FFCP PHASE1:Hg19::chr3:128597811..128597838,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28976 | |EntrezGene=28976 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21497 | |HGNC=21497 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H845,Q59FN3 | |UniProt=Q9H845,Q59FN3 | ||
|association_with_transcript=-494bp_to_NM_014049,NR_033426,uc003ela.3,uc010hsw.1_5end | |association_with_transcript=-494bp_to_NM_014049,NR_033426,uc003ela.3,uc010hsw.1_5end | ||
|cluster_id=chr3:128597811..128597838,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_ACAD9_5end | |description=CAGE_peak_2_at_ACAD9_5end | ||
|id=chr3:128597811..128597838,+ | |id=chr3:128597811..128597838,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.86e-52!42;CL:0000860!2.16e-50!45;CL:0002009!2.64e-36!65;CL:0002194!1.27e-35!63;CL:0000576!1.27e-35!63;CL:0000040!1.27e-35!63;CL:0000559!1.27e-35!63;CL:0000557!5.98e-34!71;CL:0000766!9.66e-33!76;CL:0000839!1.37e-32!70;CL:0002087!6.21e-22!119;CL:0000763!1.10e-21!112;CL:0000049!1.10e-21!112;CL:0002031!1.42e-21!124;CL:0000738!7.35e-21!140;CL:0002032!2.79e-16!165;CL:0000837!2.79e-16!165;CL:0000037!5.87e-16!172;CL:0000566!5.87e-16!172;CL:0000988!4.15e-15!182;CL:0000134!4.84e-10!358;CL:0002320!4.96e-10!365;CL:0000219!6.23e-09!390;CL:0000048!6.45e-09!430;CL:0000723!1.60e-08!436;CL:0000034!1.72e-08!444 | |ontology_enrichment_celltype=CL:0002057!3.86e-52!42;CL:0000860!2.16e-50!45;CL:0002009!2.64e-36!65;CL:0002194!1.27e-35!63;CL:0000576!1.27e-35!63;CL:0000040!1.27e-35!63;CL:0000559!1.27e-35!63;CL:0000557!5.98e-34!71;CL:0000766!9.66e-33!76;CL:0000839!1.37e-32!70;CL:0002087!6.21e-22!119;CL:0000763!1.10e-21!112;CL:0000049!1.10e-21!112;CL:0002031!1.42e-21!124;CL:0000738!7.35e-21!140;CL:0002032!2.79e-16!165;CL:0000837!2.79e-16!165;CL:0000037!5.87e-16!172;CL:0000566!5.87e-16!172;CL:0000988!4.15e-15!182;CL:0000134!4.84e-10!358;CL:0002320!4.96e-10!365;CL:0000219!6.23e-09!390;CL:0000048!6.45e-09!430;CL:0000723!1.60e-08!436;CL:0000034!1.72e-08!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.21e-141;33!CL:0002057;1.21e-141;33!CL:0000473;1.35e-99;39!CL:0000234;1.35e-99;39!CL:0000576;5.34e-66;48!CL:0000766;4.98e-37;69!CL:0002087;3.54e-19;104!CL:0000763;1.24e-18;100!CL:0000738;1.10e-10;136!CL:0000988;4.87e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.43e-130,42;CL:0002057,8.43e-130,42;CL:0000473,5.80e-113,48;CL:0000234,5.80e-113,48;CL:0002194,2.22e-89,59;CL:0000576,2.22e-89,59;CL:0000040,2.22e-89,59;CL:0000559,2.22e-89,59;CL:0002009,2.45e-86,61;CL:0000839,1.60e-79,66;CL:0000557,2.80e-78,67;CL:0000766,1.42e-72,72;CL:0002087,5.91e-47,115;CL:0000763,6.30e-47,108;CL:0000049,6.30e-47,108;CL:0002031,8.42e-45,120;CL:0000738,5.80e-39,136;CL:0002032,3.83e-32,161;CL:0000837,3.83e-32,161;CL:0000037,1.36e-30,168;CL:0000988,8.83e-29,177;CL:0000134,8.31e-13,354;CL:0002320,1.88e-12,361;CL:0000219,3.37e-11,386;CL:0000048,1.15e-09,427;CL:0000723,1.88e-09,433;CL:0000034,3.54e