FFCP PHASE1:Hg19::chr1:207286360..207286386,+: Difference between revisions
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|id=chr1:207286360..207286386,+
|short_description=p6@C4BPA
|description=CAGE_peak_6_at_C4BPA_5end
|association_with_transcript=0bp_to_AB590286,DQ892021,DQ895213,X0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=722 | |EntrezGene=722 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1325 | |HGNC=1325 | ||
|TSSclassifier=strong | |||
|UniProt=P04003 | |UniProt=P04003 | ||
|association_with_transcript=0bp_to_AB590286,DQ892021,DQ895213,X07853_5end | |||
|cluster_id=chr1:207286360..207286386,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_C4BPA_5end | |||
|id=chr1:207286360..207286386,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.09e-16!12;CL:0000417!4.09e-16!12;CL:0000668!4.09e-16!12;CL:0000414!4.09e-16!12;CL:0000412!4.09e-16!12;CL:0000182!4.09e-16!12;CL:0002195!4.17e-07!2;CL:0002571!4.17e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.46e-17;12!CL:0000775;1.51e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.46e-17,12;CL:0000775,1.51e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.97e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.94e-22!19;UBERON:0006925!3.94e-22!19;UBERON:0008836!3.94e-22!19;UBERON:0008835!4.46e-19!22;UBERON:0003894!4.46e-19!22;UBERON:0009854!3.10e-18!23;UBERON:0007499!9.40e-17!25;UBERON:0009497!9.40e-17!25;UBERON:0000015!9.40e-17!25;UBERON:0002423!9.40e-17!25;UBERON:0006235!9.40e-17!25;UBERON:0004161!9.40e-17!25;UBERON:0005057!4.26e-16!26;UBERON:0009856!4.26e-16!26;UBERON:0002365!1.89e-13!31;UBERON:0002330!1.89e-13!31;UBERON:0002171!3.33e-13!1;UBERON:0006518!3.33e-13!1;UBERON:0008949!3.33e-13!1;UBERON:0000101!3.33e-13!1;UBERON:0002167!3.33e-13!1;UBERON:0002363!1.09e-12!1;UBERON:0007647!1.09e-12!1;UBERON:0010115!1.09e-12!1;UBERON:0002368!7.13e-12!35;UBERON:0005911!1.37e-10!82;UBERON:0003929!4.11e-10!54;UBERON:0002530!3.35e-09!59;UBERON:0000949!3.75e-09!45;UBERON:0001041!1.08e-08!98;UBERON:0000466!4.57e-08!126;UBERON:0005177!7.20e-08!107;UBERON:0000077!8.75e-08!130;UBERON:0004921!8.75e-08!129;UBERON:0004185!8.75e-08!129;UBERON:0005172!2.05e-07!55;UBERON:0005173!2.05e-07!55;UBERON:0009569!2.16e-07!113;UBERON:0003127!3.93e-07!2;UBERON:0002360!5.60e-07!2;UBERON:0000094!5.60e-07!2;UBERON:0007645!5.60e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;4.10e-23;1!UBERON:0006518;4.10e-23;1!UBERON:0008949;4.10e-23;1!UBERON:0000101;4.10e-23;1!UBERON:0002167;4.10e-23;1!UBERON:0002107;3.82e-19;19!UBERON:0006925;3.82e-19;19!UBERON:0002423;1.15e-14;25!UBERON:0002365;2.72e-12;31!UBERON:0002330;2.72e-12;31!UBERON:0002368;5.93e-10;33!UBERON:0000949;2.09e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,4.10e-23,1;UBERON:0006518,4.10e-23,1;UBERON:0008949,4.10e-23,1;UBERON:0000101,4.10e-23,1;UBERON:0002167,4.10e-23,1;UBERON:0002107,3.82e-19,19;UBERON:0006925,3.82e-19,19;UBERON:0008836,3.82e-19,19;UBERON:0008835,1.33e-16,22;UBERON:0003894,1.33e-16,22;UBERON:0009854,6.71e-16,23;UBERON:0007499,1.15e-14,25;UBERON:0009497,1.15e-14,25;UBERON:0000015,1.15e-14,25;UBERON:0002423,1.15e-14,25;UBERON:0006235,1.15e-14,25;UBERON:0004161,1.15e-14,25;UBERON:0009856,4.06e-14,26;UBERON:0002365,6.57e-12,31;UBERON:0002330,6.57e-12,31;UBERON:0002368,1.36e-10,35;UBERON:0005911,1.02e-09,82;UBERON:0001041,3.73e-09,87;UBERON:0000949,2.57e-08,45;UBERON:0005177,7.10e-08,101;UBERON:0009569,4.32e-07,112;UBERON:0003929,5.55e-07,54;UBERON:0005172,5.55e-07,54;UBERON:0005173,5.55e-07,54 | |||
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|short_description=p6@C4BPA | |||
}} | }} |
Latest revision as of 07:29, 20 September 2015
Short description: | p6@C4BPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_C4BPA_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_AB590286, DQ892021, DQ895213, X07853_5end |
EntrezGene: | C4BPA |
HGNC: | 1325 |
UniProt: | P04003 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.46e-17 | 12 |
neutrophil | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 4.10e-23 | 1 |
right lung lobe | 4.10e-23 | 1 |
lower lobe of lung | 4.10e-23 | 1 |
lobe of lung | 4.10e-23 | 1 |
right lung | 4.10e-23 | 1 |
liver | 3.82e-19 | 19 |
digestive gland | 3.82e-19 | 19 |
liver bud | 3.82e-19 | 19 |
hepatic diverticulum | 1.33e-16 | 22 |
liver primordium | 1.33e-16 | 22 |
digestive tract diverticulum | 6.71e-16 | 23 |
epithelial sac | 1.15e-14 | 25 |
epithelium of foregut-midgut junction | 1.15e-14 | 25 |
anatomical boundary | 1.15e-14 | 25 |
hepatobiliary system | 1.15e-14 | 25 |
foregut-midgut junction | 1.15e-14 | 25 |
septum transversum | 1.15e-14 | 25 |
sac | 4.06e-14 | 26 |
exocrine gland | 6.57e-12 | 31 |
exocrine system | 6.57e-12 | 31 |
endocrine gland | 1.36e-10 | 35 |
endo-epithelium | 1.02e-09 | 82 |
foregut | 3.73e-09 | 87 |
endocrine system | 2.57e-08 | 45 |
trunk region element | 7.10e-08 | 101 |
subdivision of trunk | 4.32e-07 | 112 |
gut epithelium | 5.55e-07 | 54 |
abdomen element | 5.55e-07 | 54 |
abdominal segment element | 5.55e-07 | 54 |