FFCP PHASE1:Hg19::chr7:100201103..100201120,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5118 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8738 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-288bp_to_ENST00000482863_5end | |||
|cluster_id=chr7:100201103..100201120,+ | |||
|coexpression_cluster_id=C1982 | |||
|description=CAGE_peak_3_at_PCOLCE_5end | |||
|id=chr7:100201103..100201120,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.66e-51!180;CL:0000057!2.08e-29!75;CL:0000680!4.72e-20!57;CL:0000056!4.72e-20!57;CL:0000355!4.72e-20!57;CL:0000183!1.14e-19!59;CL:0000187!4.19e-19!54;CL:0000393!4.87e-18!60;CL:0000211!4.87e-18!60;CL:0000192!3.41e-14!42;CL:0000514!3.41e-14!42;CL:0002620!8.07e-14!23;CL:0000048!4.60e-13!430;CL:0000723!5.44e-12!436;CL:0000034!1.12e-11!444;CL:0000359!6.43e-10!32;CL:0002494!7.25e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.11e-15;23!CL:0000187;1.95e-12;55!CL:0000057;5.67e-12;73!CL:0000192;3.07e-11;43!CL:0000393;1.06e-10;61!CL:0000211;1.06e-10;61!CL:0000134;2.09e-10;55!CL:0002320;2.77e-10;188!CL:0000723;6.81e-10;61!CL:0000359;7.14e-10;32!CL:0000048;3.46e-09;58!CL:0000499;1.04e-07;28!CL:0002494;1.11e-07;16!CL:0000034;1.30e-07;69!CL:0002570;5.60e-07;8!CL:0000327;6.18e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.02e-31,76;CL:0000680,2.65e-22,58;CL:0000056,2.65e-22,58;CL:0000355,2.65e-22,58;CL:0000048,2.43e-21,427;CL:0000187,3.31e-21,55;CL:0000723,3.64e-20,433;CL:0000034,2.21e-19,441;CL:0000393,5.25e-19,61;CL:0000211,5.25e-19,61;CL:0002620,1.01e-15,23;CL:0000192,1.45e-15,43;CL:0000514,1.45e-15,43;CL:0000359,3.82e-10,32;CL:0002320,4.35e-10,361;CL:0000134,8.35e-08,354;CL:0002494,1.08e-07,16;CL:0000499,1.18e-07,28;CL:0000219,1.54e-07,386;CL:0002570,5.72e-07,8;CL:0000327,7.06e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000355;3.68e-12;58!CL:0000514;3.07e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.55e-26!83;UBERON:0002329!5.55e-26!83;UBERON:0003077!5.55e-26!83;UBERON:0003059!5.55e-26!83;UBERON:0007282!5.55e-26!83;UBERON:0009618!5.55e-26!83;UBERON:0007285!5.55e-26!83;UBERON:0004290!3.84e-24!70;UBERON:0002385!2.84e-20!63;UBERON:0001015!2.84e-20!63;UBERON:0000383!2.84e-20!63;UBERON:0001134!3.26e-20!61;UBERON:0002036!3.26e-20!61;UBERON:0003082!3.26e-20!61;UBERON:0000486!1.11e-19!82;UBERON:0005256!8.72e-16!143;UBERON:0003102!7.83e-12!95;UBERON:0002199!1.53e-11!45;UBERON:0002416!1.53e-11!45;UBERON:0000475!1.79e-11!365;UBERON:0002100!8.98e-10!216;UBERON:0002097!2.02e-09!40;UBERON:0000479!1.50e-08!787;UBERON:0001013!2.58e-08!14;UBERON:0000481!3.09e-08!347;UBERON:0000468!3.31e-08!659;UBERON:0000948!5.49e-08!24;UBERON:0005498!5.49e-08!24;UBERON:0004140!5.49e-08!24;UBERON:0009881!5.49e-08!24;UBERON:0004141!5.49e-08!24;UBERON:0003084!5.49e-08!24;UBERON:0007005!5.49e-08!24;UBERON:0004139!5.49e-08!24;UBERON:0004291!5.49e-08!24;UBERON:0004872!7.72e-08!84;UBERON:0003104!1.91e-07!238;UBERON:0009142!1.91e-07!238;UBERON:0007100!2.87e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;8.72e-12;31!UBERON:0001015;8.72e-12;31!UBERON:0000383;8.72e-12;31!UBERON:0002384;1.15e-10;198!UBERON:0002204;2.91e-10;70!UBERON:0001013;2.08e-09;14!UBERON:0002199;3.05e-09;46!UBERON:0002416;3.05e-09;46!UBERON:0002097;8.50e-09;41!UBERON:0003102;9.77e-08;50!UBERON:0004905;1.27e-07;8!UBERON:0000982;1.27e-07;8!UBERON:0004770;1.27e-07;8!UBERON:0001135;5.90e-07;15!UBERON:0001434;6.99e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.15e-26,73;UBERON:0002329,1.48e-26,71;UBERON:0003059,1.48e-26,71;UBERON:0007282,1.48e-26,71;UBERON:0004290,1.48e-26,71;UBERON:0009618,1.48e-26,71;UBERON:0003077,7.64e-26,72;UBERON:0007285,7.64e-26,72;UBERON:0007503,9.59e-23,78;UBERON:0000486,1.43e-22,83;UBERON:0001134,4.72e-22,62;UBERON:0002036,4.72e-22,62;UBERON:0003082,4.72e-22,62;UBERON:0002385,1.29e-21,64;UBERON:0001015,1.29e-21,64;UBERON:0000383,1.29e-21,64;UBERON:0005256,1.97e-17,122;UBERON:0003104,2.05e-17,160;UBERON:0009142,2.05e-17,160;UBERON:0002199,3.69e-14,46;UBERON:0002416,3.69e-14,46;UBERON:0003102,1.10e-12,99;UBERON:0002097,1.16e-11,41;UBERON:0002384,1.84e-10,371;UBERON:0001013,2.31e-09,14;UBERON:0000490,3.12e-09,148;UBERON:0000479,5.40e-09,773;UBERON:0002204,1.37e-08,167;UBERON:0000926,2.10e-08,315;UBERON:0004120,2.10e-08,315;UBERON:0006603,2.10e-08,315;UBERON:0004905,1.42e-07,8;UBERON:0000982,1.42e-07,8;UBERON:0004770,1.42e-07,8;UBERON:0004872,1.81e-07,83;UBERON:0000948,3.04e-07,24;UBERON:0005498,3.04e-07,24;UBERON:0004140,3.04e-07,24;UBERON:0009881,3.04e-07,24;UBERON:0004141,3.04e-07,24;UBERON:0003084,3.04e-07,24;UBERON:0007005,3.04e-07,24;UBERON:0004139,3.04e-07,24;UBERON:0004291,3.04e-07,24;UBERON:0004573,3.54e-07,33;UBERON:0004571,3.54e-07,33;UBERON:0002100,3.92e-07,199;UBERON:0001637,4.60e-07,42;UBERON:0003509,4.60e-07,42;UBERON:0004572,4.60e-07,42;UBERON:0001135,5.97e-07,15 | |||
|phase1_expression=4.72363786103447,11.5614282901131,1.9733616573436,14.0102617694383,5.36353313312745,20.9361245784089,7.59899634504932,4.42203911398782,10.7086107561934,0,0,0,0,25.8671677686497,57.0003486252015,24.2037052722639,26.518559233055,21.9093027116212,12.1983199697627,0.369363174230364,6.9360235023046,1.56727360739044,0.286235987131057,0.136874425072884,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,5.36560687762909,1.66221330396589,16.62620100969,5.0133791063589,21.7269778441236,1.5905718941022,15.5723158496843,0.472674085820339,0.665188192387692,0.43917392846563,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9212707440783,15.1956613997496,3.70745706277013,116.742504644767,24.4721183716866,3.36406560085384,2.1349799145941,4.19334832309172,2.8008993185979,5.52313755485721,11.769257024169,8.77873080340602,24.19938882816,1.64025002283658,16.2323239951767,2.2818872861778,15.0943167357319,9.74706338743249,9.38863077335163,9.69110566245515,7.96201267894084,16.0912955678416,24.2815585763049,19.0080457165129,51.1842543606613,1.82032272387605,23.7143986799359,3.19838616512726,12.2616149474525,1.10825646193673,13.1693286264251,37.6979988832794,26.1414222497478,1.58805056424029,39.4657198515496,21.3557388818567,11.6562545637759,46.214028796998,24.1142918417947,44.8294539679395,16.0060496445167,15.6961988984378,28.6464795173924,31.8066555547584,18.2258799311753,47.5239407047307,50.0563525448426,12.594012278455,5.76506013855658,0,0,0,0.365921118388786,0,1.2781333715647,1.14027160516907,0.252320850875628,0,4.69348596989448,76.5456716449533,2.76269842704961,18.5747171212792,38.259612528488,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,23.5213938216867,1.26755034821831,0,3.54473944008842,0,0.122988438543114,0.686271241194102,0,0,0,0,0.977424915930974,9.35941306751621,0,0.115930404975077,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.414656231081544,0,0,0.126995788584338,0,0,0,1.54241239054985,0,0,2.80327710863402,8.28324130783232,5.1336800074665,3.36106460970222,89.4141114629706,11.834238535784,13.0309677126587,9.36066932202295,5.91576960802927,4.25547396069835,11.7225758767084,3.14551586047925,30.9294315073123,14.8183260620538,4.23457039581856,3.909311436168,15.8390374586686,0,0,0,0,0,0,1.4377491329495,5.7430967917057,1.42636905040718,3.4747513600219,14.3833425785268,1.96967059563885,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,45.1504689526435,57.0194394008032,23.8713220855767,15.3