FFCP PHASE1:Hg19::chr1:207277542..207277554,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=722 | |EntrezGene=722 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1325 | |HGNC=1325 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_uc001hfn.1_5end | |association_with_transcript=31bp_to_uc001hfn.1_5end | ||
|cluster_id=chr1:207277542..207277554,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_7_at_C4BPA_5end | |description=CAGE_peak_7_at_C4BPA_5end | ||
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|ontology_enrichment_celltype=CL:0002150!6.20e-19!3;CL:0000861!6.20e-19!3;CL:0000181!3.45e-13!12;CL:0000417!3.45e-13!12;CL:0000668!3.45e-13!12;CL:0000414!3.45e-13!12;CL:0000412!3.45e-13!12;CL:0000182!3.45e-13!12;CL:0000775!9.14e-10!3;CL:0000094!8.83e-08!8 | |ontology_enrichment_celltype=CL:0002150!6.20e-19!3;CL:0000861!6.20e-19!3;CL:0000181!3.45e-13!12;CL:0000417!3.45e-13!12;CL:0000668!3.45e-13!12;CL:0000414!3.45e-13!12;CL:0000412!3.45e-13!12;CL:0000182!3.45e-13!12;CL:0000775!9.14e-10!3;CL:0000094!8.83e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000775;2.28e-21;3!CL:0000182;2.75e-12;12!CL:0000094;1.29e-08;8 | |ontology_enrichment_celltype_v019=CL:0000775;2.28e-21;3!CL:0000182;2.75e-12;12!CL:0000094;1.29e-08;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.96e-21,3;CL:0000182,2.75e-12,12;CL:0000094,1.22e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.86e-08;30 | |ontology_enrichment_development_v019=UBERON:0001041;1.86e-08;30 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.16e-16!19;UBERON:0006925!9.16e-16!19;UBERON:0008836!9.16e-16!19;UBERON:0005057!1.58e-14!26;UBERON:0008835!1.70e-13!22;UBERON:0003894!1.70e-13!22;UBERON:0009854!7.15e-13!23;UBERON:0007499!8.99e-12!25;UBERON:0009497!8.99e-12!25;UBERON:0000015!8.99e-12!25;UBERON:0002423!8.99e-12!25;UBERON:0006235!8.99e-12!25;UBERON:0004161!8.99e-12!25;UBERON:0009856!2.76e-11!26;UBERON:0002365!2.53e-09!31;UBERON:0002330!2.53e-09!31;UBERON:0005911!6.27e-09!82;UBERON:0001041!2.03e-08!98;UBERON:0002368!3.71e-08!35;UBERON:0002171!6.37e-08!1;UBERON:0006518!6.37e-08!1;UBERON:0008949!6.37e-08!1;UBERON:0000101!6.37e-08!1;UBERON:0002167!6.37e-08!1;UBERON:0005177!1.67e-07!107;UBERON:0002363!2.98e-07!1;UBERON:0007647!2.98e-07!1;UBERON:0010115!2.98e-07!1;UBERON:0009569!5.63e-07!113;UBERON:0000077!8.64e-07!130;UBERON:0004921!8.64e-07!129;UBERON:0004185!8.64e-07!129 | |ontology_enrichment_uberon=UBERON:0002107!9.16e-16!19;UBERON:0006925!9.16e-16!19;UBERON:0008836!9.16e-16!19;UBERON:0005057!1.58e-14!26;UBERON:0008835!1.70e-13!22;UBERON:0003894!1.70e-13!22;UBERON:0009854!7.15e-13!23;UBERON:0007499!8.99e-12!25;UBERON:0009497!8.99e-12!25;UBERON:0000015!8.99e-12!25;UBERON:0002423!8.99e-12!25;UBERON:0006235!8.99e-12!25;UBERON:0004161!8.99e-12!25;UBERON:0009856!2.76e-11!26;UBERON:0002365!2.53e-09!31;UBERON:0002330!2.53e-09!31;UBERON:0005911!6.27e-09!82;UBERON:0001041!2.03e-08!98;UBERON:0002368!3.71e-08!35;UBERON:0002171!6.37e-08!1;UBERON:0006518!6.37e-08!1;UBERON:0008949!6.37e-08!1;UBERON:0000101!6.37e-08!1;UBERON:0002167!6.37e-08!1;UBERON:0005177!1.67e-07!107;UBERON:0002363!2.98e-07!1;UBERON:0007647!2.98e-07!1;UBERON:0010115!2.98e-07!1;UBERON:0009569!5.63e-07!113;UBERON:0000077!8.64e-07!130;UBERON:0004921!8.64e-07!129;UBERON:0004185!8.64e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.68e-20;19!UBERON:0006925;2.68e-20;19!UBERON:0002171;1.21e-16;1!UBERON:0006518;1.21e-16;1!UBERON:0008949;1.21e-16;1!UBERON:0000101;1.21e-16;1!UBERON:0002167;1.21e-16;1!UBERON:0002423;1.89e-15;25!UBERON:0002365;1.87e-12;31!UBERON:0002330;1.87e-12;31!UBERON:0002368;8.47e-11;33!UBERON:0000949;6.12e-08;43 