FFCP PHASE1:Hg19::chr5:133477868..133477885,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6932 | |EntrezGene=6932 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11639 | |HGNC=11639 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000517855_5end | |association_with_transcript=0bp_to_ENST00000517855_5end | ||
|cluster_id=chr5:133477868..133477885,+ | |||
|coexpression_cluster_id=C1525 | |coexpression_cluster_id=C1525 | ||
|description=CAGE_peak_13_at_TCF7_5end | |description=CAGE_peak_13_at_TCF7_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000084!6.19e-14!25;CL:0000827!6.19e-14!25;CL:0000542!9.87e-13!53;CL:0000051!9.87e-13!53;CL:0000838!5.69e-12!52;CL:0000791!2.64e-11!18;CL:0000789!2.64e-11!18;CL:0002420!2.64e-11!18;CL:0002419!2.64e-11!18;CL:0000790!2.64e-11!18;CL:0000624!2.97e-07!6;CL:0000625!8.15e-07!11 | |ontology_enrichment_celltype=CL:0000084!6.19e-14!25;CL:0000827!6.19e-14!25;CL:0000542!9.87e-13!53;CL:0000051!9.87e-13!53;CL:0000838!5.69e-12!52;CL:0000791!2.64e-11!18;CL:0000789!2.64e-11!18;CL:0002420!2.64e-11!18;CL:0002419!2.64e-11!18;CL:0000790!2.64e-11!18;CL:0000624!2.97e-07!6;CL:0000625!8.15e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000226;2.34e-14;3!CL:0000842;2.34e-14;3!CL:0000084;4.85e-14;25!CL:0000791;4.07e-09;18!CL:0000789;4.07e-09;18!CL:0002419;4.07e-09;18!CL:0000624;1.01e-07;6 | |ontology_enrichment_celltype_v019=CL:0000226;2.34e-14;3!CL:0000842;2.34e-14;3!CL:0000084;4.85e-14;25!CL:0000791;4.07e-09;18!CL:0000789;4.07e-09;18!CL:0002419;4.07e-09;18!CL:0000624;1.01e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000226,3.17e-14,3;CL:0000842,3.17e-14,3;CL:0000084,4.74e-14,25;CL:0000827,4.74e-14,25;CL:0000791,3.70e-09,18;CL:0000789,3.70e-09,18;CL:0002420,3.70e-09,18;CL:0002419,3.70e-09,18;CL:0000790,3.70e-09,18;CL:0000838,1.01e-08,52;CL:0000542,1.52e-08,53;CL:0000051,1.52e-08,53;CL:0000624,9.26e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;4.07e-09;18 | |ontology_enrichment_development_v019=CL:0000790;4.07e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.78e-07!7 | |ontology_enrichment_uberon=UBERON:0004177!4.78e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.94e-21;2!UBERON:0005058;4.94e-21;2!UBERON:0009113;4.94e-21;2!UBERON:0000178;6.66e-11;15!UBERON:0000179;6.66e-11;15!UBERON:0000463;6.66e-11;15!UBERON:0002390;6.42e-10;32!UBERON:0004177;5.60e-09;5!UBERON:0005057;5.60e-09;5!UBERON:0002193;6.92e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0002370;4.94e-21;2!UBERON:0005058;4.94e-21;2!UBERON:0009113;4.94e-21;2!UBERON:0000178;6.66e-11;15!UBERON:0000179;6.66e-11;15!UBERON:0000463;6.66e-11;15!UBERON:0002390;6.42e-10;32!UBERON:0004177;5.60e-09;5!UBERON:0005057;5.60e-09;5!UBERON:0002193;6.92e-07;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.44e-11,4;UBERON:0005058,5.44e-11,4;UBERON:0009113,5.44e-11,4;UBERON:0003295,5.44e-11,4;UBERON:0005562,5.44e-11,4;UBERON:0000178,7.30e-11,15;UBERON:0000179,7.30e-11,15;UBERON:0000463,7.30e-11,15;UBERON:0003351,1.29e-07,6 | |||
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| ||
|short_description=p13@TCF7 | |short_description=p13@TCF7 | ||
}} | }} |
Latest revision as of 07:47, 20 September 2015
Short description: | p13@TCF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TCF7_5end |
Coexpression cluster: | C1525_Hodgkin_chronic_CD4_thymus_Whole_blood_acute |
Association with transcript: | 0bp_to_ENST00000517855_5end |
EntrezGene: | TCF7 |
HGNC: | 11639 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
single nucleate cell | 3.17e-14 | 3 |
mononuclear cell | 3.17e-14 | 3 |
T cell | 4.74e-14 | 25 |
pro-T cell | 4.74e-14 | 25 |
mature alpha-beta T cell | 3.70e-09 | 18 |
alpha-beta T cell | 3.70e-09 | 18 |
immature T cell | 3.70e-09 | 18 |
mature T cell | 3.70e-09 | 18 |
immature alpha-beta T cell | 3.70e-09 | 18 |
lymphoid lineage restricted progenitor cell | 1.01e-08 | 52 |
lymphocyte | 1.52e-08 | 53 |
common lymphoid progenitor | 1.52e-08 | 53 |
CD4-positive, alpha-beta T cell | 9.26e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.44e-11 | 4 |
hemolymphoid system gland | 5.44e-11 | 4 |
thymic region | 5.44e-11 | 4 |
pharyngeal gland | 5.44e-11 | 4 |
thymus primordium | 5.44e-11 | 4 |
blood | 7.30e-11 | 15 |
haemolymphatic fluid | 7.30e-11 | 15 |
organism substance | 7.30e-11 | 15 |
pharyngeal epithelium | 1.29e-07 | 6 |