FFCP PHASE1:Hg19::chrX:19689008..19689051,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:19689008..19689051,- to FFCP PHASE1:Hg19::chrX:19689008..19689051,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=30011 | |EntrezGene=30011 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13867 | |HGNC=13867 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc011mjf.1_5end | |||
|cluster_id=chrX:19689008..19689051,- | |||
|description=CAGE_peak_2_at_SH3KBP1_5end | |||
|id=chrX:19689008..19689051,- | |||
|ontology_enrichment_celltype=CL:0000055!6.41e-25!180;CL:0000222!1.76e-15!119;CL:0000220!2.85e-15!246;CL:0002321!7.41e-15!248;CL:0000057!5.36e-14!75;CL:0000680!2.97e-13!57;CL:0000056!2.97e-13!57;CL:0000355!2.97e-13!57;CL:0000183!5.27e-13!59;CL:0000187!8.56e-13!54;CL:0000393!6.15e-10!60;CL:0000211!6.15e-10!60;CL:0000066!2.27e-09!254;CL:0000192!5.34e-09!42;CL:0000514!5.34e-09!42;CL:0000359!6.29e-09!32;CL:0000548!7.49e-08!679;CL:0000004!7.49e-08!679;CL:0000255!7.49e-08!679;CL:0000012!3.11e-07!682;CL:0000077!8.69e-07!19;CL:0002620!9.23e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.85e-09;32!CL:0000187;9.39e-08;55!CL:0000057;4.07e-07;73!CL:0000192;6.16e-07;43!CL:0002620;6.24e-07;23!CL:0000077;9.06e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.30e-16,121;CL:0000057,3.78e-15,76;CL:0000680,1.29e-13,58;CL:0000056,1.29e-13,58;CL:0000355,1.29e-13,58;CL:0002321,3.43e-13,250;CL:0000187,3.97e-13,55;CL:0000393,4.84e-10,61;CL:0000211,4.84e-10,61;CL:0000359,2.54e-09,32;CL:0000192,3.66e-09,43;CL:0000514,3.66e-09,43;CL:0000066,4.40e-08,253;CL:0002620,4.84e-07,23;CL:0000077,7.84e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000355;5.51e-08;58!CL:0000514;6.16e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.08e-21!365;UBERON:0000119!4.59e-18!312;UBERON:0000483!3.43e-17!309;UBERON:0000914!8.73e-17!83;UBERON:0002329!8.73e-17!83;UBERON:0003077!8.73e-17!83;UBERON:0003059!8.73e-17!83;UBERON:0007282!8.73e-17!83;UBERON:0009618!8.73e-17!83;UBERON:0007285!8.73e-17!83;UBERON:0000481!1.04e-16!347;UBERON:0005256!3.79e-16!143;UBERON:0000486!4.83e-15!82;UBERON:0004290!1.77e-14!70;UBERON:0003104!3.97e-14!238;UBERON:0009142!3.97e-14!238;UBERON:0002100!1.08e-13!216;UBERON:0000477!1.64e-12!286;UBERON:0001134!7.52e-12!61;UBERON:0002036!7.52e-12!61;UBERON:0003082!7.52e-12!61;UBERON:0000490!3.29e-11!138;UBERON:0002385!3.70e-11!63;UBERON:0001015!3.70e-11!63;UBERON:0000383!3.70e-11!63;UBERON:0000467!4.74e-11!625;UBERON:0000480!8.23e-11!626;UBERON:0000468!1.22e-10!659;UBERON:0003102!3.68e-10!95;UBERON:0002049!1.40e-09!79;UBERON:0007798!1.40e-09!79;UBERON:0004111!1.68e-09!241;UBERON:0003914!4.16e-09!118;UBERON:0002199!7.19e-08!45;UBERON:0002416!7.19e-08!45;UBERON:0000923!7.44e-08!604;UBERON:0005291!7.44e-08!604;UBERON:0006598!7.44e-08!604;UBERON:0002532!7.44e-08!604;UBERON:0000025!7.51e-08!194;UBERON:0002050!8.26e-08!605;UBERON:0005423!8.26e-08!605;UBERON:0004872!1.06e-07!84;UBERON:0001981!2.64e-07!60;UBERON:0007500!2.64e-07!60;UBERON:0004537!2.64e-07!60;UBERON:0006965!2.64e-07!60;UBERON:0001637!2.67e-07!42;UBERON:0003509!2.67e-07!42;UBERON:0004572!2.67e-07!42;UBERON:0000922!3.19e-07!612;UBERON:0000055!4.10e-07!69;UBERON:0002097!4.26e-07!40 