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.39e-95;42!CL:0000049;8.04e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.02e-28!80;UBERON:0001474!2.46e-27!86;UBERON:0002390!7.48e-25!102;UBERON:0003061!7.48e-25!102;UBERON:0002405!3.24e-24!115;UBERON:0002193!6.19e-24!112;UBERON:0004765!2.07e-21!101;UBERON:0001434!2.07e-21!101;UBERON:0002204!2.46e-10!167;UBERON:0002384!8.04e-10!375;UBERON:0003081!1.01e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.53e-68,76;UBERON:0001474,3.19e-63,82;UBERON:0004765,3.21e-57,90;UBERON:0002405,3.13e-55,93;UBERON:0002390,3.49e-52,98;UBERON:0003061,3.49e-52,98;UBERON:0001434,4.75e-51,100;UBERON:0002193,6.30e-47,108;UBERON:0002204,1.27e-28,167;UBERON:0003081,1.23e-22,203;UBERON:0000926,1.07e-12,315;UBERON:0004120,1.07e-12,315;UBERON:0006603,1.07e-12,315;UBERON:0002384,5.75e-12,371 | |||
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| ||
|short_description=p2@ACAD9 | |short_description=p2@ACAD9 | ||
}} | }} |
Latest revision as of 07:51, 20 September 2015
Short description: | p2@ACAD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACAD9_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -494bp_to_NM_014049, NR_033426, uc003ela.3, uc010hsw.1_5end |
EntrezGene: | ACAD9 |
HGNC: | 21497 |
UniProt: | Q9H845Q59FN3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.43e-130 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.43e-130 | 42 |
defensive cell | 5.80e-113 | 48 |
phagocyte | 5.80e-113 | 48 |
monopoietic cell | 2.22e-89 | 59 |
monocyte | 2.22e-89 | 59 |
monoblast | 2.22e-89 | 59 |
promonocyte | 2.22e-89 | 59 |
macrophage dendritic cell progenitor | 2.45e-86 | 61 |
myeloid lineage restricted progenitor cell | 1.60e-79 | 66 |
granulocyte monocyte progenitor cell | 2.80e-78 | 67 |
myeloid leukocyte | 1.42e-72 | 72 |
nongranular leukocyte | 5.91e-47 | 115 |
myeloid cell | 6.30e-47 | 108 |
common myeloid progenitor | 6.30e-47 | 108 |
hematopoietic lineage restricted progenitor cell | 8.42e-45 | 120 |
leukocyte | 5.80e-39 | 136 |
hematopoietic oligopotent progenitor cell | 3.83e-32 | 161 |
hematopoietic multipotent progenitor cell | 3.83e-32 | 161 |
hematopoietic stem cell | 1.36e-30 | 168 |
hematopoietic cell | 8.83e-29 | 177 |
mesenchymal cell | 8.31e-13 | 354 |
connective tissue cell | 1.88e-12 | 361 |
motile cell | 3.37e-11 | 386 |
multi fate stem cell | 1.15e-09 | 427 |
somatic stem cell | 1.88e-09 | 433 |
stem cell | 3.54e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.53e-68 | 76 |
bone element | 3.19e-63 | 82 |
skeletal element | 3.21e-57 | 90 |
immune system | 3.13e-55 | 93 |
hematopoietic system | 3.49e-52 | 98 |
blood island | 3.49e-52 | 98 |
skeletal system | 4.75e-51 | 100 |
hemolymphoid system | 6.30e-47 | 108 |
musculoskeletal system | 1.27e-28 | 167 |
lateral plate mesoderm | 1.23e-22 | 203 |
mesoderm | 1.07e-12 | 315 |
mesoderm-derived structure | 1.07e-12 | 315 |
presumptive mesoderm | 1.07e-12 | 315 |
connective tissue | 5.75e-12 | 371 |