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.68e-20;19!UBERON:0006925;2.68e-20;19!UBERON:0002171;1.21e-16;1!UBERON:0006518;1.21e-16;1!UBERON:0008949;1.21e-16;1!UBERON:0000101;1.21e-16;1!UBERON:0002167;1.21e-16;1!UBERON:0002423;1.89e-15;25!UBERON:0002365;1.87e-12;31!UBERON:0002330;1.87e-12;31!UBERON:0002368;8.47e-11;33!UBERON:0000949;6.12e-08;43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.73e-20,19;UBERON:0006925,2.73e-20,19;UBERON:0008836,2.73e-20,19;UBERON:0008835,1.54e-17,22;UBERON:0003894,1.54e-17,22;UBERON:0009854,8.85e-17,23;UBERON:0002171,1.21e-16,1;UBERON:0006518,1.21e-16,1;UBERON:0008949,1.21e-16,1;UBERON:0000101,1.21e-16,1;UBERON:0002167,1.21e-16,1;UBERON:0007499,1.92e-15,25;UBERON:0009497,1.92e-15,25;UBERON:0000015,1.92e-15,25;UBERON:0002423,1.92e-15,25;UBERON:0006235,1.92e-15,25;UBERON:0004161,1.92e-15,25;UBERON:0009856,7.49e-15,26;UBERON:0002365,1.83e-12,31;UBERON:0002330,1.83e-12,31;UBERON:0002368,4.84e-11,35;UBERON:0005911,9.63e-09,82;UBERON:0000949,1.39e-08,45;UBERON:0001041,3.28e-08,87;UBERON:0003929,3.82e-07,54;UBERON:0005172,3.82e-07,54;UBERON:0005173,3.82e-07,54;UBERON:0005177,5.34e-07,101 | |||
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|short_description=p7@C4BPA | |short_description=p7@C4BPA | ||
}} | }} |
Latest revision as of 07:22, 20 September 2015
Short description: | p7@C4BPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_C4BPA_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 31bp_to_uc001hfn.1_5end |
EntrezGene: | C4BPA |
HGNC: | 1325 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.96e-21 | 3 |
hepatocyte | 2.75e-12 | 12 |
granulocyte | 1.22e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
liver | 2.73e-20 | 19 |
digestive gland | 2.73e-20 | 19 |
liver bud | 2.73e-20 | 19 |
hepatic diverticulum | 1.54e-17 | 22 |
liver primordium | 1.54e-17 | 22 |
digestive tract diverticulum | 8.85e-17 | 23 |
lower lobe of right lung | 1.21e-16 | 1 |
right lung lobe | 1.21e-16 | 1 |
lower lobe of lung | 1.21e-16 | 1 |
lobe of lung | 1.21e-16 | 1 |
right lung | 1.21e-16 | 1 |
epithelial sac | 1.92e-15 | 25 |
epithelium of foregut-midgut junction | 1.92e-15 | 25 |
anatomical boundary | 1.92e-15 | 25 |
hepatobiliary system | 1.92e-15 | 25 |
foregut-midgut junction | 1.92e-15 | 25 |
septum transversum | 1.92e-15 | 25 |
sac | 7.49e-15 | 26 |
exocrine gland | 1.83e-12 | 31 |
exocrine system | 1.83e-12 | 31 |
endocrine gland | 4.84e-11 | 35 |
endo-epithelium | 9.63e-09 | 82 |
endocrine system | 1.39e-08 | 45 |
foregut | 3.28e-08 | 87 |
gut epithelium | 3.82e-07 | 54 |
abdomen element | 3.82e-07 | 54 |
abdominal segment element | 3.82e-07 | 54 |
trunk region element | 5.34e-07 | 101 |