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,4.15e-16,309;UBERON:0000486,2.45e-15,83;UBERON:0000483,2.93e-15,306;UBERON:0007503,5.41e-15,78;UBERON:0007524,6.29e-15,73;UBERON:0002329,7.36e-15,71;UBERON:0003059,7.36e-15,71;UBERON:0007282,7.36e-15,71;UBERON:0004290,7.36e-15,71;UBERON:0009618,7.36e-15,71;UBERON:0003077,9.44e-15,72;UBERON:0007285,9.44e-15,72;UBERON:0000490,1.77e-12,148;UBERON:0005256,3.27e-12,122;UBERON:0001134,4.12e-12,62;UBERON:0002036,4.12e-12,62;UBERON:0003082,4.12e-12,62;UBERON:0003104,2.33e-11,160;UBERON:0009142,2.33e-11,160;UBERON:0002385,5.04e-11,64;UBERON:0001015,5.04e-11,64;UBERON:0000383,5.04e-11,64;UBERON:0002100,3.99e-10,199;UBERON:0003102,2.08e-09,99;UBERON:0002049,5.26e-09,78;UBERON:0007798,5.26e-09,78;UBERON:0003914,7.21e-09,117;UBERON:0002199,2.87e-08,46;UBERON:0002416,2.87e-08,46;UBERON:0004111,1.53e-07,240;UBERON:0004872,1.67e-07,83;UBERON:0002097,1.87e-07,41;UBERON:0001637,2.74e-07,42;UBERON:0003509,2.74e-07,42;UBERON:0004572,2.74e-07,42;UBERON:0000025,5.66e-07,192;UBERON:0007500,7.22e-07,59;UBERON:0001981,7.22e-07,59;UBERON:0004537,7.22e-07,59;UBERON:0006965,7.22e-07,59 | |||
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|phase1_expression=7.99384868790449,4.06790995392868,1.55049844505568,0,0,0,2.53299878168311,13.8978372153903,1.04474251279935,16.2184398090996,4.88460817580699,12.4511582114198,13.7158828678796,15.4707941200058,6.95934489028623,18.1527789541979,17.4781413126953,18.2577522596843,14.6379839637152,3.93987385845721,2.85600967741954,0.313454721478088,2.0036519099174,1.77936752594749,2.88748071068046,0,0.164201178899891,0.157421562627358,0,0,0,0.919421224478927,1.8072355126695,2.9580320813343,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,12.0726154746655,4.98663991189768,2.53007406669196,0,1.88300474649071,20.6774346233286,12.6525066278685,13.4239440372976,6.43015252641436,3.68906099911129,1.11332214173056,2.91436230634034,1.48313777113772,0,0,0.398873881556595,0,0,0,1.39133685156694,5.16140757063675,4.85996702250632,1.13061588384802,0.419499436209906,3.02629846134074,1.46296476575767,7.75250277507987,9.60568909254118,3.01248551488203,4.43112248820062,19.0068026429628,1.95249646038536,8.08858776760911,4.0507097394088,7.5011771758627,5.61323431565425,5.85579698513276,4.5994991239765,4.74632829784064,4.03043836646896,0,0,2.61656431285521,14.9091585508596,6.83804762988731,4.36950296683622,2.86836620748814,8.15737279056221,5.60677600142307,9.60740961567345,14.8000529050296,27.3865711151794,9.29503637280848,11.4423332179421,14.8330279092033,15.55674996096,22.0262145923769,15.608003841516,17.6846264678779,7.32298534703825,18.5546507857149,14.5685649931318,15.5900395439496,19.5988004404698,22.1101771161182,14.982238270486,1.18800285728205,2.22540236350701,5.46096817162816,5.74894513452991,32.6572061070888,25.3990595340087,34.6330144355229,16.242171972591,6.43624371177941,1.80285670687916,16.6745309245231,17.7595739331973,2.56268866582281,5.51022943014861,18.9057390533173,10.8205155700361,5.66809188100384,6.70020682793723,25.4852261684312,15.5899208257918,15.6508940031351,2.57739716198438,2.90962902273861,16.6854508482809,19.7474112526175,21.7037558157424,18.7463027568398,19.6377206825401,9.46455164783713,0.121973706129595,0.132529768321485,0.116193942869518,1.86589899027667,0,0,6.25798129319264,11.5783368874719,22.1015874163969,1.85747171212792,1.44375896333917,8.75470320294845,4.88895601226495,7.47134192638794,9.1543997367887,7.62578054323422,7.35538919244399,10.3820107283327,10.0072947213927,6.92544882503503,2.21446636387394,2.80