothelium | 8.57e-08 | 5 |
respiratory tract | 1.88e-07 | 54 |
oral opening | 4.25e-07 | 22 |
renal system | 9.88e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.22e-14 | 106 |
squamous cell carcinoma | 1.08e-10 | 14 |
cell type cancer | 1.91e-10 | 143 |