898437532797,28.3702092187487,20.1859091243436,9.72273744439519,4.8151375956435,52.3037259328765,30.0071906748264,5.31380478828349,6.63729006750131,10.8604518085104,25.2583493126935,56.6186649287912,0,0,0,0,1.66435439510497,1.5119514666484,1.48864684691266,3.52962538562544,20.2075267991813,2.17836553734692,1.53512174720011,0.965123526861645,11.8734453155993,16.1920178492788,28.9425612260397,4.35273926873188,24.9242126008138,23.5907068273717,0.241718899183244,0,0,8.38145471601629,24.0360341768866,28.1917492162762,0,0,0,0,0,0,0,0,0,0.270946437543853,1.50506932156456,0,0,0,0,0,0,0,0.650756789328606,1.75169719801128,15.3836700894817,3.13536099698234,0,0,4.82051789532479,5.12354806948246,20.9506119275916,25.0210989803591,11.3025989437315,19.1208035865527,35.8191233968144,9.8010621528516,3.73934549716297,0,0.192190067365106,0,0.2023155617111,1.85938219718914,68.6290916090795,1.3940745403212,4.62050370264133,2.12922412126809,2.60979897622522,3.7064843820784,1.14499909393593,4.46590043231601,2.84741482246853,1.71567174531442,7.93283153065135,14.5499255931533,11.7735201732597,11.7742296029885,7.73451567608253,17.2958328733715,11.0743658204945,1.61745985258653,3.17020642346017,7.16139375606268,2.43816869544795,11.2108205230391,11.6215161432431,8.32649459588713,17.6756789942141,21.4715421578461,2.2054613741845,0.66343897524122,0,8.10285747973363,24.2681058257254,1.01455188481352,4.64735247149625,11.2678241012897,2.00775893085672,4.42120684559045,0.35667105148125,8.86902660176495,46.0214644948908,67.17615816382,6.07157078025144,22.7457568159239,0,1.34060455107157,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,2.45695363593188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0.994147647766298,0,0,0,0,2.59022384726391,1.93398740871803,0,0,0,1.24415835064723,0,0,0,0.986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0.344743373241465,0,0.520874984799877,0,0,0,0,0.295547618953547,1.31631238292384,1.74301541630384,0,6.69467248983034,0,0,0,0,0,10.3505280544104,2.13213910407454,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0.995261931078505,0.619202951523374,1.22206028986725,0,0,0,0.134802265961354,6.42062117839031,0,0,0,0,1.57833761139756,0,1.53036380815245,2.78020950365347,0,0,0,0,0,0,0,0.138674673013139,0,0,0,16.7737601512349,1.0319161948297,0,0,0,0.775912131907355,0,7.9093259273186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| |||
|short_description=p3@PCOLCE | |||
}} |
Latest revision as of 07:42, 20 September 2015
Short description: | p3@PCOLCE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PCOLCE_5end |
Coexpression cluster: | C1982_Fibroblast_Mesenchymal_tenocyte_Hair_normal_Synoviocyte_mesenchymal |
Association with transcript: | -288bp_to_ENST00000482863_5end |
EntrezGene: | PCOLCE |
HGNC: | 8738 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.02e-31 | 76 |
muscle precursor cell | 2.65e-22 | 58 |
myoblast | 2.65e-22 | 58 |
multi-potent skeletal muscle stem cell | 2.65e-22 | 58 |
multi fate stem cell | 2.43e-21 | 427 |
muscle cell | 3.31e-21 | 55 |
somatic stem cell | 3.64e-20 | 433 |
stem cell | 2.21e-19 | 441 |
electrically responsive cell | 5.25e-19 | 61 |
electrically active cell | 5.25e-19 | 61 |
skin fibroblast | 1.01e-15 | 23 |
smooth muscle cell | 1.45e-15 | 43 |
smooth muscle myoblast | 1.45e-15 | 43 |
vascular associated smooth muscle cell | 3.82e-10 | 32 |
connective tissue cell | 4.35e-10 | 361 |
mesenchymal cell | 8.35e-08 | 354 |
cardiocyte | 1.08e-07 | 16 |
stromal cell | 1.18e-07 | 28 |
motile cell | 1.54e-07 | 386 |
mesenchymal stem cell of adipose | 5.72e-07 | 8 |
extracellular matrix secreting cell | 7.06e-07 | 15 |