483547606892,2.057870056657,0,0,0,0.590789906681404,0.441463099414651,0.860919069801795,9.77936518701596,18.9867993756922,4.49607013030478,7.43914395846068,6.48119116109707,16.6162235708266,5.19967392639789,8.6598805215164,6.37617227362923,12.4453215889971,7.07395594029262,0.925971025153221,1.14152491340759,0,0,0,0.234004265139238,0.148631162288728,3.74935335947108,4.36753533317035,5.81277898693785,18.896848290301,19.7631078189494,16.8688378832693,0,0,0.207328115540772,0.144119953416961,0,0.63497894292169,2.29193055334967,0,0,3.70178973731965,6.30720421472227,1.14330573052231,23.7717898812165,4.79556075716608,47.0831794970499,12.6686281442622,3.57656445851882,15.215449546008,10.3715865468099,7.28052058379563,17.2328940755635,0,13.5875311298211,2.43062589218851,2.17048642156577,6.58592269424615,26.3846309277925,2.48774364119782,7.91951872933429,69.3310567237048,46.1912733058156,63.9827143565165,0,0,0,27.0776086705488,9.18895486672911,32.8064881593652,13.8990054400876,2.26023954805422,15.2201818753911,0,0,0,0.128343036279748,13.2129204595681,1.30139853857622,0.773288812777695,1.34013012267479,0,0,0,0,5.88919160251872,7.50255781589516,4.34024037919577,3.95144636908534,9.63516539504674,5.83498935625558,4.80279801470124,11.736897889381,6.82222512167955,2.0694614258501,31.2186031311655,14.3807951462528,9.55719759148911,4.50342662164303,4.46086450954113,0,0,0,1.5156378572313,4.99306318531491,3.0239029332968,13.6459294300327,21.3312142870407,6.17452207752762,3.97231362692673,9.21073048320066,4.02134802859019,0,25.2903897836355,23.793271191959,39.4210348866284,50.8869340599949,21.4989200150925,0.725156697549733,10.4263364557708,2.67034867914099,11.7110737127899,11.8359259204366,1.18011973463482,4.96319574198153,15.9421747806139,3.13739907670742,1.46139224653261,16.6771573650744,0,7.99440414799624,16.8414414559669,4.62681758070868,8.39933956385944,3.51182841698397,3.3133915495855,1.66215201785745,8.73111543416495,0,0,2.05160100093111,1.31205858279882,0,0.721287081534056,1.73981983154852,1.56768049849117,9.18824860793876,4.55042172225565,12.8547143875328,46.788627653387,14.3265213916619,10.4382498813768,13.0944743860304,27.2847421965415,17.111969881879,14.4885266607372,13.0877092400704,8.59481559877086,6.53446229041361,10.2090169995667,2.52894452138875,19.0586675211887,27.3886741742657,19.5170435644968,13.5534775277479,11.1784266366575,16.5287268494264,7.04232032594896,6.297495016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| ||
|short_description=p2@SH3KBP1 | |||
}} | }} |
Latest revision as of 07:53, 20 September 2015
Short description: | p2@SH3KBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SH3KBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc011mjf.1_5end |
EntrezGene: | SH3KBP1 |
HGNC: | 13867 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.30e-16 | 121 |
fibroblast | 3.78e-15 | 76 |
muscle precursor cell | 1.29e-13 | 58 |
myoblast | 1.29e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.29e-13 | 58 |
embryonic cell | 3.43e-13 | 250 |
muscle cell | 3.97e-13 | 55 |
electrically responsive cell | 4.84e-10 | 61 |
electrically active cell | 4.84e-10 | 61 |
vascular associated smooth muscle cell | 2.54e-09 | 32 |
smooth muscle cell | 3.66e-09 | 43 |
smooth muscle myoblast | 3.66e-09 | 43 |
epithelial cell | 4.40e-08 | 253 |
skin fibroblast | 4.84e-07 | 23 |
mesothelial cell | 7.84e-07 | 19 |