FFCP PHASE1:Hg19::chr3:128597811..128597838,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28976 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21497 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H845,Q59FN3 | |||
|association_with_transcript=-494bp_to_NM_014049,NR_033426,uc003ela.3,uc010hsw.1_5end | |||
|cluster_id=chr3:128597811..128597838,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_ACAD9_5end | |||
|id=chr3:128597811..128597838,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.86e-52!42;CL:0000860!2.16e-50!45;CL:0002009!2.64e-36!65;CL:0002194!1.27e-35!63;CL:0000576!1.27e-35!63;CL:0000040!1.27e-35!63;CL:0000559!1.27e-35!63;CL:0000557!5.98e-34!71;CL:0000766!9.66e-33!76;CL:0000839!1.37e-32!70;CL:0002087!6.21e-22!119;CL:0000763!1.10e-21!112;CL:0000049!1.10e-21!112;CL:0002031!1.42e-21!124;CL:0000738!7.35e-21!140;CL:0002032!2.79e-16!165;CL:0000837!2.79e-16!165;CL:0000037!5.87e-16!172;CL:0000566!5.87e-16!172;CL:0000988!4.15e-15!182;CL:0000134!4.84e-10!358;CL:0002320!4.96e-10!365;CL:0000219!6.23e-09!390;CL:0000048!6.45e-09!430;CL:0000723!1.60e-08!436;CL:0000034!1.72e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.21e-141;33!CL:0002057;1.21e-141;33!CL:0000473;1.35e-99;39!CL:0000234;1.35e-99;39!CL:0000576;5.34e-66;48!CL:0000766;4.98e-37;69!CL:0002087;3.54e-19;104!CL:0000763;1.24e-18;100!CL:0000738;1.10e-10;136!CL:0000988;4.87e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.43e-130,42;CL:0002057,8.43e-130,42;CL:0000473,5.80e-113,48;CL:0000234,5.80e-113,48;CL:0002194,2.22e-89,59;CL:0000576,2.22e-89,59;CL:0000040,2.22e-89,59;CL:0000559,2.22e-89,59;CL:0002009,2.45e-86,61;CL:0000839,1.60e-79,66;CL:0000557,2.80e-78,67;CL:0000766,1.42e-72,72;CL:0002087,5.91e-47,115;CL:0000763,6.30e-47,108;CL:0000049,6.30e-47,108;CL:0002031,8.42e-45,120;CL:0000738,5.80e-39,136;CL:0002032,3.83e-32,161;CL:0000837,3.83e-32,161;CL:0000037,1.36e-30,168;CL:0000988,8.83e-29,177;CL:0000134,8.31e-13,354;CL:0002320,1.88e-12,361;CL:0000219,3.37e-11,386;CL:0000048,1.15e-09,427;CL:0000723,1.88e-09,433;CL:0000034,3.54e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.39e-95;42!CL:0000049;8.04e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.02e-28!80;UBERON:0001474!2.46e-27!86;UBERON:0002390!7.48e-25!102;UBERON:0003061!7.48e-25!102;UBERON:0002405!3.24e-24!115;UBERON:0002193!6.19e-24!112;UBERON:0004765!2.07e-21!101;UBERON:0001434!2.07e-21!101;UBERON:0002204!2.46e-10!167;UBERON:0002384!8.04e-10!375;UBERON:0003081!1.01e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.53e-68,76;UBERON:0001474,3.19e-63,82;UBERON:0004765,3.21e-57,90;UBERON:0002405,3.13e-55,93;UBERON:0002390,3.49e-52,98;UBERON:0003061,3.49e-52,98;UBERON:0001434,4.75e-51,100;UBERON:0002193,6.30e-47,108;UBERON:0002204,1.27e-28,167;UBERON:0003081,1.23e-22,203;UBERON:0000926,1.07e-12,315;UBERON:0004120,1.07e-12,315;UBERON:0006603,1.07e-12,315;UBERON:0002384,5.75e-12,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.464448369948228,0,0,0,0,0,0,0.553995408531877,1.20326668482085,0.651032612147555,0,0,0,1.59938062657521,1.51150377475524,4.12392904019288,2.78914844286822,2.46700732813095,5.26500830521676,5.17846306179871,5.37937483711111,3.78371567821736,7.23965929546899,5.16387746867061,6.77132432971709,1.88242339542605,0.818718450173537,3.14612878223118,14.6920268338033,4.49300637906531,5.75403413219137,1.31940520074686,3.39088217956774,3.83602275479425,12.4789972610291,3.97169657283798,6.22822248995575,6.53246529667532,5.73631210262222,7.60160956467908,9.6863920421339,2.94622108790052,7.27863491114034,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,1.17447437874188,0,0,0,0.263384084775077,0,0.393010762749165,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0.415440338029185,0,0.77380195455795,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.429642228169954,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0,0,0.38582807654183,0.337884881306145,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0.352894871715692,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.448527450322454,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p2@ACAD9 | |||
}} |
Latest revision as of 07:51, 20 September 2015
Short description: | p2@ACAD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACAD9_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -494bp_to_NM_014049, NR_033426, uc003ela.3, uc010hsw.1_5end |
EntrezGene: | ACAD9 |
HGNC: | 21497 |
UniProt: | Q9H845Q59FN3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.43e-130 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.43e-130 | 42 |
defensive cell | 5.80e-113 | 48 |
phagocyte | 5.80e-113 | 48 |
monopoietic cell | 2.22e-89 | 59 |
monocyte | 2.22e-89 | 59 |
monoblast | 2.22e-89 | 59 |
promonocyte | 2.22e-89 | 59 |
macrophage dendritic cell progenitor | 2.45e-86 | 61 |
myeloid lineage restricted progenitor cell | 1.60e-79 | 66 |
granulocyte monocyte progenitor cell | 2.80e-78 | 67 |
myeloid leukocyte | 1.42e-72 | 72 |
nongranular leukocyte | 5.91e-47 | 115 |
myeloid cell | 6.30e-47 | 108 |
common myeloid progenitor | 6.30e-47 | 108 |
hematopoietic lineage restricted progenitor cell | 8.42e-45 | 120 |
leukocyte | 5.80e-39 | 136 |
hematopoietic oligopotent progenitor cell | 3.83e-32 | 161 |
hematopoietic multipotent progenitor cell | 3.83e-32 | 161 |
hematopoietic stem cell | 1.36e-30 | 168 |
hematopoietic cell | 8.83e-29 | 177 |
mesenchymal cell | 8.31e-13 | 354 |
connective tissue cell | 1.88e-12 | 361 |
motile cell | 3.37e-11 | 386 |
multi fate stem cell | 1.15e-09 | 427 |
somatic stem cell | 1.88e-09 | 433 |
stem cell | 3.54e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.53e-68 | 76 |
bone element | 3.19e-63 | 82 |
skeletal element | 3.21e-57 | 90 |
immune system | 3.13e-55 | 93 |
hematopoietic system | 3.49e-52 | 98 |
blood island | 3.49e-52 | 98 |
skeletal system | 4.75e-51 | 100 |
hemolymphoid system | 6.30e-47 | 108 |
musculoskeletal system | 1.27e-28 | 167 |
lateral plate mesoderm | 1.23e-22 | 203 |
mesoderm | 1.07e-12 | 315 |
mesoderm-derived structure | 1.07e-12 | 315 |
presumptive mesoderm | 1.07e-12 | 315 |
connective tissue | 5.75e-12 | 371 |